RNA–Protein interactions for RNA: ENST00000590499.1

SMAD4-211, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-211ENST00000590499 RPL21P46778 160 aaKnown RBP10.81□□□□□ -0.68
SMAD4-211ENST00000590499 GABRA4P48169 554 aa10.81□□□□□ -0.68
SMAD4-211ENST00000590499 ARL4DP49703 201 aa10.81□□□□□ -0.68
SMAD4-211ENST00000590499 KIR2DS3Q14952 304 aa10.81□□□□□ -0.68
SMAD4-211ENST00000590499 SLC5A12Q1EHB4 618 aa10.81□□□□□ -0.68
SMAD4-211ENST00000590499 BBS9Q3SYG4 887 aa10.81□□□□□ -0.68
SMAD4-211ENST00000590499 CCSMST1Q4G0I0 132 aa10.81□□□□□ -0.68
SMAD4-211ENST00000590499 ACSBG2Q5FVE4 666 aa10.81□□□□□ -0.68
SMAD4-211ENST00000590499 SPANXN3Q5MJ09 141 aa10.81□□□□□ -0.68
SMAD4-211ENST00000590499 TMTC4Q5T4D3 741 aa10.81□□□□□ -0.68
SMAD4-211ENST00000590499 STEAP4Q687X5 459 aa10.81□□□□□ -0.68
SMAD4-211ENST00000590499 SYT10Q6XYQ8 523 aa10.81□□□□□ -0.68
SMAD4-211ENST00000590499 KCNMB4Q86W47 210 aa10.81□□□□□ -0.68
SMAD4-211ENST00000590499 ALDH16A1Q8IZ83 802 aa10.81□□□□□ -0.68
SMAD4-211ENST00000590499 PDIK1LQ8N165 341 aa10.81□□□□□ -0.68
SMAD4-211ENST00000590499 C19orf47Q8N9M1 422 aaKnown RBP10.81□□□□□ -0.68
SMAD4-211ENST00000590499 LMNTD1Q8N9Z9 388 aa10.81□□□□□ -0.68
SMAD4-211ENST00000590499 C2CD4AQ8NCU7 369 aaPredicted RBP10.81□□□□□ -0.68
SMAD4-211ENST00000590499 SPATA4Q8NEY3 305 aa10.81□□□□□ -0.68
SMAD4-211ENST00000590499 OR2L8Q8NGY9 312 aa10.81□□□□□ -0.68
SMAD4-211ENST00000590499 CFAP61Q8NHU2 1237 aa10.81□□□□□ -0.68
SMAD4-211ENST00000590499 DENND1AQ8TEH3 1009 aa10.81□□□□□ -0.68
SMAD4-211ENST00000590499 KCNJ9Q92806 393 aa10.81□□□□□ -0.68
SMAD4-211ENST00000590499 FAM136AQ96C01 138 aa10.81□□□□□ -0.68
SMAD4-211ENST00000590499 IL17FQ96PD4 163 aa10.81□□□□□ -0.68
SMAD4-211ENST00000590499 FAM167BQ9BTA0 163 aa10.81□□□□□ -0.68
SMAD4-211ENST00000590499 GPN2Q9H9Y4 310 aaPredicted RBP10.81□□□□□ -0.68
SMAD4-211ENST00000590499 SYTL2Q9HCH5 934 aa10.81□□□□□ -0.68
SMAD4-211ENST00000590499 IARS2Q9NSE4 1012 aaKnown RBP10.81□□□□□ -0.68
SMAD4-211ENST00000590499 CIDEBQ9UHD4 219 aa10.81□□□□□ -0.68
SMAD4-211ENST00000590499 IL17BQ9UHF5 180 aa10.81□□□□□ -0.68
SMAD4-211ENST00000590499 LNPEPQ9UIQ6 1025 aa10.81□□□□□ -0.68
SMAD4-211ENST00000590499 TEX264Q9Y6I9 313 aa10.81□□□□□ -0.68
SMAD4-211ENST00000590499 ZNF462Q96JM2 2506 aa10.8□□□□□ -0.68
SMAD4-211ENST00000590499 A0A0J9YY10 115 aa10.8□□□□□ -0.68
SMAD4-211ENST00000590499 KRT87PA6NCN2 255 aa10.8□□□□□ -0.68
SMAD4-211ENST00000590499 ARHGEF33A8MVX0 844 aa10.8□□□□□ -0.68
SMAD4-211ENST00000590499 EFCAB8A8MWE9 144 aa10.8□□□□□ -0.68
SMAD4-211ENST00000590499 E7ESA3 106 aa10.8□□□□□ -0.68
SMAD4-211ENST00000590499 H3BMH7 237 aa10.8□□□□□ -0.68
SMAD4-211ENST00000590499 HCRTR1O43613 425 aa10.8□□□□□ -0.68
SMAD4-211ENST00000590499 PRICKLE3O43900 615 aaPredicted RBP10.8□□□□□ -0.68
SMAD4-211ENST00000590499 PSIP1O75475 530 aaKnown RBP10.8□□□□□ -0.68
SMAD4-211ENST00000590499 HAUS5O94927 633 aa10.8□□□□□ -0.68
SMAD4-211ENST00000590499 ERVK-10P10266 1014 aa10.8□□□□□ -0.68
SMAD4-211ENST00000590499 ERGP11308 486 aa10.8□□□□□ -0.68
SMAD4-211ENST00000590499 CD9P21926 228 aa10.8□□□□□ -0.68
SMAD4-211ENST00000590499 F8A1P23610 371 aa10.8□□□□□ -0.68
SMAD4-211ENST00000590499 CASQ1P31415 396 aa10.8□□□□□ -0.68
SMAD4-211ENST00000590499 ELK3P41970 407 aa10.8□□□□□ -0.68
SMAD4-211ENST00000590499 CYP4F2P78329 520 aa10.8□□□□□ -0.68
SMAD4-211ENST00000590499 TIAL1Q01085 375 aaKnown RBP eCLIP10.8□□□□□ -0.68
SMAD4-211ENST00000590499 FRG1Q14331 258 aaKnown RBP10.8□□□□□ -0.68
SMAD4-211ENST00000590499 HIF1AQ16665 826 aa10.8□□□□□ -0.68
SMAD4-211ENST00000590499 LINC00303Q3SY05 128 aa10.8□□□□□ -0.68
SMAD4-211ENST00000590499 EEF1AKMT2Q5JPI9 291 aaKnown RBP10.8□□□□□ -0.68
SMAD4-211ENST00000590499 CNSTQ6PJW8 725 aa10.8□□□□□ -0.68
SMAD4-211ENST00000590499 ZNF517Q6ZMY9 492 aaPredicted RBP10.8□□□□□ -0.68
SMAD4-211ENST00000590499 CDHR3Q6ZTQ4 885 aa10.8□□□□□ -0.68
SMAD4-211ENST00000590499 NEK10Q6ZWH5 1172 aa10.8□□□□□ -0.68
SMAD4-211ENST00000590499 ZNF572Q7Z3I7 529 aaPredicted RBP10.8□□□□□ -0.68
SMAD4-211ENST00000590499 GALNT7Q86SF2 657 aa10.8□□□□□ -0.68
SMAD4-211ENST00000590499 SLC38A9Q8NBW4 561 aa10.8□□□□□ -0.68
SMAD4-211ENST00000590499 OR1L3Q8NH93 324 aa10.8□□□□□ -0.68
SMAD4-211ENST00000590499 GSDMBQ8TAX9 411 aa10.8□□□□□ -0.68
SMAD4-211ENST00000590499 HMGCLL1Q8TB92 370 aa10.8□□□□□ -0.68
SMAD4-211ENST00000590499 CD200R1Q8TD46 325 aa10.8□□□□□ -0.68
SMAD4-211ENST00000590499 KIAA1143Q96AT1 154 aaPredicted RBP10.8□□□□□ -0.68
SMAD4-211ENST00000590499 RAD51AP1Q96B01 352 aa10.8□□□□□ -0.68
SMAD4-211ENST00000590499 LRRC39Q96DD0 335 aa10.8□□□□□ -0.68
SMAD4-211ENST00000590499 CERS2Q96G23 380 aa10.8□□□□□ -0.68
SMAD4-211ENST00000590499 LRFN5Q96NI6 719 aa10.8□□□□□ -0.68
SMAD4-211ENST00000590499 AARSD1Q9BTE6 412 aaKnown RBP10.8□□□□□ -0.68
SMAD4-211ENST00000590499 RAB11FIP5Q9BXF6 653 aa10.8□□□□□ -0.68
SMAD4-211ENST00000590499 TRIM31Q9BZY9 425 aa10.8□□□□□ -0.68
SMAD4-211ENST00000590499 KLHL25Q9H0H3 589 aa10.8□□□□□ -0.68
SMAD4-211ENST00000590499 FAM60AQ9NP50 221 aa10.8□□□□□ -0.68
SMAD4-211ENST00000590499 BRD7Q9NPI1 651 aa10.8□□□□□ -0.68
SMAD4-211ENST00000590499 CROTQ9UKG9 612 aa10.8□□□□□ -0.68
SMAD4-211ENST00000590499 CHMP2BQ9UQN3 213 aa10.8□□□□□ -0.68
SMAD4-211ENST00000590499 MRFAP1Q9Y605 127 aa10.8□□□□□ -0.68
SMAD4-211ENST00000590499 COMMD10Q9Y6G5 202 aa10.8□□□□□ -0.68
SMAD4-211ENST00000590499 ELOA3CA0A087WX78 387 aaPredicted RBP10.79□□□□□ -0.68
SMAD4-211ENST00000590499 A0A1W2PPV9 198 aa10.79□□□□□ -0.68
SMAD4-211ENST00000590499 ELOA3DA6NLF2 546 aaPredicted RBP10.79□□□□□ -0.68
SMAD4-211ENST00000590499 ZNF891A8MT65 544 aaPredicted RBP10.79□□□□□ -0.68
SMAD4-211ENST00000590499 TMEM150CB9EJG8 249 aa10.79□□□□□ -0.68
SMAD4-211ENST00000590499 E5RI56 91 aa10.79□□□□□ -0.68
SMAD4-211ENST00000590499 MYO1CO00159 1063 aa10.79□□□□□ -0.68
SMAD4-211ENST00000590499 RAD51CO43502 376 aa10.79□□□□□ -0.68
SMAD4-211ENST00000590499 CPNE3O75131 537 aaKnown RBP10.79□□□□□ -0.68
SMAD4-211ENST00000590499 SCRG1O75711 98 aa10.79□□□□□ -0.68
SMAD4-211ENST00000590499 C1QL1O75973 258 aa10.79□□□□□ -0.68
SMAD4-211ENST00000590499 MT-ND3P03897 115 aa10.79□□□□□ -0.68
SMAD4-211ENST00000590499 NTRK1P04629 796 aa10.79□□□□□ -0.68
SMAD4-211ENST00000590499 RORAP35398 523 aa10.79□□□□□ -0.68
SMAD4-211ENST00000590499 CCNFP41002 786 aa10.79□□□□□ -0.68
SMAD4-211ENST00000590499 ARL4CP56559 192 aa10.79□□□□□ -0.68
SMAD4-211ENST00000590499 MRPS25P82663 173 aaKnown RBP10.79□□□□□ -0.68
SMAD4-211ENST00000590499 C2orf54Q08AI8 447 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms