RNA–Protein interactions for RNA: ENST00000587888.5

ERCC1-205, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 5

Gene ERCC1, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-205ENST00000587888 HYKKA2RU49 373 aa13.54□□□□□ -0.24
ERCC1-205ENST00000587888 TARM1B6A8C7 271 aa13.54□□□□□ -0.24
ERCC1-205ENST00000587888 PRMT5O14744 637 aaPredicted RBP13.54□□□□□ -0.24
ERCC1-205ENST00000587888 LRRTM2O43300 516 aa13.54□□□□□ -0.24
ERCC1-205ENST00000587888 PRICKLE3O43900 615 aaPredicted RBP13.54□□□□□ -0.24
ERCC1-205ENST00000587888 C1orf105O95561 183 aa13.54□□□□□ -0.24
ERCC1-205ENST00000587888 APRTP07741 180 aa13.54□□□□□ -0.24
ERCC1-205ENST00000587888 BDKRB1P46663 353 aa13.54□□□□□ -0.24
ERCC1-205ENST00000587888 SESN2P58004 480 aaPredicted RBP13.54□□□□□ -0.24
ERCC1-205ENST00000587888 Q0VFX4 171 aa13.54□□□□□ -0.24
ERCC1-205ENST00000587888 ZNF169Q14929 603 aaPredicted RBP13.54□□□□□ -0.24
ERCC1-205ENST00000587888 OASLQ15646 514 aaKnown RBP13.54□□□□□ -0.24
ERCC1-205ENST00000587888 AARS2Q5JTZ9 985 aaKnown RBP13.54□□□□□ -0.24
ERCC1-205ENST00000587888 FRMPD2BQ6IN97 320 aa13.54□□□□□ -0.24
ERCC1-205ENST00000587888 OR4N4Q8N0Y3 316 aa13.54□□□□□ -0.24
ERCC1-205ENST00000587888 CATSPER1Q8NEC5 780 aa13.54□□□□□ -0.24
ERCC1-205ENST00000587888 OR11G2Q8NGC1 345 aa13.54□□□□□ -0.24
ERCC1-205ENST00000587888 GRHL3Q8TE85 626 aa13.54□□□□□ -0.24
ERCC1-205ENST00000587888 RAD51AP1Q96B01 352 aa13.54□□□□□ -0.24
ERCC1-205ENST00000587888 VPS50Q96JG6 964 aa13.54□□□□□ -0.24
ERCC1-205ENST00000587888 SLC26A1Q9H2B4 701 aa13.54□□□□□ -0.24
ERCC1-205ENST00000587888 EPS8L2Q9H6S3 715 aa13.54□□□□□ -0.24
ERCC1-205ENST00000587888 MRM3Q9HC36 420 aaKnown RBP13.54□□□□□ -0.24
ERCC1-205ENST00000587888 ZNF304Q9HCX3 659 aa13.54□□□□□ -0.24
ERCC1-205ENST00000587888 SEMA3GQ9NS98 782 aa13.54□□□□□ -0.24
ERCC1-205ENST00000587888 IL1RAPL1Q9NZN1 696 aa13.54□□□□□ -0.24
ERCC1-205ENST00000587888 NXT1Q9UKK6 140 aaKnown RBP13.54□□□□□ -0.24
ERCC1-205ENST00000587888 RUVBL2Q9Y230 463 aaKnown RBP13.54□□□□□ -0.24
ERCC1-205ENST00000587888 CACNA1DQ01668 2161 aa13.54□□□□□ -0.24
ERCC1-205ENST00000587888 FITM1A5D6W6 292 aa13.53□□□□□ -0.24
ERCC1-205ENST00000587888 NRP2O60462 931 aa13.53□□□□□ -0.24
ERCC1-205ENST00000587888 SRPX2O60687 465 aaPredicted RBP13.53□□□□□ -0.24
ERCC1-205ENST00000587888 NDUFS3O75489 264 aa13.53□□□□□ -0.24
ERCC1-205ENST00000587888 KLHL18O94889 574 aa13.53□□□□□ -0.24
ERCC1-205ENST00000587888 MED26O95402 600 aa13.53□□□□□ -0.24
ERCC1-205ENST00000587888 ZSCAN5DPP0CG00 497 aa13.53□□□□□ -0.24
ERCC1-205ENST00000587888 TTPAP49638 278 aa13.53□□□□□ -0.24
ERCC1-205ENST00000587888 CRADDP78560 199 aa13.53□□□□□ -0.24
ERCC1-205ENST00000587888 OCA2Q04671 838 aa13.53□□□□□ -0.24
ERCC1-205ENST00000587888 KLC1Q07866 573 aa13.53□□□□□ -0.24
ERCC1-205ENST00000587888 PCID2Q5JVF3 399 aa13.53□□□□□ -0.24
ERCC1-205ENST00000587888 SEL1L2Q5TEA6 688 aa13.53□□□□□ -0.24
ERCC1-205ENST00000587888 CNSTQ6PJW8 725 aa13.53□□□□□ -0.24
ERCC1-205ENST00000587888 IGFL2Q6UWQ7 119 aa13.53□□□□□ -0.24
ERCC1-205ENST00000587888 OTOAQ7RTW8 1153 aa13.53□□□□□ -0.24
ERCC1-205ENST00000587888 RAB42Q8N4Z0 105 aa13.53□□□□□ -0.24
ERCC1-205ENST00000587888 CCDC89Q8N998 374 aa13.53□□□□□ -0.24
ERCC1-205ENST00000587888 FAR1Q8WVX9 515 aa13.53□□□□□ -0.24
ERCC1-205ENST00000587888 MIEF2Q96C03 454 aa13.53□□□□□ -0.24
ERCC1-205ENST00000587888 PANX3Q96QZ0 392 aa13.53□□□□□ -0.24
ERCC1-205ENST00000587888 CRB3Q9BUF7 120 aa13.53□□□□□ -0.24
ERCC1-205ENST00000587888 YIPF2Q9BWQ6 316 aa13.53□□□□□ -0.24
ERCC1-205ENST00000587888 RAB11FIP5Q9BXF6 653 aa13.53□□□□□ -0.24
ERCC1-205ENST00000587888 P2RY12Q9H244 342 aa13.53□□□□□ -0.24
ERCC1-205ENST00000587888 ZNF160Q9HCG1 818 aa13.53□□□□□ -0.24
ERCC1-205ENST00000587888 GNPTGQ9UJJ9 305 aa13.53□□□□□ -0.24
ERCC1-205ENST00000587888 NUP210LQ5VU65 1888 aa13.53□□□□□ -0.24
ERCC1-205ENST00000587888 RP1L1Q8IWN7 2480 aaPredicted RBP13.52□□□□□ -0.24
ERCC1-205ENST00000587888 VSTM2BA6NLU5 285 aa13.52□□□□□ -0.25
ERCC1-205ENST00000587888 KPNA5O15131 536 aa13.52□□□□□ -0.25
ERCC1-205ENST00000587888 ZGLP1P0C6A0 271 aa13.52□□□□□ -0.25
ERCC1-205ENST00000587888 NMBRP28336 390 aa13.52□□□□□ -0.25
ERCC1-205ENST00000587888 RPL22P35268 128 aaKnown RBP13.52□□□□□ -0.25
ERCC1-205ENST00000587888 TSFMP43897 325 aaKnown RBP13.52□□□□□ -0.25
ERCC1-205ENST00000587888 EIF3BP55884 814 aaKnown RBP13.52□□□□□ -0.25
ERCC1-205ENST00000587888 YBX1P67809 324 aaKnown RBP13.52□□□□□ -0.25
ERCC1-205ENST00000587888 FASTKQ14296 549 aaKnown RBP13.52□□□□□ -0.25
ERCC1-205ENST00000587888 TLR1Q15399 786 aa13.52□□□□□ -0.25
ERCC1-205ENST00000587888 ISLR2Q6UXK2 745 aa13.52□□□□□ -0.25
ERCC1-205ENST00000587888 LAPTM4BQ86VI4 370 aa13.52□□□□□ -0.25
ERCC1-205ENST00000587888 SLC13A5Q86YT5 568 aaPredicted RBP13.52□□□□□ -0.25
ERCC1-205ENST00000587888 TXLNBQ8N3L3 684 aa13.52□□□□□ -0.25
ERCC1-205ENST00000587888 OTUD6BQ8N6M0 293 aa13.52□□□□□ -0.25
ERCC1-205ENST00000587888 OR2L3Q8NG85 312 aa13.52□□□□□ -0.25
ERCC1-205ENST00000587888 OR1N1Q8NGS0 311 aa13.52□□□□□ -0.25
ERCC1-205ENST00000587888 STT3BQ8TCJ2 826 aa13.52□□□□□ -0.25
ERCC1-205ENST00000587888 C8orf44Q96CB5 159 aa13.52□□□□□ -0.25
ERCC1-205ENST00000587888 FOPNLQ96NB1 174 aa13.52□□□□□ -0.25
ERCC1-205ENST00000587888 ZNF285Q96NJ3 590 aa13.52□□□□□ -0.25
ERCC1-205ENST00000587888 ACAT2Q9BWD1 397 aa13.52□□□□□ -0.25
ERCC1-205ENST00000587888 RBSNQ9H1K0 784 aa13.52□□□□□ -0.25
ERCC1-205ENST00000587888 PAK5Q9P286 719 aa13.52□□□□□ -0.25
ERCC1-205ENST00000587888 ZNF282Q9UDV7 671 aaPredicted RBP13.52□□□□□ -0.25
ERCC1-205ENST00000587888 CAPN6Q9Y6Q1 641 aa13.52□□□□□ -0.25
ERCC1-205ENST00000587888 FAM169AQ9Y6X4 670 aa13.52□□□□□ -0.25
ERCC1-205ENST00000587888 SPTBN1Q01082 2364 aaKnown RBP13.51□□□□□ -0.25
ERCC1-205ENST00000587888 ENO4A6NNW6 628 aa13.51□□□□□ -0.25
ERCC1-205ENST00000587888 MAP2K7O14733 419 aa13.51□□□□□ -0.25
ERCC1-205ENST00000587888 FKBP9O95302 570 aa13.51□□□□□ -0.25
ERCC1-205ENST00000587888 HPP00738 406 aa13.51□□□□□ -0.25
ERCC1-205ENST00000587888 EDN3P14138 238 aa13.51□□□□□ -0.25
ERCC1-205ENST00000587888 ACPPP15309 386 aa13.51□□□□□ -0.25
ERCC1-205ENST00000587888 FMO4P31512 558 aa13.51□□□□□ -0.25
ERCC1-205ENST00000587888 CARSP49589 748 aaKnown RBP13.51□□□□□ -0.25
ERCC1-205ENST00000587888 TSTA3Q13630 321 aaPredicted RBP13.51□□□□□ -0.25
ERCC1-205ENST00000587888 VWA2Q5GFL6 755 aa13.51□□□□□ -0.25
ERCC1-205ENST00000587888 FAAH2Q6GMR7 532 aa13.51□□□□□ -0.25
ERCC1-205ENST00000587888 FBXO42Q6P3S6 717 aa13.51□□□□□ -0.25
ERCC1-205ENST00000587888 CES3Q6UWW8 571 aa13.51□□□□□ -0.25
ERCC1-205ENST00000587888 TMEM139Q8IV31 216 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms