RNA–Protein interactions for RNA: ENST00000602783.1

PPFIA3-209, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 980 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-209ENST00000602783 CASC4Q6P4E1 433 aa20.33■□□□□ 0.85
PPFIA3-209ENST00000602783 CCDC137Q6PK04 289 aaKnown RBP20.33■□□□□ 0.85
PPFIA3-209ENST00000602783 SDCCAG8Q86SQ7 713 aaPredicted RBP20.33■□□□□ 0.85
PPFIA3-209ENST00000602783 REXO1L1PQ8IX06 675 aa20.33■□□□□ 0.85
PPFIA3-209ENST00000602783 IQCKQ8N0W5 287 aa20.33■□□□□ 0.85
PPFIA3-209ENST00000602783 DENND1AQ8TEH3 1009 aa20.33■□□□□ 0.85
PPFIA3-209ENST00000602783 SKA2Q8WVK7 121 aaPredicted RBP20.33■□□□□ 0.85
PPFIA3-209ENST00000602783 SNRNP40Q96DI7 357 aaKnown RBP20.33■□□□□ 0.85
PPFIA3-209ENST00000602783 BIRC8Q96P09 236 aa20.33■□□□□ 0.85
PPFIA3-209ENST00000602783 NAP1L3Q99457 506 aaPredicted RBP20.33■□□□□ 0.85
PPFIA3-209ENST00000602783 GRPEL1Q9HAV7 217 aa20.33■□□□□ 0.85
PPFIA3-209ENST00000602783 SAMD15Q9P1V8 674 aa20.33■□□□□ 0.85
PPFIA3-209ENST00000602783 PLEKHB1Q9UF11 243 aaPredicted RBP20.33■□□□□ 0.85
PPFIA3-209ENST00000602783 TSR3Q9UJK0 312 aaKnown RBP20.33■□□□□ 0.85
PPFIA3-209ENST00000602783 B3GNT3Q9Y2A9 372 aa20.33■□□□□ 0.85
PPFIA3-209ENST00000602783 NFS1Q9Y697 457 aa20.33■□□□□ 0.85
PPFIA3-209ENST00000602783 NIPSNAP2O75323 286 aa20.32■□□□□ 0.84
PPFIA3-209ENST00000602783 PIM1P11309 404 aaPredicted RBP20.32■□□□□ 0.84
PPFIA3-209ENST00000602783 PAMP19021 973 aa20.32■□□□□ 0.84
PPFIA3-209ENST00000602783 ITGAXP20702 1163 aa20.32■□□□□ 0.84
PPFIA3-209ENST00000602783 OGNP20774 298 aaKnown RBP20.32■□□□□ 0.84
PPFIA3-209ENST00000602783 MCM3P25205 808 aa20.32■□□□□ 0.84
PPFIA3-209ENST00000602783 OVCH1Q7RTY7 1134 aa20.32■□□□□ 0.84
PPFIA3-209ENST00000602783 CISD2Q8N5K1 135 aaKnown RBP20.32■□□□□ 0.84
PPFIA3-209ENST00000602783 PRR7Q8TB68 274 aa20.32■□□□□ 0.84
PPFIA3-209ENST00000602783 COG1Q8WTW3 980 aa20.32■□□□□ 0.84
PPFIA3-209ENST00000602783 RAD51AP1Q96B01 352 aa20.32■□□□□ 0.84
PPFIA3-209ENST00000602783 ZNF669Q96BR6 464 aaPredicted RBP20.32■□□□□ 0.84
PPFIA3-209ENST00000602783 FAM136AQ96C01 138 aa20.32■□□□□ 0.84
PPFIA3-209ENST00000602783 CUTCQ9NTM9 273 aa20.32■□□□□ 0.84
PPFIA3-209ENST00000602783 IL1RAPL1Q9NZN1 696 aa20.32■□□□□ 0.84
PPFIA3-209ENST00000602783 KRT87PA6NCN2 255 aa20.31■□□□□ 0.84
PPFIA3-209ENST00000602783 GOLGA8MH3BSY2 632 aa20.31■□□□□ 0.84
PPFIA3-209ENST00000602783 AGPSO00116 658 aa20.31■□□□□ 0.84
PPFIA3-209ENST00000602783 DSCR3O14972 297 aa20.31■□□□□ 0.84
PPFIA3-209ENST00000602783 PFDN6O15212 129 aa20.31■□□□□ 0.84
PPFIA3-209ENST00000602783 PRICKLE3O43900 615 aaPredicted RBP20.31■□□□□ 0.84
PPFIA3-209ENST00000602783 PHF2O75151 1096 aa20.31■□□□□ 0.84
PPFIA3-209ENST00000602783 IPO13O94829 963 aaKnown RBP20.31■□□□□ 0.84
PPFIA3-209ENST00000602783 SOX8P57073 446 aa20.31■□□□□ 0.84
PPFIA3-209ENST00000602783 GRM7Q14831 915 aa20.31■□□□□ 0.84
PPFIA3-209ENST00000602783 TCTE1Q5JU00 501 aa20.31■□□□□ 0.84
PPFIA3-209ENST00000602783 ARMC3Q5W041 872 aa20.31■□□□□ 0.84
PPFIA3-209ENST00000602783 CNSTQ6PJW8 725 aa20.31■□□□□ 0.84
PPFIA3-209ENST00000602783 IGFL3Q6UXB1 125 aa20.31■□□□□ 0.84
PPFIA3-209ENST00000602783 ZADH2Q8N4Q0 377 aa20.31■□□□□ 0.84
PPFIA3-209ENST00000602783 ZDHHC19Q8WVZ1 309 aaPredicted RBP20.31■□□□□ 0.84
PPFIA3-209ENST00000602783 ZUFSPQ96AP4 578 aa20.31■□□□□ 0.84
PPFIA3-209ENST00000602783 FKBP10Q96AY3 582 aa20.31■□□□□ 0.84
PPFIA3-209ENST00000602783 SERPINB12Q96P63 405 aa20.31■□□□□ 0.84
PPFIA3-209ENST00000602783 OSBPL9Q96SU4 736 aa20.31■□□□□ 0.84
PPFIA3-209ENST00000602783 TCF12Q99081 682 aa20.31■□□□□ 0.84
PPFIA3-209ENST00000602783 RAB11FIP5Q9BXF6 653 aa20.31■□□□□ 0.84
PPFIA3-209ENST00000602783 ILKAPQ9H0C8 392 aaPredicted RBP20.31■□□□□ 0.84
PPFIA3-209ENST00000602783 XAB2Q9HCS7 855 aaKnown RBP20.31■□□□□ 0.84
PPFIA3-209ENST00000602783 ASF1BQ9NVP2 202 aa20.31■□□□□ 0.84
PPFIA3-209ENST00000602783 CUEDC1Q9NWM3 386 aaPredicted RBP20.31■□□□□ 0.84
PPFIA3-209ENST00000602783 CRYL1Q9Y2S2 319 aa20.31■□□□□ 0.84
PPFIA3-209ENST00000602783 NEU2Q9Y3R4 380 aa20.31■□□□□ 0.84
PPFIA3-209ENST00000602783 HIVEP3Q5T1R4 2406 aa20.31■□□□□ 0.84
PPFIA3-209ENST00000602783 C1orf105O95561 183 aa20.3■□□□□ 0.84
PPFIA3-209ENST00000602783 ONECUT2O95948 504 aa20.3■□□□□ 0.84
PPFIA3-209ENST00000602783 ALBP02768 609 aa20.3■□□□□ 0.84
PPFIA3-209ENST00000602783 ESR1P03372 595 aa20.3■□□□□ 0.84
PPFIA3-209ENST00000602783 MLNP12872 115 aa20.3■□□□□ 0.84
PPFIA3-209ENST00000602783 MMP11P24347 488 aa20.3■□□□□ 0.84
PPFIA3-209ENST00000602783 ITGA3P26006 1051 aa20.3■□□□□ 0.84
PPFIA3-209ENST00000602783 NKG7Q16617 165 aa20.3■□□□□ 0.84
PPFIA3-209ENST00000602783 CCSMST1Q4G0I0 132 aa20.3■□□□□ 0.84
PPFIA3-209ENST00000602783 TTC29Q8NA56 475 aaPredicted RBP20.3■□□□□ 0.84
PPFIA3-209ENST00000602783 MCUQ8NE86 351 aa20.3■□□□□ 0.84
PPFIA3-209ENST00000602783 TM9SF4Q92544 642 aa20.3■□□□□ 0.84
PPFIA3-209ENST00000602783 NACC2Q96BF6 587 aa20.3■□□□□ 0.84
PPFIA3-209ENST00000602783 SELENOSQ9BQE4 189 aa20.3■□□□□ 0.84
PPFIA3-209ENST00000602783 KCNF1Q9H3M0 494 aa20.3■□□□□ 0.84
PPFIA3-209ENST00000602783 ZBTB20Q9HC78 741 aaPredicted RBP20.3■□□□□ 0.84
PPFIA3-209ENST00000602783 CDC23Q9UJX2 597 aa20.3■□□□□ 0.84
PPFIA3-209ENST00000602783 FBXL4Q9UKA2 621 aa20.3■□□□□ 0.84
PPFIA3-209ENST00000602783 MDC1Q14676 2089 aaKnown RBP20.3■□□□□ 0.84
PPFIA3-209ENST00000602783 NUP210LQ5VU65 1888 aa20.29■□□□□ 0.84
PPFIA3-209ENST00000602783 FAM237BA0A1B0GVD1 139 aa20.29■□□□□ 0.84
PPFIA3-209ENST00000602783 TARM1B6A8C7 271 aa20.29■□□□□ 0.84
PPFIA3-209ENST00000602783 H3BMM5 538 aa20.29■□□□□ 0.84
PPFIA3-209ENST00000602783 ZSCAN12O43309 604 aa20.29■□□□□ 0.84
PPFIA3-209ENST00000602783 CTSVO60911 334 aa20.29■□□□□ 0.84
PPFIA3-209ENST00000602783 FKBP9O95302 570 aa20.29■□□□□ 0.84
PPFIA3-209ENST00000602783 F7P08709 466 aaPredicted RBP20.29■□□□□ 0.84
PPFIA3-209ENST00000602783 RNF224P0DH78 156 aa20.29■□□□□ 0.84
PPFIA3-209ENST00000602783 PSMB5P28074 263 aa20.29■□□□□ 0.84
PPFIA3-209ENST00000602783 OR1D4P47884 311 aa20.29■□□□□ 0.84
PPFIA3-209ENST00000602783 ADARP55265 1226 aaKnown RBP20.29■□□□□ 0.84
PPFIA3-209ENST00000602783 VSX2P58304 361 aaPredicted RBP20.29■□□□□ 0.84
PPFIA3-209ENST00000602783 AIMP2Q13155 320 aaKnown RBP20.29■□□□□ 0.84
PPFIA3-209ENST00000602783 DHX34Q14147 1143 aaKnown RBP20.29■□□□□ 0.84
PPFIA3-209ENST00000602783 GBX1Q14549 363 aa20.29■□□□□ 0.84
PPFIA3-209ENST00000602783 NR6A1Q15406 480 aa20.29■□□□□ 0.84
PPFIA3-209ENST00000602783 FAM214AQ32MH5 1076 aa20.29■□□□□ 0.84
PPFIA3-209ENST00000602783 ANKRD20A4Q4UJ75 823 aa20.29■□□□□ 0.84
PPFIA3-209ENST00000602783 YOD1Q5VVQ6 348 aaPredicted RBP20.29■□□□□ 0.84
PPFIA3-209ENST00000602783 ZNF470Q6ECI4 717 aa20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms