RNA–Protein interactions for RNA: ENST00000587339.2

TRIM47-204, Transcript of tripartite motif containing 47, humanhuman

TSL 1 (best)

Gene TRIM47, Length 1,907 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-204ENST00000587339 PACS2Q86VP3 889 aa19.22■□□□□ 0.67
TRIM47-204ENST00000587339 LMNTD1Q8N9Z9 388 aa19.22■□□□□ 0.67
TRIM47-204ENST00000587339 WDR60Q8WVS4 1066 aa19.22■□□□□ 0.67
TRIM47-204ENST00000587339 TOE1Q96GM8 510 aaKnown RBP19.22■□□□□ 0.67
TRIM47-204ENST00000587339 SHDQ96IW2 340 aa19.22■□□□□ 0.67
TRIM47-204ENST00000587339 TEX37Q96LM6 180 aa19.22■□□□□ 0.67
TRIM47-204ENST00000587339 WDR92Q96MX6 357 aa19.22■□□□□ 0.67
TRIM47-204ENST00000587339 IL17FQ96PD4 163 aa19.22■□□□□ 0.67
TRIM47-204ENST00000587339 C6orf106Q9H6K1 298 aaPredicted RBP19.22■□□□□ 0.67
TRIM47-204ENST00000587339 C1orf109Q9NX04 203 aa19.22■□□□□ 0.67
TRIM47-204ENST00000587339 PRPF19Q9UMS4 504 aaKnown RBP19.22■□□□□ 0.67
TRIM47-204ENST00000587339 EIF3LQ9Y262 564 aaKnown RBP19.22■□□□□ 0.67
TRIM47-204ENST00000587339 DYRK1BQ9Y463 629 aa19.22■□□□□ 0.67
TRIM47-204ENST00000587339 POLR3HQ9Y535 204 aaPredicted RBP19.22■□□□□ 0.67
TRIM47-204ENST00000587339 MRASO14807 208 aa19.21■□□□□ 0.67
TRIM47-204ENST00000587339 ANGPT2O15123 496 aa19.21■□□□□ 0.67
TRIM47-204ENST00000587339 CFLARO15519 480 aa19.21■□□□□ 0.67
TRIM47-204ENST00000587339 PI15O43692 258 aa19.21■□□□□ 0.67
TRIM47-204ENST00000587339 CCND1P24385 295 aa19.21■□□□□ 0.67
TRIM47-204ENST00000587339 KCNK10P57789 538 aa19.21■□□□□ 0.67
TRIM47-204ENST00000587339 ZNF33BQ06732 778 aa19.21■□□□□ 0.67
TRIM47-204ENST00000587339 LRP8Q14114 963 aa19.21■□□□□ 0.67
TRIM47-204ENST00000587339 RCAN2Q14206 197 aa19.21■□□□□ 0.67
TRIM47-204ENST00000587339 ARHGAP19Q14CB8 494 aa19.21■□□□□ 0.67
TRIM47-204ENST00000587339 THEMIS2Q5TEJ8 643 aa19.21■□□□□ 0.67
TRIM47-204ENST00000587339 PGM2L1Q6PCE3 622 aa19.21■□□□□ 0.67
TRIM47-204ENST00000587339 CYP20A1Q6UW02 462 aa19.21■□□□□ 0.67
TRIM47-204ENST00000587339 BNC2Q6ZN30 1099 aaPredicted RBP19.21■□□□□ 0.67
TRIM47-204ENST00000587339 GCNT7Q6ZNI0 430 aa19.21■□□□□ 0.67
TRIM47-204ENST00000587339 TMPRSS11BQ86T26 416 aa19.21■□□□□ 0.67
TRIM47-204ENST00000587339 ADHFE1Q8IWW8 467 aa19.21■□□□□ 0.67
TRIM47-204ENST00000587339 PCYOX1LQ8NBM8 494 aa19.21■□□□□ 0.67
TRIM47-204ENST00000587339 PROKR1Q8TCW9 393 aa19.21■□□□□ 0.67
TRIM47-204ENST00000587339 PDXPQ96GD0 296 aa19.21■□□□□ 0.67
TRIM47-204ENST00000587339 SLC45A3Q96JT2 553 aa19.21■□□□□ 0.67
TRIM47-204ENST00000587339 HHIPQ96QV1 700 aa19.21■□□□□ 0.67
TRIM47-204ENST00000587339 OR2M4Q96R27 311 aa19.21■□□□□ 0.67
TRIM47-204ENST00000587339 INSM2Q96T92 566 aaPredicted RBP19.21■□□□□ 0.67
TRIM47-204ENST00000587339 EBF2Q9HAK2 575 aa19.21■□□□□ 0.67
TRIM47-204ENST00000587339 TMEM45AQ9NWC5 275 aa19.21■□□□□ 0.67
TRIM47-204ENST00000587339 NDUFAF1Q9Y375 327 aa19.21■□□□□ 0.67
TRIM47-204ENST00000587339 PRR19A6NJB7 356 aa19.21■□□□□ 0.67
TRIM47-204ENST00000587339 FAM170BA6NMN3 283 aa19.21■□□□□ 0.67
TRIM47-204ENST00000587339 H0YIV9 168 aa19.21■□□□□ 0.67
TRIM47-204ENST00000587339 SCAMP1O15126 338 aa19.21■□□□□ 0.67
TRIM47-204ENST00000587339 RSL1D1O76021 490 aaKnown RBP19.21■□□□□ 0.67
TRIM47-204ENST00000587339 PDE5AO76074 875 aa19.21■□□□□ 0.67
TRIM47-204ENST00000587339 APBB3O95704 486 aa19.21■□□□□ 0.67
TRIM47-204ENST00000587339 CAPN3P20807 821 aa19.21■□□□□ 0.67
TRIM47-204ENST00000587339 HNRNPH1P31943 449 aaKnown RBP19.21■□□□□ 0.67
TRIM47-204ENST00000587339 CASP2P42575 452 aa19.21■□□□□ 0.67
TRIM47-204ENST00000587339 THOP1P52888 689 aa19.21■□□□□ 0.67
TRIM47-204ENST00000587339 FZD5Q13467 585 aa19.21■□□□□ 0.67
TRIM47-204ENST00000587339 C1orf146Q5VVC0 180 aa19.21■□□□□ 0.67
TRIM47-204ENST00000587339 DUS1LQ6P1R4 473 aaKnown RBP19.21■□□□□ 0.67
TRIM47-204ENST00000587339 SLCO4C1Q6ZQN7 724 aa19.21■□□□□ 0.67
TRIM47-204ENST00000587339 NET1Q7Z628 596 aaPredicted RBP19.21■□□□□ 0.67
TRIM47-204ENST00000587339 ZFAND4Q86XD8 727 aa19.21■□□□□ 0.67
TRIM47-204ENST00000587339 FBXW8Q8N3Y1 598 aa19.21■□□□□ 0.67
TRIM47-204ENST00000587339 WDR20Q8TBZ3 569 aa19.21■□□□□ 0.67
TRIM47-204ENST00000587339 TSPEARQ8WU66 669 aa19.21■□□□□ 0.67
TRIM47-204ENST00000587339 OR1E3Q8WZA6 343 aa19.21■□□□□ 0.67
TRIM47-204ENST00000587339 FERD3LQ96RJ6 166 aa19.21■□□□□ 0.67
TRIM47-204ENST00000587339 SERPINI1Q99574 410 aa19.21■□□□□ 0.67
TRIM47-204ENST00000587339 IMP3Q9NV31 184 aaKnown RBP19.21■□□□□ 0.67
TRIM47-204ENST00000587339 PCDHGA11Q9Y5H2 935 aa19.21■□□□□ 0.67
TRIM47-204ENST00000587339 SERTM1A2A2V5 107 aa19.2■□□□□ 0.66
TRIM47-204ENST00000587339 PDZK1P1A8MUH7 402 aa19.2■□□□□ 0.66
TRIM47-204ENST00000587339 C10orf142B7Z368 130 aa19.2■□□□□ 0.66
TRIM47-204ENST00000587339 IGHV4-34P06331 123 aa19.2■□□□□ 0.66
TRIM47-204ENST00000587339 ERGP11308 486 aa19.2■□□□□ 0.66
TRIM47-204ENST00000587339 VARSP26640 1264 aaKnown RBP19.2■□□□□ 0.66
TRIM47-204ENST00000587339 OXTRP30559 389 aa19.2■□□□□ 0.66
TRIM47-204ENST00000587339 HSD17B2P37059 387 aa19.2■□□□□ 0.66
TRIM47-204ENST00000587339 POLR2JP52435 117 aaKnown RBP19.2■□□□□ 0.66
TRIM47-204ENST00000587339 MTTPP55157 894 aa19.2■□□□□ 0.66
TRIM47-204ENST00000587339 STARD6P59095 220 aa19.2■□□□□ 0.66
TRIM47-204ENST00000587339 YPEL5P62699 121 aa19.2■□□□□ 0.66
TRIM47-204ENST00000587339 E2F2Q14209 437 aa19.2■□□□□ 0.66
TRIM47-204ENST00000587339 TRMT5Q32P41 509 aaKnown RBP19.2■□□□□ 0.66
TRIM47-204ENST00000587339 CACHD1Q5VU97 1274 aa19.2■□□□□ 0.66
TRIM47-204ENST00000587339 KIAA0895LQ68EN5 471 aa19.2■□□□□ 0.66
TRIM47-204ENST00000587339 HPS6Q86YV9 775 aa19.2■□□□□ 0.66
TRIM47-204ENST00000587339 TMEM145Q8NBT3 493 aa19.2■□□□□ 0.66
TRIM47-204ENST00000587339 SETD7Q8WTS6 366 aaKnown RBP19.2■□□□□ 0.66
TRIM47-204ENST00000587339 SPDL1Q96EA4 605 aa19.2■□□□□ 0.66
TRIM47-204ENST00000587339 CDRT15Q96T59 188 aa19.2■□□□□ 0.66
TRIM47-204ENST00000587339 FOXQ1Q9C009 403 aa19.2■□□□□ 0.66
TRIM47-204ENST00000587339 HS3ST3A1Q9Y663 406 aa19.2■□□□□ 0.66
TRIM47-204ENST00000587339 PRAMEF26H0Y7S4 382 aa19.19■□□□□ 0.66
TRIM47-204ENST00000587339 PRPH2P23942 346 aa19.19■□□□□ 0.66
TRIM47-204ENST00000587339 CCR5P51681 352 aa19.19■□□□□ 0.66
TRIM47-204ENST00000587339 UAP1L1Q3KQV9 507 aa19.19■□□□□ 0.66
TRIM47-204ENST00000587339 PRAMEF14Q5SWL7 426 aa19.19■□□□□ 0.66
TRIM47-204ENST00000587339 CATSPEREQ5SY80 951 aa19.19■□□□□ 0.66
TRIM47-204ENST00000587339 TPRG1LQ5T0D9 272 aa19.19■□□□□ 0.66
TRIM47-204ENST00000587339 PRAMEF13Q5VWM6 474 aa19.19■□□□□ 0.66
TRIM47-204ENST00000587339 RD3Q7Z3Z2 195 aa19.19■□□□□ 0.66
TRIM47-204ENST00000587339 C2orf73Q8N5S3 287 aaPredicted RBP19.19■□□□□ 0.66
TRIM47-204ENST00000587339 EFCAB3Q8N7B9 438 aa19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms