RNA–Protein interactions for RNA: ENST00000591383.1

VPS4B-205, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 5

Gene VPS4B, Length 701 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-205ENST00000591383 RNF215Q9Y6U7 377 aa6.24□□□□□ -1.41
VPS4B-205ENST00000591383 CACNA1AO00555 2505 aa6.24□□□□□ -1.41
VPS4B-205ENST00000591383 ASXL3Q9C0F0 2248 aa6.23□□□□□ -1.41
VPS4B-205ENST00000591383 RP1P56715 2156 aa6.23□□□□□ -1.41
VPS4B-205ENST00000591383 LY6G6EA0A0G2JKS1 128 aa6.23□□□□□ -1.41
VPS4B-205ENST00000591383 KIR2DS5A0A0G2JLQ3 304 aa6.23□□□□□ -1.41
VPS4B-205ENST00000591383 PRAMEF33A0A0G2JMD5 474 aa6.23□□□□□ -1.41
VPS4B-205ENST00000591383 A0A0G2JNG1 304 aa6.23□□□□□ -1.41
VPS4B-205ENST00000591383 PABPN1LA6NDY0 278 aaKnown RBP6.23□□□□□ -1.41
VPS4B-205ENST00000591383 PRR19A6NJB7 356 aa6.23□□□□□ -1.41
VPS4B-205ENST00000591383 KIR2DS3K7RE56 304 aa6.23□□□□□ -1.41
VPS4B-205ENST00000591383 KPNA5O15131 536 aa6.23□□□□□ -1.41
VPS4B-205ENST00000591383 PHGDHO43175 533 aaKnown RBP6.23□□□□□ -1.41
VPS4B-205ENST00000591383 TNFSF14O43557 240 aa6.23□□□□□ -1.41
VPS4B-205ENST00000591383 CBFA2T3O75081 653 aa6.23□□□□□ -1.41
VPS4B-205ENST00000591383 AHSGP02765 367 aa6.23□□□□□ -1.41
VPS4B-205ENST00000591383 GSNP06396 782 aa6.23□□□□□ -1.41
VPS4B-205ENST00000591383 ABHD2P08910 425 aa6.23□□□□□ -1.41
VPS4B-205ENST00000591383 FTH1P19P0C7X4 201 aa6.23□□□□□ -1.41
VPS4B-205ENST00000591383 CKMT1AP12532 417 aa6.23□□□□□ -1.41
VPS4B-205ENST00000591383 BRAFP15056 766 aa6.23□□□□□ -1.41
VPS4B-205ENST00000591383 CKMT2P17540 419 aa6.23□□□□□ -1.41
VPS4B-205ENST00000591383 CSRP1P21291 193 aaKnown RBP6.23□□□□□ -1.41
VPS4B-205ENST00000591383 SDHBP21912 280 aa6.23□□□□□ -1.41
VPS4B-205ENST00000591383 FDXRP22570 491 aa6.23□□□□□ -1.41
VPS4B-205ENST00000591383 AOAHP28039 575 aa6.23□□□□□ -1.41
VPS4B-205ENST00000591383 GABRB3P28472 473 aa6.23□□□□□ -1.41
VPS4B-205ENST00000591383 PDHA2P29803 388 aa6.23□□□□□ -1.41
VPS4B-205ENST00000591383 GMPRP36959 345 aa6.23□□□□□ -1.41
VPS4B-205ENST00000591383 LEPRP48357 1165 aaKnown RBP6.23□□□□□ -1.41
VPS4B-205ENST00000591383 SERPINB8P50452 374 aa6.23□□□□□ -1.41
VPS4B-205ENST00000591383 DUSP3P51452 185 aaPredicted RBP6.23□□□□□ -1.41
VPS4B-205ENST00000591383 PGGT1BP53609 377 aa6.23□□□□□ -1.41
VPS4B-205ENST00000591383 LIMK2P53671 638 aa6.23□□□□□ -1.41
VPS4B-205ENST00000591383 GPR85P60893 370 aa6.23□□□□□ -1.41
VPS4B-205ENST00000591383 UBE2IP63279 158 aaKnown RBP6.23□□□□□ -1.41
VPS4B-205ENST00000591383 RPA4Q13156 261 aa6.23□□□□□ -1.41
VPS4B-205ENST00000591383 PIN1Q13526 163 aaPredicted RBP6.23□□□□□ -1.41
VPS4B-205ENST00000591383 GPR18Q14330 331 aa6.23□□□□□ -1.41
VPS4B-205ENST00000591383 KIR2DS5Q14953 304 aa6.23□□□□□ -1.41
VPS4B-205ENST00000591383 CLCA4Q14CN2 919 aa6.23□□□□□ -1.41
VPS4B-205ENST00000591383 TRIP6Q15654 476 aaKnown RBP6.23□□□□□ -1.41
VPS4B-205ENST00000591383 RPE65Q16518 533 aa6.23□□□□□ -1.41
VPS4B-205ENST00000591383 AMZ1Q400G9 498 aa6.23□□□□□ -1.41
VPS4B-205ENST00000591383 ACSBG2Q5FVE4 666 aa6.23□□□□□ -1.41
VPS4B-205ENST00000591383 AGAP9Q5VTM2 703 aa6.23□□□□□ -1.41
VPS4B-205ENST00000591383 ZNF787Q6DD87 383 aa6.23□□□□□ -1.41
VPS4B-205ENST00000591383 EMBQ6PCB8 327 aa6.23□□□□□ -1.41
VPS4B-205ENST00000591383 PIWIL4Q7Z3Z4 852 aaKnown RBP6.23□□□□□ -1.41
VPS4B-205ENST00000591383 GALNT7Q86SF2 657 aa6.23□□□□□ -1.41
VPS4B-205ENST00000591383 SLC9B2Q86UD5 537 aa6.23□□□□□ -1.41
VPS4B-205ENST00000591383 ZBTB46Q86UZ6 589 aa6.23□□□□□ -1.41
VPS4B-205ENST00000591383 SFRP1Q8N474 314 aa6.23□□□□□ -1.41
VPS4B-205ENST00000591383 ARL14Q8N4G2 192 aa6.23□□□□□ -1.41
VPS4B-205ENST00000591383 EIF1ADQ8N9N8 165 aaKnown RBP6.23□□□□□ -1.41
VPS4B-205ENST00000591383 FAM181AQ8N9Y4 354 aa6.23□□□□□ -1.41
VPS4B-205ENST00000591383 AVL9Q8NBF6 648 aa6.23□□□□□ -1.41
VPS4B-205ENST00000591383 OR5AR1Q8NGP9 310 aa6.23□□□□□ -1.41
VPS4B-205ENST00000591383 OR10G6Q8NH81 332 aa6.23□□□□□ -1.41
VPS4B-205ENST00000591383 CD200R1Q8TD46 325 aa6.23□□□□□ -1.41
VPS4B-205ENST00000591383 ASZ1Q8WWH4 475 aa6.23□□□□□ -1.41
VPS4B-205ENST00000591383 KCNJ9Q92806 393 aa6.23□□□□□ -1.41
VPS4B-205ENST00000591383 LINGO1Q96FE5 620 aa6.23□□□□□ -1.41
VPS4B-205ENST00000591383 TSPAN17Q96FV3 270 aa6.23□□□□□ -1.41
VPS4B-205ENST00000591383 COX4I2Q96KJ9 171 aa6.23□□□□□ -1.41
VPS4B-205ENST00000591383 SLC38A3Q99624 504 aa6.23□□□□□ -1.41
VPS4B-205ENST00000591383 OLFM1Q99784 485 aa6.23□□□□□ -1.41
VPS4B-205ENST00000591383 CCDC3Q9BQI4 270 aa6.23□□□□□ -1.41
VPS4B-205ENST00000591383 PARD6BQ9BYG5 372 aa6.23□□□□□ -1.41
VPS4B-205ENST00000591383 CAB39LQ9H9S4 337 aa6.23□□□□□ -1.41
VPS4B-205ENST00000591383 TAS2R13Q9NYV9 303 aa6.23□□□□□ -1.41
VPS4B-205ENST00000591383 MOCS1Q9NZB8 636 aa6.23□□□□□ -1.41
VPS4B-205ENST00000591383 GALPQ9UBC7 116 aa6.23□□□□□ -1.41
VPS4B-205ENST00000591383 CPNE7Q9UBL6 633 aa6.23□□□□□ -1.41
VPS4B-205ENST00000591383 ACSL5Q9ULC5 683 aa6.23□□□□□ -1.41
VPS4B-205ENST00000591383 PLAGL1Q9UM63 463 aa6.23□□□□□ -1.41
VPS4B-205ENST00000591383 ASF1AQ9Y294 204 aa6.23□□□□□ -1.41
VPS4B-205ENST00000591383 TDRKHQ9Y2W6 561 aaKnown RBP6.23□□□□□ -1.41
VPS4B-205ENST00000591383 U3KQA8 63 aa6.23□□□□□ -1.41
VPS4B-205ENST00000591383 NCOR2Q9Y618 2525 aa6.23□□□□□ -1.41
VPS4B-205ENST00000591383 SPEGQ15772 3267 aa6.22□□□□□ -1.41
VPS4B-205ENST00000591383 C17orf113A0A1B0GUU1 675 aa6.22□□□□□ -1.41
VPS4B-205ENST00000591383 SLC5A10A0PJK1 596 aa6.22□□□□□ -1.41
VPS4B-205ENST00000591383 SHISA3A0PJX4 238 aa6.22□□□□□ -1.41
VPS4B-205ENST00000591383 KRT87PA6NCN2 255 aa6.22□□□□□ -1.41
VPS4B-205ENST00000591383 NPEPPSL1A6NEC2 478 aa6.22□□□□□ -1.41
VPS4B-205ENST00000591383 OR5K4A6NMS3 321 aa6.22□□□□□ -1.41
VPS4B-205ENST00000591383 NUDT21O43809 227 aaKnown RBP6.22□□□□□ -1.41
VPS4B-205ENST00000591383 DUX1O43812 170 aa6.22□□□□□ -1.41
VPS4B-205ENST00000591383 KCNJ13O60928 360 aa6.22□□□□□ -1.41
VPS4B-205ENST00000591383 PRKD3O94806 890 aa6.22□□□□□ -1.41
VPS4B-205ENST00000591383 KCNK5O95279 499 aa6.22□□□□□ -1.41
VPS4B-205ENST00000591383 SYF2O95926 243 aaKnown RBP6.22□□□□□ -1.41
VPS4B-205ENST00000591383 CBX7O95931 251 aa6.22□□□□□ -1.41
VPS4B-205ENST00000591383 RPN2P04844 631 aa6.22□□□□□ -1.41
VPS4B-205ENST00000591383 RPLP0P05388 317 aaKnown RBP6.22□□□□□ -1.41
VPS4B-205ENST00000591383 CD3EP07766 207 aa6.22□□□□□ -1.41
VPS4B-205ENST00000591383 ITGA2BP08514 1039 aa6.22□□□□□ -1.41
VPS4B-205ENST00000591383 ALDH4A1P30038 563 aa6.22□□□□□ -1.41
VPS4B-205ENST00000591383 ATP5DP30049 168 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms