RNA–Protein interactions for RNA: ENST00000593168.5

VMP1-217, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-217ENST00000593168 DIAPH2O60879 1101 aa13.05□□□□□ -0.32
VMP1-217ENST00000593168 CRCPO75575 148 aa13.05□□□□□ -0.32
VMP1-217ENST00000593168 WNT1P04628 370 aa13.05□□□□□ -0.32
VMP1-217ENST00000593168 ENO1P06733 434 aaKnown RBP13.05□□□□□ -0.32
VMP1-217ENST00000593168 EBLN1P0CF75 366 aa13.05□□□□□ -0.32
VMP1-217ENST00000593168 UROSP10746 265 aa13.05□□□□□ -0.32
VMP1-217ENST00000593168 CD59P13987 128 aa13.05□□□□□ -0.32
VMP1-217ENST00000593168 MAOBP27338 520 aa13.05□□□□□ -0.32
VMP1-217ENST00000593168 PRDX3P30048 256 aaKnown RBP13.05□□□□□ -0.32
VMP1-217ENST00000593168 HOXD12P35452 270 aa13.05□□□□□ -0.32
VMP1-217ENST00000593168 HALP42357 657 aa13.05□□□□□ -0.32
VMP1-217ENST00000593168 DPP6P42658 865 aa13.05□□□□□ -0.32
VMP1-217ENST00000593168 CCNG1P51959 295 aa13.05□□□□□ -0.32
VMP1-217ENST00000593168 ATXN3P54252 364 aaPredicted RBP13.05□□□□□ -0.32
VMP1-217ENST00000593168 ERVPABLB-1P60509 514 aa13.05□□□□□ -0.32
VMP1-217ENST00000593168 PCDH1Q08174 1060 aa13.05□□□□□ -0.32
VMP1-217ENST00000593168 ILF3Q12906 894 aaKnown RBP eCLIP13.05□□□□□ -0.32
VMP1-217ENST00000593168 TRAF3Q13114 568 aa13.05□□□□□ -0.32
VMP1-217ENST00000593168 NAE1Q13564 534 aa13.05□□□□□ -0.32
VMP1-217ENST00000593168 CLCA4Q14CN2 919 aa13.05□□□□□ -0.32
VMP1-217ENST00000593168 RPE65Q16518 533 aa13.05□□□□□ -0.32
VMP1-217ENST00000593168 DUOXA1Q1HG43 343 aa13.05□□□□□ -0.32
VMP1-217ENST00000593168 VWA5B1Q5TIE3 1220 aa13.05□□□□□ -0.32
VMP1-217ENST00000593168 METTL21CQ5VZV1 264 aa13.05□□□□□ -0.32
VMP1-217ENST00000593168 C19orf48Q6RUI8 117 aa13.05□□□□□ -0.32
VMP1-217ENST00000593168 TRPM8Q7Z2W7 1104 aa13.05□□□□□ -0.32
VMP1-217ENST00000593168 MILR1Q7Z6M3 343 aa13.05□□□□□ -0.32
VMP1-217ENST00000593168 PARGQ86W56 976 aa13.05□□□□□ -0.32
VMP1-217ENST00000593168 LRRC56Q8IYG6 542 aaPredicted RBP13.05□□□□□ -0.32
VMP1-217ENST00000593168 MINDY1Q8N5J2 469 aa13.05□□□□□ -0.32
VMP1-217ENST00000593168 OR52B6Q8NGF0 335 aa13.05□□□□□ -0.32
VMP1-217ENST00000593168 OR5AR1Q8NGP9 310 aa13.05□□□□□ -0.32
VMP1-217ENST00000593168 CEP76Q8TAP6 659 aa13.05□□□□□ -0.32
VMP1-217ENST00000593168 MAPK15Q8TD08 544 aa13.05□□□□□ -0.32
VMP1-217ENST00000593168 GPBAR1Q8TDU6 330 aa13.05□□□□□ -0.32
VMP1-217ENST00000593168 MAGEB10Q96LZ2 347 aaPredicted RBP13.05□□□□□ -0.32
VMP1-217ENST00000593168 C12orf66Q96MD2 445 aa13.05□□□□□ -0.32
VMP1-217ENST00000593168 FERD3LQ96RJ6 166 aa13.05□□□□□ -0.32
VMP1-217ENST00000593168 CCT7Q99832 543 aa13.05□□□□□ -0.32
VMP1-217ENST00000593168 CCDC28BQ9BUN5 200 aa13.05□□□□□ -0.32
VMP1-217ENST00000593168 GSDMCQ9BYG8 508 aa13.05□□□□□ -0.32
VMP1-217ENST00000593168 NUF2Q9BZD4 464 aa13.05□□□□□ -0.32
VMP1-217ENST00000593168 TM9SF3Q9HD45 589 aa13.05□□□□□ -0.32
VMP1-217ENST00000593168 PFDN4Q9NQP4 134 aa13.05□□□□□ -0.32
VMP1-217ENST00000593168 PRDM8Q9NQV8 689 aa13.05□□□□□ -0.32
VMP1-217ENST00000593168 SPATA7Q9P0W8 599 aa13.05□□□□□ -0.32
VMP1-217ENST00000593168 POLG2Q9UHN1 485 aa13.05□□□□□ -0.32
VMP1-217ENST00000593168 LNPEPQ9UIQ6 1025 aa13.05□□□□□ -0.32
VMP1-217ENST00000593168 SLC22A14Q9Y267 594 aa13.05□□□□□ -0.32
VMP1-217ENST00000593168 HEBP2Q9Y5Z4 205 aa13.05□□□□□ -0.32
VMP1-217ENST00000593168 SLCO1B1Q9Y6L6 691 aa13.05□□□□□ -0.32
VMP1-217ENST00000593168 LRP4O75096 1905 aa13.04□□□□□ -0.32
VMP1-217ENST00000593168 A0A1B0GTL3 188 aa13.04□□□□□ -0.32
VMP1-217ENST00000593168 KRT87PA6NCN2 255 aa13.04□□□□□ -0.32
VMP1-217ENST00000593168 ZNF839A8K0R7 811 aa13.04□□□□□ -0.32
VMP1-217ENST00000593168 UGDHO60701 494 aa13.04□□□□□ -0.32
VMP1-217ENST00000593168 CCDC22O60826 627 aa13.04□□□□□ -0.32
VMP1-217ENST00000593168 OR4F21O95013 312 aa13.04□□□□□ -0.32
VMP1-217ENST00000593168 ERGP11308 486 aa13.04□□□□□ -0.32
VMP1-217ENST00000593168 EPORP19235 508 aa13.04□□□□□ -0.32
VMP1-217ENST00000593168 AK4P27144 223 aaPredicted RBP13.04□□□□□ -0.32
VMP1-217ENST00000593168 ACTR1BP42025 376 aa13.04□□□□□ -0.32
VMP1-217ENST00000593168 PNLIPRP1P54315 467 aa13.04□□□□□ -0.32
VMP1-217ENST00000593168 FOXA1P55317 472 aa13.04□□□□□ -0.32
VMP1-217ENST00000593168 ACTR1AP61163 376 aa13.04□□□□□ -0.32
VMP1-217ENST00000593168 BTKQ06187 659 aa13.04□□□□□ -0.32
VMP1-217ENST00000593168 IFT88Q13099 833 aa13.04□□□□□ -0.32
VMP1-217ENST00000593168 TUBB3Q13509 450 aa13.04□□□□□ -0.32
VMP1-217ENST00000593168 SLC9B1Q4ZJI4 515 aa13.04□□□□□ -0.32
VMP1-217ENST00000593168 CLEC6AQ6EIG7 209 aa13.04□□□□□ -0.32
VMP1-217ENST00000593168 CAPN13Q6MZZ7 669 aaPredicted RBP13.04□□□□□ -0.32
VMP1-217ENST00000593168 ACAD11Q709F0 780 aa13.04□□□□□ -0.32
VMP1-217ENST00000593168 THOC6Q86W42 341 aaKnown RBP13.04□□□□□ -0.32
VMP1-217ENST00000593168 SYTL1Q8IYJ3 562 aa13.04□□□□□ -0.32
VMP1-217ENST00000593168 PHACTR4Q8IZ21 702 aa13.04□□□□□ -0.32
VMP1-217ENST00000593168 RAB42Q8N4Z0 105 aa13.04□□□□□ -0.32
VMP1-217ENST00000593168 OR4F6Q8NGB9 312 aa13.04□□□□□ -0.32
VMP1-217ENST00000593168 CCL4L1Q8NHW4 92 aa13.04□□□□□ -0.32
VMP1-217ENST00000593168 SETD7Q8WTS6 366 aaKnown RBP13.04□□□□□ -0.32
VMP1-217ENST00000593168 PYCR2Q96C36 320 aa13.04□□□□□ -0.32
VMP1-217ENST00000593168 MAELQ96JY0 434 aaKnown RBP13.04□□□□□ -0.32
VMP1-217ENST00000593168 RILPQ96NA2 401 aa13.04□□□□□ -0.32
VMP1-217ENST00000593168 CAMK1GQ96NX5 476 aa13.04□□□□□ -0.32
VMP1-217ENST00000593168 LRRC37BQ96QE4 947 aa13.04□□□□□ -0.32
VMP1-217ENST00000593168 SGPP1Q9BX95 441 aa13.04□□□□□ -0.32
VMP1-217ENST00000593168 MEAF6Q9HAF1 191 aa13.04□□□□□ -0.32
VMP1-217ENST00000593168 TCF7L2Q9NQB0 619 aa13.04□□□□□ -0.32
VMP1-217ENST00000593168 INTS7Q9NVH2 962 aaKnown RBP13.04□□□□□ -0.32
VMP1-217ENST00000593168 GPRC5BQ9NZH0 403 aa13.04□□□□□ -0.32
VMP1-217ENST00000593168 TBC1D29Q9UFV1 150 aa13.04□□□□□ -0.32
VMP1-217ENST00000593168 TRPS1Q9UHF7 1281 aa13.04□□□□□ -0.32
VMP1-217ENST00000593168 FIS1Q9Y3D6 152 aa13.04□□□□□ -0.32
VMP1-217ENST00000593168 DNAJC15Q9Y5T4 150 aa13.04□□□□□ -0.32
VMP1-217ENST00000593168 COLEC10Q9Y6Z7 277 aa13.04□□□□□ -0.32
VMP1-217ENST00000593168 LOC400499M0QZD8 3231 aa13.03□□□□□ -0.32
VMP1-217ENST00000593168 PTPRBP23467 1997 aa13.03□□□□□ -0.32
VMP1-217ENST00000593168 A6NCN8 305 aa13.03□□□□□ -0.32
VMP1-217ENST00000593168 ERICH4A6NGS2 130 aa13.03□□□□□ -0.32
VMP1-217ENST00000593168 E7ENX8 843 aa13.03□□□□□ -0.32
VMP1-217ENST00000593168 SDHDO14521 159 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms