RNA–Protein interactions for RNA: ENST00000606499.1

MSH6-211, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 833 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-211ENST00000606499 GLRX5Q86SX6 157 aa7.42□□□□□ -1.22
MSH6-211ENST00000606499 ALYREFQ86V81 257 aaKnown RBP7.42□□□□□ -1.22
MSH6-211ENST00000606499 THOC6Q86W42 341 aaKnown RBP7.42□□□□□ -1.22
MSH6-211ENST00000606499 C10orf107Q8IVU9 208 aa7.42□□□□□ -1.22
MSH6-211ENST00000606499 KLHDC8AQ8IYD2 350 aa7.42□□□□□ -1.22
MSH6-211ENST00000606499 TCAIMQ8N3R3 496 aa7.42□□□□□ -1.22
MSH6-211ENST00000606499 OR2A1Q8NGT9 310 aa7.42□□□□□ -1.22
MSH6-211ENST00000606499 OR56A3Q8NH54 315 aa7.42□□□□□ -1.22
MSH6-211ENST00000606499 FLVCR1-AS1Q8TAF5 88 aa7.42□□□□□ -1.22
MSH6-211ENST00000606499 MDM1Q8TC05 714 aa7.42□□□□□ -1.22
MSH6-211ENST00000606499 UBTD2Q8WUN7 234 aa7.42□□□□□ -1.22
MSH6-211ENST00000606499 SMPDL3AQ92484 453 aa7.42□□□□□ -1.22
MSH6-211ENST00000606499 FAM122AQ96E09 287 aa7.42□□□□□ -1.22
MSH6-211ENST00000606499 MOCOSQ96EN8 888 aa7.42□□□□□ -1.22
MSH6-211ENST00000606499 PPM1MQ96MI6 270 aa7.42□□□□□ -1.22
MSH6-211ENST00000606499 TGM7Q96PF1 710 aa7.42□□□□□ -1.22
MSH6-211ENST00000606499 OR2A14Q96R47 310 aa7.42□□□□□ -1.22
MSH6-211ENST00000606499 OR4K3Q96R72 315 aa7.42□□□□□ -1.22
MSH6-211ENST00000606499 GFM1Q96RP9 751 aaKnown RBP7.42□□□□□ -1.22
MSH6-211ENST00000606499 MIPEPQ99797 713 aa7.42□□□□□ -1.22
MSH6-211ENST00000606499 SGPP1Q9BX95 441 aa7.42□□□□□ -1.22
MSH6-211ENST00000606499 CD244Q9BZW8 370 aa7.42□□□□□ -1.22
MSH6-211ENST00000606499 LRRN3Q9H3W5 708 aa7.42□□□□□ -1.22
MSH6-211ENST00000606499 SLC32A1Q9H598 525 aa7.42□□□□□ -1.22
MSH6-211ENST00000606499 MED4Q9NPJ6 270 aa7.42□□□□□ -1.22
MSH6-211ENST00000606499 INTS7Q9NVH2 962 aaKnown RBP7.42□□□□□ -1.22
MSH6-211ENST00000606499 ACTR10Q9NZ32 417 aa7.42□□□□□ -1.22
MSH6-211ENST00000606499 COPG2Q9UBF2 871 aa7.42□□□□□ -1.22
MSH6-211ENST00000606499 KLHL3Q9UH77 587 aa7.42□□□□□ -1.22
MSH6-211ENST00000606499 TAC3Q9UHF0 121 aa7.42□□□□□ -1.22
MSH6-211ENST00000606499 POMT2Q9UKY4 750 aa7.42□□□□□ -1.22
MSH6-211ENST00000606499 FAM186AA6NE01 2351 aa7.42□□□□□ -1.22
MSH6-211ENST00000606499 MN1Q10571 1320 aaPredicted RBP7.42□□□□□ -1.22
MSH6-211ENST00000606499 FRYQ5TBA9 3013 aa7.42□□□□□ -1.22
MSH6-211ENST00000606499 RP1P56715 2156 aa7.42□□□□□ -1.22
MSH6-211ENST00000606499 SPTBN4Q9H254 2564 aa7.41□□□□□ -1.22
MSH6-211ENST00000606499 WDR91A4D1P6 747 aa7.41□□□□□ -1.22
MSH6-211ENST00000606499 D6RAR5 112 aa7.41□□□□□ -1.22
MSH6-211ENST00000606499 STX16-NPEPL1H3BU86 382 aa7.41□□□□□ -1.22
MSH6-211ENST00000606499 K7EPI3 171 aa7.41□□□□□ -1.22
MSH6-211ENST00000606499 NTN3O00634 580 aaPredicted RBP7.41□□□□□ -1.22
MSH6-211ENST00000606499 E2F3O00716 465 aa7.41□□□□□ -1.22
MSH6-211ENST00000606499 STX16O14662 325 aa7.41□□□□□ -1.22
MSH6-211ENST00000606499 CAPN5O15484 640 aaPredicted RBP7.41□□□□□ -1.22
MSH6-211ENST00000606499 NRP2O60462 931 aa7.41□□□□□ -1.22
MSH6-211ENST00000606499 STK16O75716 305 aa7.41□□□□□ -1.22
MSH6-211ENST00000606499 IPO13O94829 963 aaKnown RBP7.41□□□□□ -1.22
MSH6-211ENST00000606499 CPNE6O95741 557 aa7.41□□□□□ -1.22
MSH6-211ENST00000606499 BPGMP07738 259 aa7.41□□□□□ -1.22
MSH6-211ENST00000606499 RPS17P08708 135 aaKnown RBP7.41□□□□□ -1.22
MSH6-211ENST00000606499 PVRP15151 417 aa7.41□□□□□ -1.22
MSH6-211ENST00000606499 TSPAN8P19075 237 aa7.41□□□□□ -1.22
MSH6-211ENST00000606499 EPORP19235 508 aa7.41□□□□□ -1.22
MSH6-211ENST00000606499 NR1D1P20393 614 aa7.41□□□□□ -1.22
MSH6-211ENST00000606499 CSRP1P21291 193 aaKnown RBP7.41□□□□□ -1.22
MSH6-211ENST00000606499 OAS2P29728 719 aaKnown RBP7.41□□□□□ -1.22
MSH6-211ENST00000606499 PRDX3P30048 256 aaKnown RBP7.41□□□□□ -1.22
MSH6-211ENST00000606499 ALDH3A1P30838 453 aa7.41□□□□□ -1.22
MSH6-211ENST00000606499 HSD17B2P37059 387 aa7.41□□□□□ -1.22
MSH6-211ENST00000606499 LSSP48449 732 aa7.41□□□□□ -1.22
MSH6-211ENST00000606499 SERPINB4P48594 390 aa7.41□□□□□ -1.22
MSH6-211ENST00000606499 NOVA1P51513 510 aaKnown RBP7.41□□□□□ -1.22
MSH6-211ENST00000606499 WDR4P57081 412 aaKnown RBP7.41□□□□□ -1.22
MSH6-211ENST00000606499 HERVK_113P63132 956 aa7.41□□□□□ -1.22
MSH6-211ENST00000606499 PPP2R2AP63151 447 aa7.41□□□□□ -1.22
MSH6-211ENST00000606499 SIM1P81133 766 aaPredicted RBP7.41□□□□□ -1.22
MSH6-211ENST00000606499 PRKAA1Q13131 559 aa7.41□□□□□ -1.22
MSH6-211ENST00000606499 KIR2DS3Q14952 304 aa7.41□□□□□ -1.22
MSH6-211ENST00000606499 SF1Q15637 639 aaKnown RBP7.41□□□□□ -1.22
MSH6-211ENST00000606499 SNAP47Q5SQN1 464 aa7.41□□□□□ -1.22
MSH6-211ENST00000606499 ZNF678Q5SXM1 525 aa7.41□□□□□ -1.22
MSH6-211ENST00000606499 HHATQ5VTY9 493 aa7.41□□□□□ -1.22
MSH6-211ENST00000606499 CAPN13Q6MZZ7 669 aaPredicted RBP7.41□□□□□ -1.22
MSH6-211ENST00000606499 WDR74Q6RFH5 385 aaPredicted RBP7.41□□□□□ -1.22
MSH6-211ENST00000606499 SPESP1Q6UW49 350 aa7.41□□□□□ -1.22
MSH6-211ENST00000606499 DHRS13Q6UX07 377 aa7.41□□□□□ -1.22
MSH6-211ENST00000606499 ZNF574Q6ZN55 896 aaPredicted RBP7.41□□□□□ -1.22
MSH6-211ENST00000606499 ZCCHC23Q6ZST2 131 aa7.41□□□□□ -1.22
MSH6-211ENST00000606499 LRRC70Q7Z2Q7 622 aa7.41□□□□□ -1.22
MSH6-211ENST00000606499 B3GNT8Q7Z7M8 397 aa7.41□□□□□ -1.22
MSH6-211ENST00000606499 SLCO6A1Q86UG4 719 aa7.41□□□□□ -1.22
MSH6-211ENST00000606499 TEX9Q8N6V9 391 aa7.41□□□□□ -1.22
MSH6-211ENST00000606499 CCNYL1Q8N7R7 359 aa7.41□□□□□ -1.22
MSH6-211ENST00000606499 SNX31Q8N9S9 440 aa7.41□□□□□ -1.22
MSH6-211ENST00000606499 OR2L3Q8NG85 312 aa7.41□□□□□ -1.22
MSH6-211ENST00000606499 NSUN5Q96P11 429 aaKnown RBP7.41□□□□□ -1.22
MSH6-211ENST00000606499 PAIP2Q9BPZ3 127 aaKnown RBP7.41□□□□□ -1.22
MSH6-211ENST00000606499 ERVK-6Q9BXR3 956 aa7.41□□□□□ -1.22
MSH6-211ENST00000606499 PITPNM3Q9BZ71 974 aa7.41□□□□□ -1.22
MSH6-211ENST00000606499 KLHL25Q9H0H3 589 aa7.41□□□□□ -1.22
MSH6-211ENST00000606499 ABCG4Q9H172 646 aa7.41□□□□□ -1.22
MSH6-211ENST00000606499 SEMA6CQ9H3T2 930 aa7.41□□□□□ -1.22
MSH6-211ENST00000606499 EPB41L1Q9H4G0 881 aa7.41□□□□□ -1.22
MSH6-211ENST00000606499 CNOT10Q9H9A5 744 aaKnown RBP7.41□□□□□ -1.22
MSH6-211ENST00000606499 SLC6A20Q9NP91 592 aa7.41□□□□□ -1.22
MSH6-211ENST00000606499 DNAJC11Q9NVH1 559 aa7.41□□□□□ -1.22
MSH6-211ENST00000606499 CUEDC1Q9NWM3 386 aaPredicted RBP7.41□□□□□ -1.22
MSH6-211ENST00000606499 OXSMQ9NWU1 459 aa7.41□□□□□ -1.22
MSH6-211ENST00000606499 NKIRAS1Q9NYS0 192 aa7.41□□□□□ -1.22
MSH6-211ENST00000606499 OPTCQ9UBM4 332 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms