RNA–Protein interactions for RNA: ENST00000589116.1

CCBE1-203, Transcript of collagen and calcium binding EGF domains 1, humanhuman

TSL 1 (best)

Gene CCBE1, Length 1,691 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCBE1-203ENST00000589116 TBC1D17Q9HA65 648 aa11.69□□□□□ -0.54
CCBE1-203ENST00000589116 SLC40A1Q9NP59 571 aa11.69□□□□□ -0.54
CCBE1-203ENST00000589116 MRPL40Q9NQ50 206 aaKnown RBP11.69□□□□□ -0.54
CCBE1-203ENST00000589116 CCDC177Q9NQR7 707 aaPredicted RBP11.69□□□□□ -0.54
CCBE1-203ENST00000589116 AIG1Q9NVV5 245 aa11.69□□□□□ -0.54
CCBE1-203ENST00000589116 C2orf42Q9NWW7 574 aa11.69□□□□□ -0.54
CCBE1-203ENST00000589116 NDE1Q9NXR1 346 aa11.69□□□□□ -0.54
CCBE1-203ENST00000589116 ZNF490Q9ULM2 529 aaPredicted RBP11.69□□□□□ -0.54
CCBE1-203ENST00000589116 PSMD13Q9UNM6 376 aa11.69□□□□□ -0.54
CCBE1-203ENST00000589116 KCNK6Q9Y257 313 aa11.69□□□□□ -0.54
CCBE1-203ENST00000589116 CCL27Q9Y4X3 112 aa11.69□□□□□ -0.54
CCBE1-203ENST00000589116 LRP4O75096 1905 aa11.69□□□□□ -0.54
CCBE1-203ENST00000589116 IGHV1OR15-9A0A0B4J2B8 117 aa11.68□□□□□ -0.54
CCBE1-203ENST00000589116 LOC100653049A0A140TA62 436 aa11.68□□□□□ -0.54
CCBE1-203ENST00000589116 NPIPB8E9PQR5 432 aa11.68□□□□□ -0.54
CCBE1-203ENST00000589116 H0Y8X5 98 aa11.68□□□□□ -0.54
CCBE1-203ENST00000589116 KRT34O76011 436 aa11.68□□□□□ -0.54
CCBE1-203ENST00000589116 PDGFBP01127 241 aaPredicted RBP11.68□□□□□ -0.54
CCBE1-203ENST00000589116 PCSK2P16519 638 aa11.68□□□□□ -0.54
CCBE1-203ENST00000589116 GPX3P22352 226 aa11.68□□□□□ -0.54
CCBE1-203ENST00000589116 CPOXP36551 454 aa11.68□□□□□ -0.54
CCBE1-203ENST00000589116 STX5Q13190 355 aa11.68□□□□□ -0.54
CCBE1-203ENST00000589116 RPS6KA2Q15349 733 aa11.68□□□□□ -0.54
CCBE1-203ENST00000589116 CPSF6Q16630 551 aaKnown RBP eCLIP11.68□□□□□ -0.54
CCBE1-203ENST00000589116 IMPG1Q17R60 797 aa11.68□□□□□ -0.54
CCBE1-203ENST00000589116 UAP1L1Q3KQV9 507 aa11.68□□□□□ -0.54
CCBE1-203ENST00000589116 XKR6Q5GH73 641 aa11.68□□□□□ -0.54
CCBE1-203ENST00000589116 C10orf62Q5T681 223 aaPredicted RBP11.68□□□□□ -0.54
CCBE1-203ENST00000589116 FRG2Q64ET8 278 aa11.68□□□□□ -0.54
CCBE1-203ENST00000589116 SCIMPQ6UWF3 145 aa11.68□□□□□ -0.54
CCBE1-203ENST00000589116 WASH2PQ6VEQ5 465 aa11.68□□□□□ -0.54
CCBE1-203ENST00000589116 LONP2Q86WA8 852 aa11.68□□□□□ -0.54
CCBE1-203ENST00000589116 RGL4Q8IZJ4 473 aa11.68□□□□□ -0.54
CCBE1-203ENST00000589116 SFRP1Q8N474 314 aa11.68□□□□□ -0.54
CCBE1-203ENST00000589116 CAMKK1Q8N5S9 505 aa11.68□□□□□ -0.54
CCBE1-203ENST00000589116 FNDC5Q8NAU1 212 aa11.68□□□□□ -0.54
CCBE1-203ENST00000589116 PJA1Q8NG27 643 aa11.68□□□□□ -0.54
CCBE1-203ENST00000589116 HMGCLL1Q8TB92 370 aa11.68□□□□□ -0.54
CCBE1-203ENST00000589116 SELENOMQ8WWX9 145 aa11.68□□□□□ -0.54
CCBE1-203ENST00000589116 OR1E3Q8WZA6 343 aa11.68□□□□□ -0.54
CCBE1-203ENST00000589116 UTP4Q969X6 686 aaKnown RBP11.68□□□□□ -0.54
CCBE1-203ENST00000589116 BIRC7Q96CA5 298 aa11.68□□□□□ -0.54
CCBE1-203ENST00000589116 WDR34Q96EX3 536 aa11.68□□□□□ -0.54
CCBE1-203ENST00000589116 PDXPQ96GD0 296 aa11.68□□□□□ -0.54
CCBE1-203ENST00000589116 C12orf66Q96MD2 445 aa11.68□□□□□ -0.54
CCBE1-203ENST00000589116 FRG2BQ96QU4 278 aa11.68□□□□□ -0.54
CCBE1-203ENST00000589116 SLC25A23Q9BV35 468 aa11.68□□□□□ -0.54
CCBE1-203ENST00000589116 GPR174Q9BXC1 333 aa11.68□□□□□ -0.54
CCBE1-203ENST00000589116 RAB11FIP5Q9BXF6 653 aa11.68□□□□□ -0.54
CCBE1-203ENST00000589116 EHD1Q9H4M9 534 aa11.68□□□□□ -0.54
CCBE1-203ENST00000589116 MVB12BQ9H7P6 319 aa11.68□□□□□ -0.54
CCBE1-203ENST00000589116 EBF2Q9HAK2 575 aa11.68□□□□□ -0.54
CCBE1-203ENST00000589116 WASH6PQ9NQA3 447 aa11.68□□□□□ -0.54
CCBE1-203ENST00000589116 GIMAP2Q9UG22 337 aa11.68□□□□□ -0.54
CCBE1-203ENST00000589116 CA5BQ9Y2D0 317 aa11.68□□□□□ -0.54
CCBE1-203ENST00000589116 DYRK1BQ9Y463 629 aa11.68□□□□□ -0.54
CCBE1-203ENST00000589116 GPR45Q9Y5Y3 372 aa11.68□□□□□ -0.54
CCBE1-203ENST00000589116 HEBP2Q9Y5Z4 205 aa11.68□□□□□ -0.54
CCBE1-203ENST00000589116 PLXND1Q9Y4D7 1925 aa11.68□□□□□ -0.54
CCBE1-203ENST00000589116 BBIP1A8MTZ0 92 aa11.68□□□□□ -0.54
CCBE1-203ENST00000589116 E7EQ34 232 aa11.68□□□□□ -0.54
CCBE1-203ENST00000589116 H0YIV9 168 aa11.68□□□□□ -0.54
CCBE1-203ENST00000589116 KDM1AO60341 852 aa11.68□□□□□ -0.54
CCBE1-203ENST00000589116 PRAMEF4O60810 478 aa11.68□□□□□ -0.54
CCBE1-203ENST00000589116 RASSF9O75901 435 aa11.68□□□□□ -0.54
CCBE1-203ENST00000589116 RSL1D1O76021 490 aaKnown RBP11.68□□□□□ -0.54
CCBE1-203ENST00000589116 HSD3B1P14060 373 aa11.68□□□□□ -0.54
CCBE1-203ENST00000589116 PRPH2P23942 346 aa11.68□□□□□ -0.54
CCBE1-203ENST00000589116 HSD3B2P26439 372 aa11.68□□□□□ -0.54
CCBE1-203ENST00000589116 RPL10P27635 214 aaKnown RBP11.68□□□□□ -0.54
CCBE1-203ENST00000589116 ELF3P78545 371 aaPredicted RBP11.68□□□□□ -0.54
CCBE1-203ENST00000589116 CSTF3Q12996 717 aaKnown RBP11.68□□□□□ -0.54
CCBE1-203ENST00000589116 CUL3Q13618 768 aa11.68□□□□□ -0.54
CCBE1-203ENST00000589116 CYP2A13Q16696 494 aa11.68□□□□□ -0.54
CCBE1-203ENST00000589116 PDCD4Q53EL6 469 aaKnown RBP11.68□□□□□ -0.54
CCBE1-203ENST00000589116 AGKQ53H12 422 aa11.68□□□□□ -0.54
CCBE1-203ENST00000589116 PRAMEF9Q5VWM5 478 aa11.68□□□□□ -0.54
CCBE1-203ENST00000589116 LCTLQ6UWM7 567 aa11.68□□□□□ -0.54
CCBE1-203ENST00000589116 GK5Q6ZS86 529 aa11.68□□□□□ -0.54
CCBE1-203ENST00000589116 PPFIBP2Q8ND30 876 aa11.68□□□□□ -0.54
CCBE1-203ENST00000589116 TSPEARQ8WU66 669 aa11.68□□□□□ -0.54
CCBE1-203ENST00000589116 INSM2Q96T92 566 aaPredicted RBP11.68□□□□□ -0.54
CCBE1-203ENST00000589116 HAUS8Q9BT25 410 aa11.68□□□□□ -0.54
CCBE1-203ENST00000589116 EFCAB11Q9BUY7 163 aa11.68□□□□□ -0.54
CCBE1-203ENST00000589116 PCBD2Q9H0N5 130 aa11.68□□□□□ -0.54
CCBE1-203ENST00000589116 GPR27Q9NS67 375 aa11.68□□□□□ -0.54
CCBE1-203ENST00000589116 TRNAU1APQ9NX07 287 aaKnown RBP11.68□□□□□ -0.54
CCBE1-203ENST00000589116 ASIC5Q9NY37 505 aa11.68□□□□□ -0.54
CCBE1-203ENST00000589116 NOP53Q9NZM5 478 aaKnown RBP11.68□□□□□ -0.54
CCBE1-203ENST00000589116 ZIM2Q9NZV7 527 aa11.68□□□□□ -0.54
CCBE1-203ENST00000589116 CCDC167Q9P0B6 97 aa11.68□□□□□ -0.54
CCBE1-203ENST00000589116 CIDEBQ9UHD4 219 aa11.68□□□□□ -0.54
CCBE1-203ENST00000589116 WDR37Q9Y2I8 494 aa11.68□□□□□ -0.54
CCBE1-203ENST00000589116 ZBTB32Q9Y2Y4 487 aaPredicted RBP11.68□□□□□ -0.54
CCBE1-203ENST00000589116 MYO15AQ9UKN7 3530 aa11.68□□□□□ -0.54
CCBE1-203ENST00000589116 EPG5Q9HCE0 2579 aa11.68□□□□□ -0.54
CCBE1-203ENST00000589116 A0A1W2PPC4 97 aa11.67□□□□□ -0.54
CCBE1-203ENST00000589116 PDZK1P1A8MUH7 402 aa11.67□□□□□ -0.54
CCBE1-203ENST00000589116 MEI4A8MW99 385 aa11.67□□□□□ -0.54
CCBE1-203ENST00000589116 PDYNP01213 254 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms