RNA–Protein interactions for RNA: ENST00000589990.1

PRKCSH-210, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 567 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-210ENST00000589990 CHERPQ8IWX8 916 aaKnown RBP12.16□□□□□ -0.46
PRKCSH-210ENST00000589990 OR4N4Q8N0Y3 316 aa12.16□□□□□ -0.46
PRKCSH-210ENST00000589990 ELMO1Q92556 727 aa12.16□□□□□ -0.46
PRKCSH-210ENST00000589990 MAGED4Q96JG8 741 aa12.16□□□□□ -0.46
PRKCSH-210ENST00000589990 SELENOSQ9BQE4 189 aa12.16□□□□□ -0.46
PRKCSH-210ENST00000589990 ZNF304Q9HCX3 659 aa12.16□□□□□ -0.46
PRKCSH-210ENST00000589990 BZW2Q9Y6E2 419 aaKnown RBP12.16□□□□□ -0.46
PRKCSH-210ENST00000589990 INTS1Q8N201 2190 aaKnown RBP12.15□□□□□ -0.46
PRKCSH-210ENST00000589990 SLC5A10A0PJK1 596 aa12.15□□□□□ -0.46
PRKCSH-210ENST00000589990 HYKKA2RU49 373 aa12.15□□□□□ -0.46
PRKCSH-210ENST00000589990 FITM1A5D6W6 292 aa12.15□□□□□ -0.46
PRKCSH-210ENST00000589990 OR5H15A6NDH6 313 aa12.15□□□□□ -0.46
PRKCSH-210ENST00000589990 IDSB3KWA1 339 aa12.15□□□□□ -0.46
PRKCSH-210ENST00000589990 NPIPA5E9PKD4 350 aa12.15□□□□□ -0.46
PRKCSH-210ENST00000589990 WFS1O76024 890 aa12.15□□□□□ -0.46
PRKCSH-210ENST00000589990 AP2A1O95782 977 aa12.15□□□□□ -0.46
PRKCSH-210ENST00000589990 UQCRHP07919 91 aa12.15□□□□□ -0.46
PRKCSH-210ENST00000589990 TPM1P09493 284 aa12.15□□□□□ -0.46
PRKCSH-210ENST00000589990 PSMB5P28074 263 aa12.15□□□□□ -0.46
PRKCSH-210ENST00000589990 CARSP49589 748 aaKnown RBP12.15□□□□□ -0.46
PRKCSH-210ENST00000589990 YBX1P67809 324 aaKnown RBP12.15□□□□□ -0.46
PRKCSH-210ENST00000589990 ZNF33BQ06732 778 aa12.15□□□□□ -0.46
PRKCSH-210ENST00000589990 PCOLCEQ15113 449 aa12.15□□□□□ -0.46
PRKCSH-210ENST00000589990 TAZQ16635 292 aa12.15□□□□□ -0.46
PRKCSH-210ENST00000589990 FIGNQ5HY92 759 aa12.15□□□□□ -0.46
PRKCSH-210ENST00000589990 ZNF766Q5HY98 468 aa12.15□□□□□ -0.46
PRKCSH-210ENST00000589990 FCRLBQ6BAA4 426 aa12.15□□□□□ -0.46
PRKCSH-210ENST00000589990 TAS2R42Q7RTR8 314 aa12.15□□□□□ -0.46
PRKCSH-210ENST00000589990 VRK3Q8IV63 474 aa12.15□□□□□ -0.46
PRKCSH-210ENST00000589990 VSTM4Q8IW00 320 aa12.15□□□□□ -0.46
PRKCSH-210ENST00000589990 TTC29Q8NA56 475 aaPredicted RBP12.15□□□□□ -0.46
PRKCSH-210ENST00000589990 AGAP11Q8TF27 550 aa12.15□□□□□ -0.46
PRKCSH-210ENST00000589990 IQCDQ96DY2 449 aa12.15□□□□□ -0.46
PRKCSH-210ENST00000589990 C10orf90Q96M02 699 aa12.15□□□□□ -0.46
PRKCSH-210ENST00000589990 GPR137Q96N19 417 aa12.15□□□□□ -0.46
PRKCSH-210ENST00000589990 SIGLEC12Q96PQ1 595 aa12.15□□□□□ -0.46
PRKCSH-210ENST00000589990 QKIQ96PU8 341 aaKnown RBP eCLIP12.15□□□□□ -0.46
PRKCSH-210ENST00000589990 GBA3Q9H227 469 aa12.15□□□□□ -0.46
PRKCSH-210ENST00000589990 VPS37BQ9H9H4 285 aa12.15□□□□□ -0.46
PRKCSH-210ENST00000589990 NPDC1Q9NQX5 325 aaPredicted RBP12.15□□□□□ -0.46
PRKCSH-210ENST00000589990 SMARCAL1Q9NZC9 954 aa12.15□□□□□ -0.46
PRKCSH-210ENST00000589990 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.15□□□□□ -0.46
PRKCSH-210ENST00000589990 IMPACTQ9P2X3 320 aa12.15□□□□□ -0.46
PRKCSH-210ENST00000589990 ZNF282Q9UDV7 671 aaPredicted RBP12.15□□□□□ -0.46
PRKCSH-210ENST00000589990 ZC3H7BQ9UGR2 993 aaKnown RBP12.15□□□□□ -0.46
PRKCSH-210ENST00000589990 POLG2Q9UHN1 485 aa12.15□□□□□ -0.46
PRKCSH-210ENST00000589990 CAPN11Q9UMQ6 739 aa12.15□□□□□ -0.46
PRKCSH-210ENST00000589990 NPIPA1Q9UND3 350 aa12.15□□□□□ -0.46
PRKCSH-210ENST00000589990 LUC7L2Q9Y383 392 aaKnown RBP12.15□□□□□ -0.46
PRKCSH-210ENST00000589990 HCFC1P51610 2035 aa12.15□□□□□ -0.47
PRKCSH-210ENST00000589990 IGLV3-12A0A075B6K2 115 aa12.14□□□□□ -0.47
PRKCSH-210ENST00000589990 A0A0J9YVX5 310 aa12.14□□□□□ -0.47
PRKCSH-210ENST00000589990 A0A1W2PQ72 361 aa12.14□□□□□ -0.47
PRKCSH-210ENST00000589990 OR51F1A6NGY5 319 aa12.14□□□□□ -0.47
PRKCSH-210ENST00000589990 LIN7AO14910 233 aaPredicted RBP12.14□□□□□ -0.47
PRKCSH-210ENST00000589990 MAN1A2O60476 641 aa12.14□□□□□ -0.47
PRKCSH-210ENST00000589990 H2AFZP0C0S5 128 aa12.14□□□□□ -0.47
PRKCSH-210ENST00000589990 PSMB4P28070 264 aa12.14□□□□□ -0.47
PRKCSH-210ENST00000589990 DNAJA1P31689 397 aaKnown RBP12.14□□□□□ -0.47
PRKCSH-210ENST00000589990 NR2C2P49116 596 aa12.14□□□□□ -0.47
PRKCSH-210ENST00000589990 RAB28P51157 221 aa12.14□□□□□ -0.47
PRKCSH-210ENST00000589990 ZNF75DP51815 510 aa12.14□□□□□ -0.47
PRKCSH-210ENST00000589990 IST1P53990 364 aa12.14□□□□□ -0.47
PRKCSH-210ENST00000589990 EMP2P54851 167 aa12.14□□□□□ -0.47
PRKCSH-210ENST00000589990 SNRPNP63162 240 aaKnown RBP12.14□□□□□ -0.47
PRKCSH-210ENST00000589990 OCA2Q04671 838 aa12.14□□□□□ -0.47
PRKCSH-210ENST00000589990 CACNG1Q06432 222 aa12.14□□□□□ -0.47
PRKCSH-210ENST00000589990 YOD1Q5VVQ6 348 aaPredicted RBP12.14□□□□□ -0.47
PRKCSH-210ENST00000589990 ZNF449Q6P9G9 518 aa12.14□□□□□ -0.47
PRKCSH-210ENST00000589990 H2AFVQ71UI9 128 aa12.14□□□□□ -0.47
PRKCSH-210ENST00000589990 FGD2Q7Z6J4 655 aa12.14□□□□□ -0.47
PRKCSH-210ENST00000589990 SLC35G2Q8TBE7 412 aa12.14□□□□□ -0.47
PRKCSH-210ENST00000589990 HEXDCQ8WVB3 486 aa12.14□□□□□ -0.47
PRKCSH-210ENST00000589990 CTNNBL1Q8WYA6 563 aaPredicted RBP12.14□□□□□ -0.47
PRKCSH-210ENST00000589990 SYN2Q92777 582 aaPredicted RBP12.14□□□□□ -0.47
PRKCSH-210ENST00000589990 SDCCAG3Q96C92 435 aa12.14□□□□□ -0.47
PRKCSH-210ENST00000589990 VPS50Q96JG6 964 aa12.14□□□□□ -0.47
PRKCSH-210ENST00000589990 RNF32Q9H0A6 362 aa12.14□□□□□ -0.47
PRKCSH-210ENST00000589990 KLHL1Q9NR64 748 aa12.14□□□□□ -0.47
PRKCSH-210ENST00000589990 ENAMQ9NRM1 1142 aa12.14□□□□□ -0.47
PRKCSH-210ENST00000589990 ANKRD10Q9NXR5 420 aa12.14□□□□□ -0.47
PRKCSH-210ENST00000589990 STMN3Q9NZ72 180 aa12.14□□□□□ -0.47
PRKCSH-210ENST00000589990 TNFRSF10DQ9UBN6 386 aa12.14□□□□□ -0.47
PRKCSH-210ENST00000589990 NSD1Q96L73 2696 aaPredicted RBP12.14□□□□□ -0.47
PRKCSH-210ENST00000589990 ABCA4P78363 2273 aa12.14□□□□□ -0.47
PRKCSH-210ENST00000589990 IGHV3-20A0A0C4DH32 117 aa12.13□□□□□ -0.47
PRKCSH-210ENST00000589990 SLCO2B1O94956 709 aa12.13□□□□□ -0.47
PRKCSH-210ENST00000589990 CRTAMO95727 393 aa12.13□□□□□ -0.47
PRKCSH-210ENST00000589990 EIF2S1P05198 315 aaKnown RBP12.13□□□□□ -0.47
PRKCSH-210ENST00000589990 IGFBP2P18065 325 aa12.13□□□□□ -0.47
PRKCSH-210ENST00000589990 CD9P21926 228 aa12.13□□□□□ -0.47
PRKCSH-210ENST00000589990 FBLP22087 321 aaKnown RBP12.13□□□□□ -0.47
PRKCSH-210ENST00000589990 FDXRP22570 491 aa12.13□□□□□ -0.47
PRKCSH-210ENST00000589990 RBL1P28749 1068 aa12.13□□□□□ -0.47
PRKCSH-210ENST00000589990 GEMP55040 296 aa12.13□□□□□ -0.47
PRKCSH-210ENST00000589990 ZBED6P86452 979 aa12.13□□□□□ -0.47
PRKCSH-210ENST00000589990 SF1Q15637 639 aaKnown RBP12.13□□□□□ -0.47
PRKCSH-210ENST00000589990 SYT16Q17RD7 645 aa12.13□□□□□ -0.47
PRKCSH-210ENST00000589990 GPR33Q49SQ1 333 aa12.13□□□□□ -0.47
PRKCSH-210ENST00000589990 TCTE1Q5JU00 501 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms