RNA–Protein interactions for RNA: ENST00000585042.5

VAPA-209, Transcript of VAMP associated protein A, humanhuman

TSL 4

Gene VAPA, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-209ENST00000585042 DNAJB14Q8TBM8 379 aa14.37□□□□□ -0.11
VAPA-209ENST00000585042 SELENOSQ9BQE4 189 aa14.37□□□□□ -0.11
VAPA-209ENST00000585042 ZBTB20Q9HC78 741 aaPredicted RBP14.37□□□□□ -0.11
VAPA-209ENST00000585042 RAB6BQ9NRW1 208 aa14.37□□□□□ -0.11
VAPA-209ENST00000585042 GNPTGQ9UJJ9 305 aa14.37□□□□□ -0.11
VAPA-209ENST00000585042 KLHL20Q9Y2M5 609 aa14.37□□□□□ -0.11
VAPA-209ENST00000585042 HS3ST3B1Q9Y662 390 aa14.37□□□□□ -0.11
VAPA-209ENST00000585042 POLEQ07864 2286 aa14.37□□□□□ -0.11
VAPA-209ENST00000585042 A1L4Q6 167 aa14.36□□□□□ -0.11
VAPA-209ENST00000585042 IQCF5A8MTL0 148 aa14.36□□□□□ -0.11
VAPA-209ENST00000585042 C1orf105O95561 183 aa14.36□□□□□ -0.11
VAPA-209ENST00000585042 IFNB1P01574 187 aa14.36□□□□□ -0.11
VAPA-209ENST00000585042 APRTP07741 180 aa14.36□□□□□ -0.11
VAPA-209ENST00000585042 NPY2RP49146 381 aa14.36□□□□□ -0.11
VAPA-209ENST00000585042 SEMA3AQ14563 771 aa14.36□□□□□ -0.11
VAPA-209ENST00000585042 WASHC2DQ5SRD0 308 aa14.36□□□□□ -0.11
VAPA-209ENST00000585042 SEL1L2Q5TEA6 688 aa14.36□□□□□ -0.11
VAPA-209ENST00000585042 RPUSD3Q6P087 351 aaKnown RBP14.36□□□□□ -0.11
VAPA-209ENST00000585042 TMEM139Q8IV31 216 aa14.36□□□□□ -0.11
VAPA-209ENST00000585042 SLC34A3Q8N130 599 aa14.36□□□□□ -0.11
VAPA-209ENST00000585042 ATG4AQ8WYN0 398 aa14.36□□□□□ -0.11
VAPA-209ENST00000585042 FOPNLQ96NB1 174 aa14.36□□□□□ -0.11
VAPA-209ENST00000585042 TSGA10Q9BZW7 698 aa14.36□□□□□ -0.11
VAPA-209ENST00000585042 P2RY12Q9H244 342 aa14.36□□□□□ -0.11
VAPA-209ENST00000585042 EPS8L2Q9H6S3 715 aa14.36□□□□□ -0.11
VAPA-209ENST00000585042 GRPEL1Q9HAV7 217 aa14.36□□□□□ -0.11
VAPA-209ENST00000585042 ZNF304Q9HCX3 659 aa14.36□□□□□ -0.11
VAPA-209ENST00000585042 EIF2B3Q9NR50 452 aaKnown RBP14.36□□□□□ -0.11
VAPA-209ENST00000585042 CHRAC1Q9NRG0 131 aa14.36□□□□□ -0.11
VAPA-209ENST00000585042 NOVA2Q9UNW9 492 aaKnown RBP14.36□□□□□ -0.11
VAPA-209ENST00000585042 NTNG1Q9Y2I2 539 aa14.36□□□□□ -0.11
VAPA-209ENST00000585042 FAM169AQ9Y6X4 670 aa14.36□□□□□ -0.11
VAPA-209ENST00000585042 DOCK10Q96BY6 2186 aa14.36□□□□□ -0.11
VAPA-209ENST00000585042 HYKKA2RU49 373 aa14.35□□□□□ -0.11
VAPA-209ENST00000585042 PCDH17O14917 1159 aa14.35□□□□□ -0.11
VAPA-209ENST00000585042 PHF2O75151 1096 aa14.35□□□□□ -0.11
VAPA-209ENST00000585042 EDN3P14138 238 aa14.35□□□□□ -0.11
VAPA-209ENST00000585042 DCTP40126 519 aa14.35□□□□□ -0.11
VAPA-209ENST00000585042 PER3P56645 1201 aa14.35□□□□□ -0.11
VAPA-209ENST00000585042 OCA2Q04671 838 aa14.35□□□□□ -0.11
VAPA-209ENST00000585042 ZNF169Q14929 603 aaPredicted RBP14.35□□□□□ -0.11
VAPA-209ENST00000585042 TLR1Q15399 786 aa14.35□□□□□ -0.11
VAPA-209ENST00000585042 RBBP7Q16576 425 aa14.35□□□□□ -0.11
VAPA-209ENST00000585042 ARMC3Q5W041 872 aa14.35□□□□□ -0.11
VAPA-209ENST00000585042 ISLR2Q6UXK2 745 aa14.35□□□□□ -0.11
VAPA-209ENST00000585042 OTOAQ7RTW8 1153 aa14.35□□□□□ -0.11
VAPA-209ENST00000585042 SLC13A5Q86YT5 568 aaPredicted RBP14.35□□□□□ -0.11
VAPA-209ENST00000585042 KRT222Q8N1A0 295 aa14.35□□□□□ -0.11
VAPA-209ENST00000585042 C2orf73Q8N5S3 287 aaPredicted RBP14.35□□□□□ -0.11
VAPA-209ENST00000585042 CCDC89Q8N998 374 aa14.35□□□□□ -0.11
VAPA-209ENST00000585042 OR11G2Q8NGC1 345 aa14.35□□□□□ -0.11
VAPA-209ENST00000585042 OR2A1Q8NGT9 310 aa14.35□□□□□ -0.11
VAPA-209ENST00000585042 LKAAEAR1Q8TD35 194 aa14.35□□□□□ -0.11
VAPA-209ENST00000585042 FAR1Q8WVX9 515 aa14.35□□□□□ -0.11
VAPA-209ENST00000585042 IL17FQ96PD4 163 aa14.35□□□□□ -0.11
VAPA-209ENST00000585042 TCF12Q99081 682 aa14.35□□□□□ -0.11
VAPA-209ENST00000585042 IL22Q9GZX6 179 aa14.35□□□□□ -0.11
VAPA-209ENST00000585042 TREX1Q9NSU2 369 aa14.35□□□□□ -0.11
VAPA-209ENST00000585042 ZNF282Q9UDV7 671 aaPredicted RBP14.35□□□□□ -0.11
VAPA-209ENST00000585042 TTC7AQ9ULT0 858 aaPredicted RBP14.35□□□□□ -0.11
VAPA-209ENST00000585042 CDC14AQ9UNH5 594 aa14.35□□□□□ -0.11
VAPA-209ENST00000585042 DRG1Q9Y295 367 aaKnown RBP14.35□□□□□ -0.11
VAPA-209ENST00000585042 CELSR2Q9HCU4 2923 aa14.35□□□□□ -0.11
VAPA-209ENST00000585042 MYO9AB2RTY4 2548 aa14.34□□□□□ -0.11
VAPA-209ENST00000585042 IGLV3-12A0A075B6K2 115 aa14.34□□□□□ -0.11
VAPA-209ENST00000585042 ENO4A6NNW6 628 aa14.34□□□□□ -0.11
VAPA-209ENST00000585042 H3BMM5 538 aa14.34□□□□□ -0.11
VAPA-209ENST00000585042 MASP2O00187 686 aa14.34□□□□□ -0.11
VAPA-209ENST00000585042 PFDN6O15212 129 aa14.34□□□□□ -0.11
VAPA-209ENST00000585042 CTSVO60911 334 aa14.34□□□□□ -0.11
VAPA-209ENST00000585042 NDUFS3O75489 264 aa14.34□□□□□ -0.11
VAPA-209ENST00000585042 HPP00738 406 aa14.34□□□□□ -0.11
VAPA-209ENST00000585042 FDXRP22570 491 aa14.34□□□□□ -0.11
VAPA-209ENST00000585042 MCM3P25205 808 aa14.34□□□□□ -0.11
VAPA-209ENST00000585042 ATP5DP30049 168 aa14.34□□□□□ -0.11
VAPA-209ENST00000585042 ADARP55265 1226 aaKnown RBP14.34□□□□□ -0.11
VAPA-209ENST00000585042 FOXL2P58012 376 aa14.34□□□□□ -0.11
VAPA-209ENST00000585042 VSX2P58304 361 aaPredicted RBP14.34□□□□□ -0.11
VAPA-209ENST00000585042 CDK16Q00536 496 aa14.34□□□□□ -0.11
VAPA-209ENST00000585042 CCNG2Q16589 344 aa14.34□□□□□ -0.11
VAPA-209ENST00000585042 HIF1AQ16665 826 aa14.34□□□□□ -0.11
VAPA-209ENST00000585042 MUM1Q2TAK8 710 aa14.34□□□□□ -0.11
VAPA-209ENST00000585042 ATG9BQ674R7 924 aa14.34□□□□□ -0.11
VAPA-209ENST00000585042 DRICH1Q6PGQ1 229 aaPredicted RBP14.34□□□□□ -0.11
VAPA-209ENST00000585042 SDCCAG8Q86SQ7 713 aaPredicted RBP14.34□□□□□ -0.11
VAPA-209ENST00000585042 TMEM151BQ8IW70 566 aa14.34□□□□□ -0.11
VAPA-209ENST00000585042 PARP9Q8IXQ6 854 aa14.34□□□□□ -0.11
VAPA-209ENST00000585042 OR2L3Q8NG85 312 aa14.34□□□□□ -0.11
VAPA-209ENST00000585042 ZDHHC19Q8WVZ1 309 aaPredicted RBP14.34□□□□□ -0.11
VAPA-209ENST00000585042 MVB12AQ96EY5 273 aa14.34□□□□□ -0.11
VAPA-209ENST00000585042 THOC3Q96J01 351 aaKnown RBP14.34□□□□□ -0.11
VAPA-209ENST00000585042 BFARQ9NZS9 450 aa14.34□□□□□ -0.11
VAPA-209ENST00000585042 SPATA7Q9P0W8 599 aa14.34□□□□□ -0.11
VAPA-209ENST00000585042 MARCH4Q9P2E8 410 aaPredicted RBP14.34□□□□□ -0.11
VAPA-209ENST00000585042 CTSFQ9UBX1 484 aa14.34□□□□□ -0.11
VAPA-209ENST00000585042 CACNA1DQ01668 2161 aa14.34□□□□□ -0.11
VAPA-209ENST00000585042 CRYBG3Q68DQ2 2970 aa14.33□□□□□ -0.12
VAPA-209ENST00000585042 OR2A25A4D2G3 310 aa14.33□□□□□ -0.12
VAPA-209ENST00000585042 PRPF4O43172 522 aaKnown RBP eCLIP14.33□□□□□ -0.12
VAPA-209ENST00000585042 MATN4O95460 622 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms