RNA–Protein interactions for RNA: ENST00000583697.1

CDK5RAP3-229, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 852 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-229ENST00000583697 CISD2Q8N5K1 135 aaKnown RBP8.35□□□□□ -1.07
CDK5RAP3-229ENST00000583697 METTL27Q8N6F8 245 aaPredicted RBP8.35□□□□□ -1.07
CDK5RAP3-229ENST00000583697 ACTRT1Q8TDG2 376 aa8.35□□□□□ -1.07
CDK5RAP3-229ENST00000583697 PPP4R1Q8TF05 950 aa8.35□□□□□ -1.07
CDK5RAP3-229ENST00000583697 C1orf54Q8WWF1 131 aa8.35□□□□□ -1.07
CDK5RAP3-229ENST00000583697 MS4A14Q96JA4 679 aa8.35□□□□□ -1.07
CDK5RAP3-229ENST00000583697 C5orf34Q96MH7 638 aa8.35□□□□□ -1.07
CDK5RAP3-229ENST00000583697 SPSB2Q99619 263 aa8.35□□□□□ -1.07
CDK5RAP3-229ENST00000583697 MIPEPQ99797 713 aa8.35□□□□□ -1.07
CDK5RAP3-229ENST00000583697 CRB3Q9BUF7 120 aa8.35□□□□□ -1.07
CDK5RAP3-229ENST00000583697 MENTQ9BUN1 341 aa8.35□□□□□ -1.07
CDK5RAP3-229ENST00000583697 SOX17Q9H6I2 414 aaPredicted RBP8.35□□□□□ -1.07
CDK5RAP3-229ENST00000583697 SLC6A20Q9NP91 592 aa8.35□□□□□ -1.07
CDK5RAP3-229ENST00000583697 ASF1BQ9NVP2 202 aa8.35□□□□□ -1.07
CDK5RAP3-229ENST00000583697 SPATA7Q9P0W8 599 aa8.35□□□□□ -1.07
CDK5RAP3-229ENST00000583697 TSR3Q9UJK0 312 aaKnown RBP8.35□□□□□ -1.07
CDK5RAP3-229ENST00000583697 FBXL4Q9UKA2 621 aa8.35□□□□□ -1.07
CDK5RAP3-229ENST00000583697 TTC7AQ9ULT0 858 aaPredicted RBP8.35□□□□□ -1.07
CDK5RAP3-229ENST00000583697 RUVBL2Q9Y230 463 aaKnown RBP8.35□□□□□ -1.07
CDK5RAP3-229ENST00000583697 COPG1Q9Y678 874 aaKnown RBP8.35□□□□□ -1.07
CDK5RAP3-229ENST00000583697 DOPEY2Q9Y3R5 2298 aa8.34□□□□□ -1.07
CDK5RAP3-229ENST00000583697 HECTD1Q9ULT8 2610 aa8.34□□□□□ -1.07
CDK5RAP3-229ENST00000583697 GOLGA6L10A0A0M3HER8 536 aa8.34□□□□□ -1.07
CDK5RAP3-229ENST00000583697 ANKUB1A6NFN9 424 aa8.34□□□□□ -1.07
CDK5RAP3-229ENST00000583697 E5RI56 91 aa8.34□□□□□ -1.07
CDK5RAP3-229ENST00000583697 MASP2O00187 686 aa8.34□□□□□ -1.07
CDK5RAP3-229ENST00000583697 MAP2K7O14733 419 aa8.34□□□□□ -1.07
CDK5RAP3-229ENST00000583697 PRPF4O43172 522 aaKnown RBP eCLIP8.34□□□□□ -1.071e-5■■■■□ 19.3
CDK5RAP3-229ENST00000583697 ALOX12BO75342 701 aa8.34□□□□□ -1.07
CDK5RAP3-229ENST00000583697 VPS26AO75436 327 aa8.34□□□□□ -1.07
CDK5RAP3-229ENST00000583697 SNRNP200O75643 2136 aaKnown RBP8.34□□□□□ -1.07
CDK5RAP3-229ENST00000583697 SLCO2B1O94956 709 aa8.34□□□□□ -1.07
CDK5RAP3-229ENST00000583697 C1orf105O95561 183 aa8.34□□□□□ -1.07
CDK5RAP3-229ENST00000583697 RNF224P0DH78 156 aa8.34□□□□□ -1.07
CDK5RAP3-229ENST00000583697 ETS1P14921 441 aa8.34□□□□□ -1.07
CDK5RAP3-229ENST00000583697 PAMP19021 973 aa8.34□□□□□ -1.07
CDK5RAP3-229ENST00000583697 MCM3P25205 808 aa8.34□□□□□ -1.07
CDK5RAP3-229ENST00000583697 AOAHP28039 575 aa8.34□□□□□ -1.07
CDK5RAP3-229ENST00000583697 PSMB5P28074 263 aa8.34□□□□□ -1.07
CDK5RAP3-229ENST00000583697 CMPK1P30085 196 aa8.34□□□□□ -1.07
CDK5RAP3-229ENST00000583697 GRIA3P42263 894 aa8.34□□□□□ -1.07
CDK5RAP3-229ENST00000583697 CARSP49589 748 aaKnown RBP8.34□□□□□ -1.07
CDK5RAP3-229ENST00000583697 SOX8P57073 446 aa8.34□□□□□ -1.07
CDK5RAP3-229ENST00000583697 VSX2P58304 361 aaPredicted RBP8.34□□□□□ -1.07
CDK5RAP3-229ENST00000583697 CRADDP78560 199 aa8.34□□□□□ -1.07
CDK5RAP3-229ENST00000583697 GRB7Q14451 532 aa8.34□□□□□ -1.07
CDK5RAP3-229ENST00000583697 CCNG2Q16589 344 aa8.34□□□□□ -1.07
CDK5RAP3-229ENST00000583697 NKG7Q16617 165 aa8.34□□□□□ -1.07
CDK5RAP3-229ENST00000583697 PLEKHN1Q494U1 663 aaPredicted RBP8.34□□□□□ -1.07
CDK5RAP3-229ENST00000583697 AGAP7PQ5VUJ5 663 aa8.34□□□□□ -1.07
CDK5RAP3-229ENST00000583697 HIST2H2BCQ6DN03 193 aa8.34□□□□□ -1.07
CDK5RAP3-229ENST00000583697 FCRL6Q6DN72 434 aa8.34□□□□□ -1.07
CDK5RAP3-229ENST00000583697 MRNIPQ6NTE8 343 aa8.34□□□□□ -1.07
CDK5RAP3-229ENST00000583697 FIGLAQ6QHK4 219 aa8.34□□□□□ -1.07
CDK5RAP3-229ENST00000583697 C4orf22Q6V702 233 aa8.34□□□□□ -1.07
CDK5RAP3-229ENST00000583697 Q6ZS92 163 aa8.34□□□□□ -1.07
CDK5RAP3-229ENST00000583697 SHISA6Q6ZSJ9 500 aa8.34□□□□□ -1.07
CDK5RAP3-229ENST00000583697 COX15Q7KZN9 410 aa8.34□□□□□ -1.07
CDK5RAP3-229ENST00000583697 OVCH1Q7RTY7 1134 aa8.34□□□□□ -1.07
CDK5RAP3-229ENST00000583697 MAMDC2Q7Z304 686 aaPredicted RBP8.34□□□□□ -1.07
CDK5RAP3-229ENST00000583697 CREG2Q8IUH2 290 aa8.34□□□□□ -1.07
CDK5RAP3-229ENST00000583697 LMNTD1Q8N9Z9 388 aa8.34□□□□□ -1.07
CDK5RAP3-229ENST00000583697 MAGOHBQ96A72 148 aaKnown RBP8.34□□□□□ -1.07
CDK5RAP3-229ENST00000583697 C19orf60Q96EN9 201 aa8.34□□□□□ -1.07
CDK5RAP3-229ENST00000583697 CNDP1Q96KN2 507 aa8.34□□□□□ -1.07
CDK5RAP3-229ENST00000583697 AGAP4Q96P64 663 aa8.34□□□□□ -1.07
CDK5RAP3-229ENST00000583697 P2RY12Q9H244 342 aa8.34□□□□□ -1.07
CDK5RAP3-229ENST00000583697 SLC26A1Q9H2B4 701 aa8.34□□□□□ -1.07
CDK5RAP3-229ENST00000583697 CHRAC1Q9NRG0 131 aa8.34□□□□□ -1.07
CDK5RAP3-229ENST00000583697 SEMA3GQ9NS98 782 aa8.34□□□□□ -1.07
CDK5RAP3-229ENST00000583697 IL1RAPL1Q9NZN1 696 aa8.34□□□□□ -1.07
CDK5RAP3-229ENST00000583697 BFARQ9NZS9 450 aa8.34□□□□□ -1.07
CDK5RAP3-229ENST00000583697 MARCH4Q9P2E8 410 aaPredicted RBP8.34□□□□□ -1.07
CDK5RAP3-229ENST00000583697 CTSFQ9UBX1 484 aa8.34□□□□□ -1.07
CDK5RAP3-229ENST00000583697 NOVA2Q9UNW9 492 aaKnown RBP8.34□□□□□ -1.07
CDK5RAP3-229ENST00000583697 SLC5A6Q9Y289 635 aa8.34□□□□□ -1.07
CDK5RAP3-229ENST00000583697 PCDHGA10Q9Y5H3 936 aa8.34□□□□□ -1.07
CDK5RAP3-229ENST00000583697 HS3ST3B1Q9Y662 390 aa8.34□□□□□ -1.07
CDK5RAP3-229ENST00000583697 NFS1Q9Y697 457 aa8.34□□□□□ -1.07
CDK5RAP3-229ENST00000583697 SHANK1Q9Y566 2161 aa8.34□□□□□ -1.08
CDK5RAP3-229ENST00000583697 NBPF19A0A087WUL8 3843 aa8.33□□□□□ -1.08
CDK5RAP3-229ENST00000583697 A0A0J9YVX5 310 aa8.33□□□□□ -1.08
CDK5RAP3-229ENST00000583697 TARM1B6A8C7 271 aa8.33□□□□□ -1.08
CDK5RAP3-229ENST00000583697 H3BMM5 538 aa8.33□□□□□ -1.08
CDK5RAP3-229ENST00000583697 SOCS6O14544 535 aa8.33□□□□□ -1.08
CDK5RAP3-229ENST00000583697 SRPX2O60687 465 aaPredicted RBP8.33□□□□□ -1.08
CDK5RAP3-229ENST00000583697 EIF2S1P05198 315 aaKnown RBP8.33□□□□□ -1.08
CDK5RAP3-229ENST00000583697 ZSCAN5DPP0CG00 497 aa8.33□□□□□ -1.08
CDK5RAP3-229ENST00000583697 ACPPP15309 386 aa8.33□□□□□ -1.08
CDK5RAP3-229ENST00000583697 FBLP22087 321 aaKnown RBP8.33□□□□□ -1.08
CDK5RAP3-229ENST00000583697 RPS3P23396 243 aaKnown RBP eCLIP8.33□□□□□ -1.08
CDK5RAP3-229ENST00000583697 NMBRP28336 390 aa8.33□□□□□ -1.08
CDK5RAP3-229ENST00000583697 RPL22P35268 128 aaKnown RBP8.33□□□□□ -1.08
CDK5RAP3-229ENST00000583697 GCGRP47871 477 aa8.33□□□□□ -1.08
CDK5RAP3-229ENST00000583697 OR1D4P47884 311 aa8.33□□□□□ -1.08
CDK5RAP3-229ENST00000583697 OCA2Q04671 838 aa8.33□□□□□ -1.08
CDK5RAP3-229ENST00000583697 CKAP4Q07065 602 aaKnown RBP8.33□□□□□ -1.08
CDK5RAP3-229ENST00000583697 CDC16Q13042 620 aa8.33□□□□□ -1.08
CDK5RAP3-229ENST00000583697 TSTA3Q13630 321 aaPredicted RBP8.33□□□□□ -1.08
CDK5RAP3-229ENST00000583697 ZNF169Q14929 603 aaPredicted RBP8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms