RNA–Protein interactions for RNA: ENST00000592333.1

CCDC43-205, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 692 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-205ENST00000592333 ZSCAN5DPP0CG00 497 aa18.06■□□□□ 0.48
CCDC43-205ENST00000592333 HSD17B2P37059 387 aa18.06■□□□□ 0.48
CCDC43-205ENST00000592333 CARSP49589 748 aaKnown RBP18.06■□□□□ 0.48
CCDC43-205ENST00000592333 BASP1P80723 227 aaKnown RBP18.06■□□□□ 0.48
CCDC43-205ENST00000592333 RAPSNQ13702 412 aa18.06■□□□□ 0.48
CCDC43-205ENST00000592333 GBX1Q14549 363 aa18.06■□□□□ 0.48
CCDC43-205ENST00000592333 ARHGAP19Q14CB8 494 aa18.06■□□□□ 0.48
CCDC43-205ENST00000592333 C4orf17Q53FE4 359 aa18.06■□□□□ 0.48
CCDC43-205ENST00000592333 IRAK1BP1Q5VVH5 260 aa18.06■□□□□ 0.48
CCDC43-205ENST00000592333 GSTA5Q7RTV2 222 aa18.06■□□□□ 0.48
CCDC43-205ENST00000592333 PRUNE1Q86TP1 453 aa18.06■□□□□ 0.48
CCDC43-205ENST00000592333 LDB1Q86U70 411 aaPredicted RBP18.06■□□□□ 0.48
CCDC43-205ENST00000592333 OR2L3Q8NG85 312 aa18.06■□□□□ 0.48
CCDC43-205ENST00000592333 OR2A1Q8NGT9 310 aa18.06■□□□□ 0.48
CCDC43-205ENST00000592333 PPP4R1Q8TF05 950 aa18.06■□□□□ 0.48
CCDC43-205ENST00000592333 BIRC8Q96P09 236 aa18.06■□□□□ 0.48
CCDC43-205ENST00000592333 IL17FQ96PD4 163 aa18.06■□□□□ 0.48
CCDC43-205ENST00000592333 CDC23Q9UJX2 597 aa18.06■□□□□ 0.48
CCDC43-205ENST00000592333 KLHL20Q9Y2M5 609 aa18.06■□□□□ 0.48
CCDC43-205ENST00000592333 PCDH17O14917 1159 aa18.05■□□□□ 0.48
CCDC43-205ENST00000592333 SEMA7AO75326 666 aa18.05■□□□□ 0.48
CCDC43-205ENST00000592333 OGNP20774 298 aaKnown RBP18.05■□□□□ 0.48
CCDC43-205ENST00000592333 NMBRP28336 390 aa18.05■□□□□ 0.48
CCDC43-205ENST00000592333 RELAQ04206 551 aa18.05■□□□□ 0.48
CCDC43-205ENST00000592333 SLC9A5Q14940 896 aa18.05■□□□□ 0.48
CCDC43-205ENST00000592333 WASHC2DQ5SRD0 308 aa18.05■□□□□ 0.48
CCDC43-205ENST00000592333 AGAP7PQ5VUJ5 663 aa18.05■□□□□ 0.48
CCDC43-205ENST00000592333 COX15Q7KZN9 410 aa18.05■□□□□ 0.48
CCDC43-205ENST00000592333 RNF44Q7L0R7 432 aa18.05■□□□□ 0.48
CCDC43-205ENST00000592333 FAM20CQ8IXL6 584 aa18.05■□□□□ 0.48
CCDC43-205ENST00000592333 SPC24Q8NBT2 197 aa18.05■□□□□ 0.48
CCDC43-205ENST00000592333 SKA2Q8WVK7 121 aaPredicted RBP18.05■□□□□ 0.48
CCDC43-205ENST00000592333 MVB12AQ96EY5 273 aa18.05■□□□□ 0.48
CCDC43-205ENST00000592333 AGAP4Q96P64 663 aa18.05■□□□□ 0.48
CCDC43-205ENST00000592333 SLC6A20Q9NP91 592 aa18.05■□□□□ 0.48
CCDC43-205ENST00000592333 AGPAT4Q9NRZ5 378 aa18.05■□□□□ 0.48
CCDC43-205ENST00000592333 UTP6Q9NYH9 597 aaKnown RBP18.05■□□□□ 0.48
CCDC43-205ENST00000592333 KLHL42Q9P2K6 505 aa18.05■□□□□ 0.48
CCDC43-205ENST00000592333 FBXL4Q9UKA2 621 aa18.05■□□□□ 0.48
CCDC43-205ENST00000592333 SOX13Q9UN79 622 aa18.05■□□□□ 0.48
CCDC43-205ENST00000592333 HS3ST3B1Q9Y662 390 aa18.05■□□□□ 0.48
CCDC43-205ENST00000592333 NUP210LQ5VU65 1888 aa18.05■□□□□ 0.48
CCDC43-205ENST00000592333 CCDC88CQ9P219 2028 aa18.05■□□□□ 0.48
CCDC43-205ENST00000592333 UTP20O75691 2785 aaKnown RBP18.04■□□□□ 0.48
CCDC43-205ENST00000592333 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP18.04■□□□□ 0.48
CCDC43-205ENST00000592333 MAGEB16A2A368 324 aa18.04■□□□□ 0.48
CCDC43-205ENST00000592333 HYKKA2RU49 373 aa18.04■□□□□ 0.48
CCDC43-205ENST00000592333 ZNF839A8K0R7 811 aa18.04■□□□□ 0.48
CCDC43-205ENST00000592333 SOCS6O14544 535 aa18.04■□□□□ 0.48
CCDC43-205ENST00000592333 CTSVO60911 334 aa18.04■□□□□ 0.48
CCDC43-205ENST00000592333 VAPBO95292 243 aa18.04■□□□□ 0.48
CCDC43-205ENST00000592333 FGGP02679 453 aa18.04■□□□□ 0.48
CCDC43-205ENST00000592333 ERGP11308 486 aa18.04■□□□□ 0.48
CCDC43-205ENST00000592333 PAMP19021 973 aa18.04■□□□□ 0.48
CCDC43-205ENST00000592333 ITGA3P26006 1051 aa18.04■□□□□ 0.48
CCDC43-205ENST00000592333 ARNTP27540 789 aa18.04■□□□□ 0.48
CCDC43-205ENST00000592333 CMPK1P30085 196 aa18.04■□□□□ 0.48
CCDC43-205ENST00000592333 MAGEA6P43360 314 aa18.04■□□□□ 0.48
CCDC43-205ENST00000592333 EIF3BP55884 814 aaKnown RBP18.04■□□□□ 0.48
CCDC43-205ENST00000592333 TUBB8Q3ZCM7 444 aa18.04■□□□□ 0.48
CCDC43-205ENST00000592333 ANKRD20A4Q4UJ75 823 aa18.04■□□□□ 0.48
CCDC43-205ENST00000592333 PRR30Q53SZ7 412 aaPredicted RBP18.04■□□□□ 0.48
CCDC43-205ENST00000592333 CTSL3PQ5NE16 218 aa18.04■□□□□ 0.48
CCDC43-205ENST00000592333 KIAA0930Q6ICG6 404 aaPredicted RBP18.04■□□□□ 0.48
CCDC43-205ENST00000592333 KIRREL2Q6UWL6 708 aa18.04■□□□□ 0.48
CCDC43-205ENST00000592333 NEK10Q6ZWH5 1172 aa18.04■□□□□ 0.48
CCDC43-205ENST00000592333 C2orf73Q8N5S3 287 aaPredicted RBP18.04■□□□□ 0.48
CCDC43-205ENST00000592333 TRIM58Q8NG06 486 aa18.04■□□□□ 0.48
CCDC43-205ENST00000592333 LPGAT1Q92604 370 aa18.04■□□□□ 0.48
CCDC43-205ENST00000592333 WDR77Q9BQA1 342 aaPredicted RBP18.04■□□□□ 0.48
CCDC43-205ENST00000592333 LHPPQ9H008 270 aa18.04■□□□□ 0.48
CCDC43-205ENST00000592333 ZNF304Q9HCX3 659 aa18.04■□□□□ 0.48
CCDC43-205ENST00000592333 FAM114A2Q9NRY5 505 aa18.04■□□□□ 0.48
CCDC43-205ENST00000592333 ASF1BQ9NVP2 202 aa18.04■□□□□ 0.48
CCDC43-205ENST00000592333 LUZP4Q9P127 313 aa18.04■□□□□ 0.48
CCDC43-205ENST00000592333 MAP10Q9P2G4 905 aa18.04■□□□□ 0.48
CCDC43-205ENST00000592333 PCDHGA10Q9Y5H3 936 aa18.04■□□□□ 0.48
CCDC43-205ENST00000592333 COPG1Q9Y678 874 aaKnown RBP18.04■□□□□ 0.48
CCDC43-205ENST00000592333 NFS1Q9Y697 457 aa18.04■□□□□ 0.48
CCDC43-205ENST00000592333 ICE1Q9Y2F5 2266 aa18.03■□□□□ 0.48
CCDC43-205ENST00000592333 IGLV3-12A0A075B6K2 115 aa18.03■□□□□ 0.48
CCDC43-205ENST00000592333 OR2A25A4D2G3 310 aa18.03■□□□□ 0.48
CCDC43-205ENST00000592333 PRPF4O43172 522 aaKnown RBP eCLIP18.03■□□□□ 0.48
CCDC43-205ENST00000592333 CRADDP78560 199 aa18.03■□□□□ 0.48
CCDC43-205ENST00000592333 OCA2Q04671 838 aa18.03■□□□□ 0.48
CCDC43-205ENST00000592333 MUM1Q2TAK8 710 aa18.03■□□□□ 0.48
CCDC43-205ENST00000592333 EIF2S3LQ2VIR3 472 aaKnown RBP18.03■□□□□ 0.48
CCDC43-205ENST00000592333 B3GNTL1Q67FW5 361 aaPredicted RBP18.03■□□□□ 0.48
CCDC43-205ENST00000592333 TAX1BP1Q86VP1 789 aa18.03■□□□□ 0.48
CCDC43-205ENST00000592333 CISD2Q8N5K1 135 aaKnown RBP18.03■□□□□ 0.48
CCDC43-205ENST00000592333 OR9A1PQ8NGU1 263 aa18.03■□□□□ 0.48
CCDC43-205ENST00000592333 PRR7Q8TB68 274 aa18.03■□□□□ 0.48
CCDC43-205ENST00000592333 SMPDL3AQ92484 453 aa18.03■□□□□ 0.48
CCDC43-205ENST00000592333 MFSD3Q96ES6 412 aa18.03■□□□□ 0.48
CCDC43-205ENST00000592333 ZFYVE21Q9BQ24 234 aa18.03■□□□□ 0.48
CCDC43-205ENST00000592333 INTS10Q9NVR2 710 aaKnown RBP18.03■□□□□ 0.48
CCDC43-205ENST00000592333 ZNF282Q9UDV7 671 aaPredicted RBP18.03■□□□□ 0.48
CCDC43-205ENST00000592333 CDC14AQ9UNH5 594 aa18.03■□□□□ 0.48
CCDC43-205ENST00000592333 UNC79Q9P2D8 2635 aa18.03■□□□□ 0.48
CCDC43-205ENST00000592333 A0A1W2PPV9 198 aa18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms