RNA–Protein interactions for RNA: ENST00000593829.5

LSM4-203, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM4, Length 1,908 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-203ENST00000593829 PRKAA1Q13131 559 aa19■□□□□ 0.63
LSM4-203ENST00000593829 C16orf72Q14CZ0 275 aa19■□□□□ 0.63
LSM4-203ENST00000593829 FAM45BPQ6NSW5 357 aa19■□□□□ 0.63
LSM4-203ENST00000593829 ADGRD1Q6QNK2 874 aa19■□□□□ 0.63
LSM4-203ENST00000593829 UNQ6494/PRO21346Q6UXR6 183 aa19■□□□□ 0.63
LSM4-203ENST00000593829 ARHGAP22Q7Z5H3 698 aa19■□□□□ 0.63
LSM4-203ENST00000593829 C4orf33Q8N1A6 199 aa19■□□□□ 0.63
LSM4-203ENST00000593829 FAM45AQ8TCE6 357 aa19■□□□□ 0.63
LSM4-203ENST00000593829 SH3GL3Q99963 347 aa19■□□□□ 0.63
LSM4-203ENST00000593829 RUVBL2Q9Y230 463 aaKnown RBP19■□□□□ 0.63
LSM4-203ENST00000593829 LOXL2Q9Y4K0 774 aa19■□□□□ 0.63
LSM4-203ENST00000593829 A0A1W2PNU3 283 aaPredicted RBP19■□□□□ 0.63
LSM4-203ENST00000593829 A8MU76 341 aa19■□□□□ 0.63
LSM4-203ENST00000593829 PLD2O14939 933 aa19■□□□□ 0.63
LSM4-203ENST00000593829 TOX3O15405 576 aaPredicted RBP19■□□□□ 0.63
LSM4-203ENST00000593829 CBX6O95503 412 aa19■□□□□ 0.63
LSM4-203ENST00000593829 C1QAP02745 245 aa19■□□□□ 0.63
LSM4-203ENST00000593829 CSTF2P33240 577 aaKnown RBP eCLIP19■□□□□ 0.63
LSM4-203ENST00000593829 SHMT2P34897 504 aa19■□□□□ 0.63
LSM4-203ENST00000593829 VHLP40337 213 aa19■□□□□ 0.63
LSM4-203ENST00000593829 CCNFP41002 786 aa19■□□□□ 0.63
LSM4-203ENST00000593829 KRT72Q14CN4 511 aa19■□□□□ 0.63
LSM4-203ENST00000593829 KBTBD12Q3ZCT8 623 aa19■□□□□ 0.63
LSM4-203ENST00000593829 CTAGE3PQ8IX95 158 aa19■□□□□ 0.63
LSM4-203ENST00000593829 AGBL5Q8NDL9 886 aa19■□□□□ 0.63
LSM4-203ENST00000593829 MZB1Q8WU39 189 aa19■□□□□ 0.63
LSM4-203ENST00000593829 PTCD3Q96EY7 689 aaKnown RBP19■□□□□ 0.63
LSM4-203ENST00000593829 CPNE1Q99829 537 aa19■□□□□ 0.63
LSM4-203ENST00000593829 RHOJQ9H4E5 214 aa19■□□□□ 0.63
LSM4-203ENST00000593829 XKR8Q9H6D3 395 aa19■□□□□ 0.63
LSM4-203ENST00000593829 ICKQ9UPZ9 632 aa19■□□□□ 0.63
LSM4-203ENST00000593829 PCDHGA8Q9Y5G5 932 aa19■□□□□ 0.63
LSM4-203ENST00000593829 C1QTNF9BB2RNN3 333 aa18.99■□□□□ 0.63
LSM4-203ENST00000593829 AGRPO00253 132 aa18.99■□□□□ 0.63
LSM4-203ENST00000593829 EIF3FO00303 357 aaPredicted RBP18.99■□□□□ 0.63
LSM4-203ENST00000593829 C1orf105O95561 183 aa18.99■□□□□ 0.63
LSM4-203ENST00000593829 C1QTNF9P0C862 333 aa18.99■□□□□ 0.63
LSM4-203ENST00000593829 POLR2CP19387 275 aaPredicted RBP18.99■□□□□ 0.63
LSM4-203ENST00000593829 FDXRP22570 491 aa18.99■□□□□ 0.63
LSM4-203ENST00000593829 FAM92BQ6ZTR7 304 aa18.99■□□□□ 0.63
LSM4-203ENST00000593829 CPNE9Q8IYJ1 553 aa18.99■□□□□ 0.63
LSM4-203ENST00000593829 LSMEM2Q8N112 164 aa18.99■□□□□ 0.63
LSM4-203ENST00000593829 ELMO2Q96JJ3 720 aa18.99■□□□□ 0.63
LSM4-203ENST00000593829 NRTNQ99748 197 aa18.99■□□□□ 0.63
LSM4-203ENST00000593829 BTBD10Q9BSF8 475 aa18.99■□□□□ 0.63
LSM4-203ENST00000593829 MCMBPQ9BTE3 642 aa18.99■□□□□ 0.63
LSM4-203ENST00000593829 A0A1W2PPM1 405 aa18.98■□□□□ 0.63
LSM4-203ENST00000593829 DPPA5A6NC42 116 aa18.98■□□□□ 0.63
LSM4-203ENST00000593829 MATN2O00339 956 aa18.98■□□□□ 0.63
LSM4-203ENST00000593829 ANKRD34CP0C6C1 535 aa18.98■□□□□ 0.63
LSM4-203ENST00000593829 JMJD7P0C870 316 aa18.98■□□□□ 0.63
LSM4-203ENST00000593829 MPC1LP0DKB6 136 aa18.98■□□□□ 0.63
LSM4-203ENST00000593829 PPP1CAP62136 330 aa18.98■□□□□ 0.63
LSM4-203ENST00000593829 CYP4F3Q08477 520 aa18.98■□□□□ 0.63
LSM4-203ENST00000593829 PDAP1Q13442 181 aaKnown RBP18.98■□□□□ 0.63
LSM4-203ENST00000593829 LRRC8EQ6NSJ5 796 aa18.98■□□□□ 0.63
LSM4-203ENST00000593829 RAD51AP1Q96B01 352 aa18.98■□□□□ 0.63
LSM4-203ENST00000593829 VPS39Q96JC1 886 aa18.98■□□□□ 0.63
LSM4-203ENST00000593829 CD180Q99467 661 aa18.98■□□□□ 0.63
LSM4-203ENST00000593829 MIPEPQ99797 713 aa18.98■□□□□ 0.63
LSM4-203ENST00000593829 ACSS3Q9H6R3 686 aa18.98■□□□□ 0.63
LSM4-203ENST00000593829 OR6C2Q9NZP2 312 aa18.98■□□□□ 0.63
LSM4-203ENST00000593829 PLAGL1Q9UM63 463 aa18.98■□□□□ 0.63
LSM4-203ENST00000593829 LRCH1Q9Y2L9 728 aa18.98■□□□□ 0.63
LSM4-203ENST00000593829 MTO1Q9Y2Z2 717 aaKnown RBP18.98■□□□□ 0.63
LSM4-203ENST00000593829 FAM95CA0A1B0GW59 222 aa18.98■□□□□ 0.63
LSM4-203ENST00000593829 BTN3A3O00478 584 aa18.98■□□□□ 0.63
LSM4-203ENST00000593829 NVLO15381 856 aaKnown RBP18.98■□□□□ 0.63
LSM4-203ENST00000593829 HGFP14210 728 aa18.98■□□□□ 0.63
LSM4-203ENST00000593829 KRT4P19013 534 aa18.98■□□□□ 0.63
LSM4-203ENST00000593829 GP5P40197 560 aa18.98■□□□□ 0.63
LSM4-203ENST00000593829 RGS4P49798 205 aa18.98■□□□□ 0.63
LSM4-203ENST00000593829 NAB1Q13506 487 aa18.98■□□□□ 0.63
LSM4-203ENST00000593829 CACHD1Q5VU97 1274 aa18.98■□□□□ 0.63
LSM4-203ENST00000593829 PAQR3Q6TCH7 311 aa18.98■□□□□ 0.63
LSM4-203ENST00000593829 PRSS42Q7Z5A4 293 aa18.98■□□□□ 0.63
LSM4-203ENST00000593829 MTDHQ86UE4 582 aaKnown RBP18.98■□□□□ 0.63
LSM4-203ENST00000593829 ADGRF3Q8IZF5 1079 aa18.98■□□□□ 0.63
LSM4-203ENST00000593829 PPM1NQ8N819 430 aa18.98■□□□□ 0.63
LSM4-203ENST00000593829 BANPQ8N9N5 519 aa18.98■□□□□ 0.63
LSM4-203ENST00000593829 OLFM1Q99784 485 aa18.98■□□□□ 0.63
LSM4-203ENST00000593829 CADM1Q9BY67 442 aaKnown RBP18.98■□□□□ 0.63
LSM4-203ENST00000593829 CCDC86Q9H6F5 360 aaKnown RBP18.98■□□□□ 0.63
LSM4-203ENST00000593829 GSAPA4D1B5 854 aa18.97■□□□□ 0.63
LSM4-203ENST00000593829 PMS2P1A4D2B8 440 aa18.97■□□□□ 0.63
LSM4-203ENST00000593829 BTN3A1O00481 513 aa18.97■□□□□ 0.63
LSM4-203ENST00000593829 BRINP1O60477 761 aa18.97■□□□□ 0.63
LSM4-203ENST00000593829 PSIP1O75475 530 aaKnown RBP18.97■□□□□ 0.63
LSM4-203ENST00000593829 NEFHP12036 1026 aa18.97■□□□□ 0.63
LSM4-203ENST00000593829 SAT1P21673 171 aa18.97■□□□□ 0.63
LSM4-203ENST00000593829 RBMS1P29558 406 aaKnown RBP18.97■□□□□ 0.63
LSM4-203ENST00000593829 BDKRB1P46663 353 aa18.97■□□□□ 0.63
LSM4-203ENST00000593829 RAB28P51157 221 aa18.97■□□□□ 0.63
LSM4-203ENST00000593829 GRB7Q14451 532 aa18.97■□□□□ 0.63
LSM4-203ENST00000593829 ZRSR2Q15696 482 aaKnown RBP18.97■□□□□ 0.63
LSM4-203ENST00000593829 IGF2-ASQ6U949 168 aa18.97■□□□□ 0.63
LSM4-203ENST00000593829 CYHR1Q6ZMK1 362 aa18.97■□□□□ 0.63
LSM4-203ENST00000593829 SPNS2Q8IVW8 549 aa18.97■□□□□ 0.63
LSM4-203ENST00000593829 EEF1AKMT1Q8WVE0 214 aa18.97■□□□□ 0.63
LSM4-203ENST00000593829 PRR11Q96HE9 360 aaPredicted RBP18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms