RNA–Protein interactions for RNA: ENST00000584672.1

CSNK1D-224, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 401 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-224ENST00000584672 SMARCAL1Q9NZC9 954 aa13.45□□□□□ -0.26
CSNK1D-224ENST00000584672 IL1RAPL1Q9NZN1 696 aa13.45□□□□□ -0.26
CSNK1D-224ENST00000584672 IMPACTQ9P2X3 320 aa13.45□□□□□ -0.26
CSNK1D-224ENST00000584672 TRPC4Q9UBN4 977 aa13.45□□□□□ -0.26
CSNK1D-224ENST00000584672 ZC3H7BQ9UGR2 993 aaKnown RBP13.45□□□□□ -0.26
CSNK1D-224ENST00000584672 PRSS21Q9Y6M0 314 aa13.45□□□□□ -0.26
CSNK1D-224ENST00000584672 IGLV3-16A0A075B6K0 115 aa13.44□□□□□ -0.26
CSNK1D-224ENST00000584672 ADAM10O14672 748 aa13.44□□□□□ -0.26
CSNK1D-224ENST00000584672 TTI1O43156 1089 aa13.44□□□□□ -0.26
CSNK1D-224ENST00000584672 CTSVO60911 334 aa13.44□□□□□ -0.26
CSNK1D-224ENST00000584672 AP2A1O95782 977 aa13.44□□□□□ -0.26
CSNK1D-224ENST00000584672 ACRV1P26436 265 aa13.44□□□□□ -0.26
CSNK1D-224ENST00000584672 PCOLCEQ15113 449 aa13.44□□□□□ -0.26
CSNK1D-224ENST00000584672 SF1Q15637 639 aaKnown RBP13.44□□□□□ -0.26
CSNK1D-224ENST00000584672 CEBPEQ15744 281 aa13.44□□□□□ -0.26
CSNK1D-224ENST00000584672 FAM214AQ32MH5 1076 aa13.44□□□□□ -0.26
CSNK1D-224ENST00000584672 ZC3H12BQ5HYM0 836 aaKnown RBP13.44□□□□□ -0.26
CSNK1D-224ENST00000584672 KAZNQ674X7 775 aa13.44□□□□□ -0.26
CSNK1D-224ENST00000584672 MFSD7Q6UXD7 560 aa13.44□□□□□ -0.26
CSNK1D-224ENST00000584672 RIPOR1Q6ZS17 1223 aa13.44□□□□□ -0.26
CSNK1D-224ENST00000584672 CEP128Q6ZU80 1094 aa13.44□□□□□ -0.26
CSNK1D-224ENST00000584672 BEST3Q8N1M1 668 aa13.44□□□□□ -0.26
CSNK1D-224ENST00000584672 TAB3Q8N5C8 712 aaPredicted RBP13.44□□□□□ -0.26
CSNK1D-224ENST00000584672 SIGLEC12Q96PQ1 595 aa13.44□□□□□ -0.26
CSNK1D-224ENST00000584672 DMRTA2Q96SC8 542 aa13.44□□□□□ -0.26
CSNK1D-224ENST00000584672 GORASP1Q9BQQ3 440 aa13.44□□□□□ -0.26
CSNK1D-224ENST00000584672 C10orf88Q9H8K7 445 aa13.44□□□□□ -0.26
CSNK1D-224ENST00000584672 ANO10Q9NW15 660 aa13.44□□□□□ -0.26
CSNK1D-224ENST00000584672 COQ3Q9NZJ6 369 aa13.44□□□□□ -0.26
CSNK1D-224ENST00000584672 LOC105369274A0A096LPK9 316 aa13.43□□□□□ -0.26
CSNK1D-224ENST00000584672 IGHV3-20A0A0C4DH32 117 aa13.43□□□□□ -0.26
CSNK1D-224ENST00000584672 LOC102723532A0A0G2JNH3 316 aa13.43□□□□□ -0.26
CSNK1D-224ENST00000584672 A0A0J9YVX5 310 aa13.43□□□□□ -0.26
CSNK1D-224ENST00000584672 FAM221AA4D161 298 aa13.43□□□□□ -0.26
CSNK1D-224ENST00000584672 FITM1A5D6W6 292 aa13.43□□□□□ -0.26
CSNK1D-224ENST00000584672 C5orf60A6NFR6 353 aa13.43□□□□□ -0.26
CSNK1D-224ENST00000584672 BHMG1C9JSJ3 638 aaPredicted RBP13.43□□□□□ -0.26
CSNK1D-224ENST00000584672 LIN7AO14910 233 aaPredicted RBP13.43□□□□□ -0.26
CSNK1D-224ENST00000584672 HEXBP07686 556 aa13.43□□□□□ -0.26
CSNK1D-224ENST00000584672 MYBL2P10244 700 aa13.43□□□□□ -0.26
CSNK1D-224ENST00000584672 ARHGAP25P42331 645 aa13.43□□□□□ -0.26
CSNK1D-224ENST00000584672 ZNF140P52738 457 aaPredicted RBP13.43□□□□□ -0.26
CSNK1D-224ENST00000584672 LTBQ06643 244 aa13.43□□□□□ -0.26
CSNK1D-224ENST00000584672 MYBPHQ13203 477 aa13.43□□□□□ -0.26
CSNK1D-224ENST00000584672 STX1AQ16623 288 aa13.43□□□□□ -0.26
CSNK1D-224ENST00000584672 DBN1Q16643 649 aa13.43□□□□□ -0.26
CSNK1D-224ENST00000584672 KRTCAP3Q53RY4 240 aa13.43□□□□□ -0.26
CSNK1D-224ENST00000584672 ODF2Q5BJF6 829 aa13.43□□□□□ -0.26
CSNK1D-224ENST00000584672 SASS6Q6UVJ0 657 aa13.43□□□□□ -0.26
CSNK1D-224ENST00000584672 TAOK1Q7L7X3 1001 aa13.43□□□□□ -0.26
CSNK1D-224ENST00000584672 OR4N4Q8N0Y3 316 aa13.43□□□□□ -0.26
CSNK1D-224ENST00000584672 CFAP61Q8NHU2 1237 aa13.43□□□□□ -0.26
CSNK1D-224ENST00000584672 PHF10Q8WUB8 498 aaKnown RBP13.43□□□□□ -0.26
CSNK1D-224ENST00000584672 DNAJC1Q96KC8 554 aaKnown RBP13.43□□□□□ -0.26
CSNK1D-224ENST00000584672 ZNF285Q96NJ3 590 aa13.43□□□□□ -0.26
CSNK1D-224ENST00000584672 FOXC2Q99958 501 aa13.43□□□□□ -0.26
CSNK1D-224ENST00000584672 UCK2Q9BZX2 261 aa13.43□□□□□ -0.26
CSNK1D-224ENST00000584672 LIME1Q9H400 295 aa13.43□□□□□ -0.26
CSNK1D-224ENST00000584672 INTS7Q9NVH2 962 aaKnown RBP13.43□□□□□ -0.26
CSNK1D-224ENST00000584672 ZNF487B1APH4 448 aa13.42□□□□□ -0.26
CSNK1D-224ENST00000584672 E9PLN8 166 aa13.42□□□□□ -0.26
CSNK1D-224ENST00000584672 ASNA1O43681 348 aa13.42□□□□□ -0.26
CSNK1D-224ENST00000584672 SEC24DO94855 1032 aaPredicted RBP13.42□□□□□ -0.26
CSNK1D-224ENST00000584672 CRTAMO95727 393 aa13.42□□□□□ -0.26
CSNK1D-224ENST00000584672 MLYCDO95822 493 aa13.42□□□□□ -0.26
CSNK1D-224ENST00000584672 TSPAN12O95859 305 aa13.42□□□□□ -0.26
CSNK1D-224ENST00000584672 SERPING1P05155 500 aa13.42□□□□□ -0.26
CSNK1D-224ENST00000584672 IGFBP2P18065 325 aa13.42□□□□□ -0.26
CSNK1D-224ENST00000584672 PSMB5P28074 263 aa13.42□□□□□ -0.26
CSNK1D-224ENST00000584672 EEF1DP29692 281 aaKnown RBP13.42□□□□□ -0.26
CSNK1D-224ENST00000584672 EFNA3P52797 238 aa13.42□□□□□ -0.26
CSNK1D-224ENST00000584672 GEMP55040 296 aa13.42□□□□□ -0.26
CSNK1D-224ENST00000584672 CCDC50Q8IVM0 306 aa13.42□□□□□ -0.26
CSNK1D-224ENST00000584672 CHERPQ8IWX8 916 aaKnown RBP13.42□□□□□ -0.26
CSNK1D-224ENST00000584672 PIANPQ8IYJ0 282 aa13.42□□□□□ -0.26
CSNK1D-224ENST00000584672 CABS1Q96KC9 395 aa13.42□□□□□ -0.26
CSNK1D-224ENST00000584672 C10orf90Q96M02 699 aa13.42□□□□□ -0.26
CSNK1D-224ENST00000584672 FRMD6Q96NE9 622 aa13.42□□□□□ -0.26
CSNK1D-224ENST00000584672 NAP1L5Q96NT1 182 aaPredicted RBP13.42□□□□□ -0.26
CSNK1D-224ENST00000584672 SMR3AQ99954 134 aa13.42□□□□□ -0.26
CSNK1D-224ENST00000584672 VKORC1Q9BQB6 163 aa13.42□□□□□ -0.26
CSNK1D-224ENST00000584672 ZNF700Q9H0M5 742 aa13.42□□□□□ -0.26
CSNK1D-224ENST00000584672 CXXC4Q9H2H0 198 aa13.42□□□□□ -0.26
CSNK1D-224ENST00000584672 UVRAGQ9P2Y5 699 aa13.42□□□□□ -0.26
CSNK1D-224ENST00000584672 TEKT2Q9UIF3 430 aa13.42□□□□□ -0.26
CSNK1D-224ENST00000584672 HYOU1Q9Y4L1 999 aa13.42□□□□□ -0.26
CSNK1D-224ENST00000584672 FAM169AQ9Y6X4 670 aa13.42□□□□□ -0.26
CSNK1D-224ENST00000584672 SCN2AQ99250 2005 aa13.42□□□□□ -0.26
CSNK1D-224ENST00000584672 TRBV5-4A0A0C4DH59 114 aa13.41□□□□□ -0.26
CSNK1D-224ENST00000584672 SLC5A10A0PJK1 596 aa13.41□□□□□ -0.26
CSNK1D-224ENST00000584672 RCCD1A6NED2 376 aa13.41□□□□□ -0.26
CSNK1D-224ENST00000584672 PRRG2O14669 202 aa13.41□□□□□ -0.26
CSNK1D-224ENST00000584672 KDM1AO60341 852 aa13.41□□□□□ -0.26
CSNK1D-224ENST00000584672 CST8O60676 142 aa13.41□□□□□ -0.26
CSNK1D-224ENST00000584672 ZWINTO95229 277 aa13.41□□□□□ -0.26
CSNK1D-224ENST00000584672 ERVK-10P10266 1014 aa13.41□□□□□ -0.26
CSNK1D-224ENST00000584672 CD9P21926 228 aa13.41□□□□□ -0.26
CSNK1D-224ENST00000584672 TUBA3CQ13748 450 aa13.41□□□□□ -0.26
CSNK1D-224ENST00000584672 FASTKQ14296 549 aaKnown RBP13.41□□□□□ -0.26
CSNK1D-224ENST00000584672 SPARCL1Q14515 664 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms