RNA–Protein interactions for RNA: ENST00000601912.5

VRK3-225, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,668 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-225ENST00000601912 LAYNQ6UX15 382 aa17.42■□□□□ 0.38
VRK3-225ENST00000601912 OR52E1Q8NGJ3 308 aa17.42■□□□□ 0.38
VRK3-225ENST00000601912 PRR11Q96HE9 360 aaPredicted RBP17.42■□□□□ 0.38
VRK3-225ENST00000601912 MENTQ9BUN1 341 aa17.42■□□□□ 0.38
VRK3-225ENST00000601912 ELOVL6Q9H5J4 265 aa17.42■□□□□ 0.38
VRK3-225ENST00000601912 EML5Q05BV3 1969 aa17.42■□□□□ 0.38
VRK3-225ENST00000601912 CEP192Q8TEP8 1941 aa17.41■□□□□ 0.38
VRK3-225ENST00000601912 SLC28A1O00337 649 aa17.41■□□□□ 0.38
VRK3-225ENST00000601912 MANBAO00462 879 aa17.41■□□□□ 0.38
VRK3-225ENST00000601912 VILLO15195 856 aa17.41■□□□□ 0.38
VRK3-225ENST00000601912 NME1P15531 152 aaKnown RBP17.41■□□□□ 0.38
VRK3-225ENST00000601912 LBPP18428 481 aa17.41■□□□□ 0.38
VRK3-225ENST00000601912 DOC2AQ14183 400 aa17.41■□□□□ 0.38
VRK3-225ENST00000601912 ABRAXAS2Q15018 415 aa17.41■□□□□ 0.38
VRK3-225ENST00000601912 XKR7Q5GH72 579 aa17.41■□□□□ 0.38
VRK3-225ENST00000601912 IYDQ6PHW0 289 aa17.41■□□□□ 0.38
VRK3-225ENST00000601912 SCIMPQ6UWF3 145 aa17.41■□□□□ 0.38
VRK3-225ENST00000601912 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.41■□□□□ 0.38
VRK3-225ENST00000601912 TRIM48Q8IWZ4 208 aa17.41■□□□□ 0.38
VRK3-225ENST00000601912 C2orf73Q8N5S3 287 aaPredicted RBP17.41■□□□□ 0.38
VRK3-225ENST00000601912 HMGCLL1Q8TB92 370 aa17.41■□□□□ 0.38
VRK3-225ENST00000601912 NEIL2Q969S2 332 aa17.41■□□□□ 0.38
VRK3-225ENST00000601912 CCDC106Q9BWC9 280 aa17.41■□□□□ 0.38
VRK3-225ENST00000601912 TXLNGQ9NUQ3 528 aa17.41■□□□□ 0.38
VRK3-225ENST00000601912 ZNF624Q9P2J8 865 aaPredicted RBP17.41■□□□□ 0.38
VRK3-225ENST00000601912 ZNF490Q9ULM2 529 aaPredicted RBP17.41■□□□□ 0.38
VRK3-225ENST00000601912 G3BP2Q9UN86 482 aaKnown RBP17.41■□□□□ 0.38
VRK3-225ENST00000601912 NCOR1O75376 2440 aa17.4■□□□□ 0.38
VRK3-225ENST00000601912 KCNE1BA0A087WTH5 132 aa17.4■□□□□ 0.38
VRK3-225ENST00000601912 CAPN14A8MX76 684 aa17.4■□□□□ 0.38
VRK3-225ENST00000601912 RGS14O43566 566 aa17.4■□□□□ 0.38
VRK3-225ENST00000601912 ADSLP30566 484 aaPredicted RBP17.4■□□□□ 0.38
VRK3-225ENST00000601912 CASP2P42575 452 aa17.4■□□□□ 0.38
VRK3-225ENST00000601912 HTR6P50406 440 aa17.4■□□□□ 0.38
VRK3-225ENST00000601912 NXPH1P58417 271 aa17.4■□□□□ 0.38
VRK3-225ENST00000601912 ELOCQ15369 112 aa17.4■□□□□ 0.38
VRK3-225ENST00000601912 TEAD4Q15561 434 aa17.4■□□□□ 0.38
VRK3-225ENST00000601912 ZRSR2Q15696 482 aaKnown RBP17.4■□□□□ 0.38
VRK3-225ENST00000601912 LYSMD4Q5XG99 296 aa17.4■□□□□ 0.38
VRK3-225ENST00000601912 TMEM198Q66K66 360 aa17.4■□□□□ 0.38
VRK3-225ENST00000601912 GRHL2Q6ISB3 625 aa17.4■□□□□ 0.38
VRK3-225ENST00000601912 SLCO4C1Q6ZQN7 724 aa17.4■□□□□ 0.38
VRK3-225ENST00000601912 CHSY3Q70JA7 882 aa17.4■□□□□ 0.38
VRK3-225ENST00000601912 TMPRSS11BQ86T26 416 aa17.4■□□□□ 0.38
VRK3-225ENST00000601912 CPSF7Q8N684 471 aaKnown RBP17.4■□□□□ 0.38
VRK3-225ENST00000601912 LMNTD1Q8N9Z9 388 aa17.4■□□□□ 0.38
VRK3-225ENST00000601912 OR2L8Q8NGY9 312 aa17.4■□□□□ 0.38
VRK3-225ENST00000601912 GAB3Q8WWW8 586 aa17.4■□□□□ 0.38
VRK3-225ENST00000601912 SLC5A11Q8WWX8 675 aa17.4■□□□□ 0.38
VRK3-225ENST00000601912 SELENOMQ8WWX9 145 aa17.4■□□□□ 0.38
VRK3-225ENST00000601912 USP7Q93009 1102 aa17.4■□□□□ 0.38
VRK3-225ENST00000601912 PTCD3Q96EY7 689 aaKnown RBP17.4■□□□□ 0.38
VRK3-225ENST00000601912 CATSPER2Q96P56 530 aa17.4■□□□□ 0.38
VRK3-225ENST00000601912 EHD1Q9H4M9 534 aa17.4■□□□□ 0.38
VRK3-225ENST00000601912 CAPN7Q9Y6W3 813 aa17.4■□□□□ 0.38
VRK3-225ENST00000601912 KIR2DS5A0A0G2JLQ3 304 aa17.39■□□□□ 0.37
VRK3-225ENST00000601912 A0A0G2JNG1 304 aa17.39■□□□□ 0.37
VRK3-225ENST00000601912 PRR5-ARHGAP8B1AHC4 643 aa17.39■□□□□ 0.37
VRK3-225ENST00000601912 KIR2DS3K7RE56 304 aa17.39■□□□□ 0.37
VRK3-225ENST00000601912 SLC22A2O15244 555 aa17.39■□□□□ 0.37
VRK3-225ENST00000601912 PRAMEF4O60810 478 aa17.39■□□□□ 0.37
VRK3-225ENST00000601912 PKLRP30613 574 aa17.39■□□□□ 0.37
VRK3-225ENST00000601912 SHMT2P34897 504 aa17.39■□□□□ 0.37
VRK3-225ENST00000601912 SLC19A1P41440 591 aa17.39■□□□□ 0.37
VRK3-225ENST00000601912 DHPSP49366 369 aaPredicted RBP17.39■□□□□ 0.37
VRK3-225ENST00000601912 CSNK1EP49674 416 aaKnown RBP17.39■□□□□ 0.37
VRK3-225ENST00000601912 ZNF33BQ06732 778 aa17.39■□□□□ 0.37
VRK3-225ENST00000601912 C1orf61Q13536 156 aa17.39■□□□□ 0.37
VRK3-225ENST00000601912 KIR2DS5Q14953 304 aa17.39■□□□□ 0.37
VRK3-225ENST00000601912 ATP6AP1LQ52LC2 224 aa17.39■□□□□ 0.37
VRK3-225ENST00000601912 SGO1Q5FBB7 561 aa17.39■□□□□ 0.37
VRK3-225ENST00000601912 PAGE2BQ5JRK9 111 aa17.39■□□□□ 0.37
VRK3-225ENST00000601912 PRAMEF9Q5VWM5 478 aa17.39■□□□□ 0.37
VRK3-225ENST00000601912 FRG2Q64ET8 278 aa17.39■□□□□ 0.37
VRK3-225ENST00000601912 ATG9BQ674R7 924 aa17.39■□□□□ 0.37
VRK3-225ENST00000601912 TRIM46Q7Z4K8 759 aa17.39■□□□□ 0.37
VRK3-225ENST00000601912 DTWD2Q8NBA8 298 aa17.39■□□□□ 0.37
VRK3-225ENST00000601912 ZFPM2Q8WW38 1151 aa17.39■□□□□ 0.37
VRK3-225ENST00000601912 NSL1Q96IY1 281 aa17.39■□□□□ 0.37
VRK3-225ENST00000601912 FRG2BQ96QU4 278 aa17.39■□□□□ 0.37
VRK3-225ENST00000601912 EFCAB11Q9BUY7 163 aa17.39■□□□□ 0.37
VRK3-225ENST00000601912 LRRC61Q9BV99 259 aa17.39■□□□□ 0.37
VRK3-225ENST00000601912 SPASTQ9UBP0 616 aa17.39■□□□□ 0.37
VRK3-225ENST00000601912 SLC12A4Q9UP95 1085 aa17.39■□□□□ 0.37
VRK3-225ENST00000601912 PCDHGA11Q9Y5H2 935 aa17.39■□□□□ 0.37
VRK3-225ENST00000601912 TRBV23OR9-2A0A075B6M9 112 aa17.39■□□□□ 0.37
VRK3-225ENST00000601912 H0YIV9 168 aa17.39■□□□□ 0.37
VRK3-225ENST00000601912 PEX11AO75192 247 aa17.39■□□□□ 0.37
VRK3-225ENST00000601912 VIPP01282 170 aa17.39■□□□□ 0.37
VRK3-225ENST00000601912 C1GALT1C1LP0DN25 315 aa17.39■□□□□ 0.37
VRK3-225ENST00000601912 GNSP15586 552 aa17.39■□□□□ 0.37
VRK3-225ENST00000601912 XRCC1P18887 633 aaPredicted RBP17.39■□□□□ 0.37
VRK3-225ENST00000601912 HNRNPKP61978 463 aaKnown RBP eCLIP17.39■□□□□ 0.37
VRK3-225ENST00000601912 LAPTM5Q13571 262 aa17.39■□□□□ 0.37
VRK3-225ENST00000601912 HIST2H2ACQ16777 129 aaPredicted RBP17.39■□□□□ 0.37
VRK3-225ENST00000601912 IMPG1Q17R60 797 aa17.39■□□□□ 0.37
VRK3-225ENST00000601912 HIST2H2AA3Q6FI13 130 aa17.39■□□□□ 0.37
VRK3-225ENST00000601912 OGFOD2Q6N063 350 aa17.39■□□□□ 0.37
VRK3-225ENST00000601912 NXPE4Q6UWF7 544 aa17.39■□□□□ 0.37
VRK3-225ENST00000601912 SPATA19Q7Z5L4 167 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms