RNA–Protein interactions for RNA: ENST00000581737.1

CSNK1D-220, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 631 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-220ENST00000581737 HSPA4LO95757 839 aa13.09□□□□□ -0.31
CSNK1D-220ENST00000581737 ATP5F1P24539 256 aaPredicted RBP13.09□□□□□ -0.31
CSNK1D-220ENST00000581737 ACADLP28330 430 aa13.09□□□□□ -0.31
CSNK1D-220ENST00000581737 SLC1A6P48664 564 aa13.09□□□□□ -0.31
CSNK1D-220ENST00000581737 RASSF2P50749 326 aa13.09□□□□□ -0.31
CSNK1D-220ENST00000581737 CDKN2DP55273 166 aa13.09□□□□□ -0.31
CSNK1D-220ENST00000581737 ABCE1P61221 599 aaKnown RBP13.09□□□□□ -0.31
CSNK1D-220ENST00000581737 CXADRP78310 365 aa13.09□□□□□ -0.31
CSNK1D-220ENST00000581737 GPR18Q14330 331 aa13.09□□□□□ -0.31
CSNK1D-220ENST00000581737 PLCL1Q15111 1095 aa13.09□□□□□ -0.31
CSNK1D-220ENST00000581737 PERM1Q5SV97 790 aa13.09□□□□□ -0.31
CSNK1D-220ENST00000581737 C16orf46Q6P387 395 aa13.09□□□□□ -0.31
CSNK1D-220ENST00000581737 KLHL35Q6PF15 583 aa13.09□□□□□ -0.31
CSNK1D-220ENST00000581737 GPR155Q7Z3F1 870 aa13.09□□□□□ -0.31
CSNK1D-220ENST00000581737 PIWIL4Q7Z3Z4 852 aaKnown RBP13.09□□□□□ -0.31
CSNK1D-220ENST00000581737 DCUN1D3Q8IWE4 304 aa13.09□□□□□ -0.31
CSNK1D-220ENST00000581737 HOMEZQ8IX15 550 aa13.09□□□□□ -0.31
CSNK1D-220ENST00000581737 SPACA3Q8IXA5 215 aa13.09□□□□□ -0.31
CSNK1D-220ENST00000581737 TBC1D21Q8IYX1 336 aa13.09□□□□□ -0.31
CSNK1D-220ENST00000581737 LSM14AQ8ND56 463 aaKnown RBP13.09□□□□□ -0.31
CSNK1D-220ENST00000581737 ACVR1CQ8NER5 493 aa13.09□□□□□ -0.31
CSNK1D-220ENST00000581737 GIMAP7Q8NHV1 300 aa13.09□□□□□ -0.31
CSNK1D-220ENST00000581737 MAGEC3Q8TD91 643 aa13.09□□□□□ -0.31
CSNK1D-220ENST00000581737 LRRC37BQ96QE4 947 aa13.09□□□□□ -0.31
CSNK1D-220ENST00000581737 FERD3LQ96RJ6 166 aa13.09□□□□□ -0.31
CSNK1D-220ENST00000581737 DPYSL5Q9BPU6 564 aa13.09□□□□□ -0.31
CSNK1D-220ENST00000581737 NRSN2Q9GZP1 204 aa13.09□□□□□ -0.31
CSNK1D-220ENST00000581737 KIR3DX1Q9H7L2 352 aa13.09□□□□□ -0.31
CSNK1D-220ENST00000581737 EML4Q9HC35 981 aaKnown RBP13.09□□□□□ -0.31
CSNK1D-220ENST00000581737 SLCO1B3Q9NPD5 702 aa13.09□□□□□ -0.31
CSNK1D-220ENST00000581737 TXLNGQ9NUQ3 528 aa13.09□□□□□ -0.31
CSNK1D-220ENST00000581737 MRGBPQ9NV56 204 aa13.09□□□□□ -0.31
CSNK1D-220ENST00000581737 XPR1Q9UBH6 696 aa13.09□□□□□ -0.31
CSNK1D-220ENST00000581737 CFAP20Q9Y6A4 193 aaKnown RBP13.09□□□□□ -0.31
CSNK1D-220ENST00000581737 SYCE1LA8MT33 242 aa13.08□□□□□ -0.32
CSNK1D-220ENST00000581737 J3QKU1 62 aa13.08□□□□□ -0.32
CSNK1D-220ENST00000581737 CATP04040 527 aaKnown RBP13.08□□□□□ -0.32
CSNK1D-220ENST00000581737 MPC1LP0DKB6 136 aa13.08□□□□□ -0.32
CSNK1D-220ENST00000581737 FGF3P11487 239 aaPredicted RBP13.08□□□□□ -0.32
CSNK1D-220ENST00000581737 ALDH4A1P30038 563 aa13.08□□□□□ -0.32
CSNK1D-220ENST00000581737 PPM1FP49593 454 aaPredicted RBP13.08□□□□□ -0.32
CSNK1D-220ENST00000581737 IL2P60568 153 aa13.08□□□□□ -0.32
CSNK1D-220ENST00000581737 IRF9Q00978 393 aa13.08□□□□□ -0.32
CSNK1D-220ENST00000581737 OCRLQ01968 901 aa13.08□□□□□ -0.32
CSNK1D-220ENST00000581737 SPIDRQ14159 915 aa13.08□□□□□ -0.32
CSNK1D-220ENST00000581737 CSHL1Q14406 222 aa13.08□□□□□ -0.32
CSNK1D-220ENST00000581737 TBCCQ15814 346 aa13.08□□□□□ -0.32
CSNK1D-220ENST00000581737 LACTB2Q53H82 288 aaPredicted RBP13.08□□□□□ -0.32
CSNK1D-220ENST00000581737 ACSBG2Q5FVE4 666 aa13.08□□□□□ -0.32
CSNK1D-220ENST00000581737 DUS1LQ6P1R4 473 aaKnown RBP13.08□□□□□ -0.32
CSNK1D-220ENST00000581737 FOXR1Q6PIV2 292 aa13.08□□□□□ -0.32
CSNK1D-220ENST00000581737 PIM3Q86V86 326 aa13.08□□□□□ -0.32
CSNK1D-220ENST00000581737 VRK3Q8IV63 474 aa13.08□□□□□ -0.32
CSNK1D-220ENST00000581737 C10orf107Q8IVU9 208 aa13.08□□□□□ -0.32
CSNK1D-220ENST00000581737 CPNE9Q8IYJ1 553 aa13.08□□□□□ -0.32
CSNK1D-220ENST00000581737 MYO1HQ8N1T3 1032 aa13.08□□□□□ -0.32
CSNK1D-220ENST00000581737 RAB42Q8N4Z0 105 aa13.08□□□□□ -0.32
CSNK1D-220ENST00000581737 Q8N9G6 341 aaPredicted RBP13.08□□□□□ -0.32
CSNK1D-220ENST00000581737 OR5K2Q8NHB8 316 aa13.08□□□□□ -0.32
CSNK1D-220ENST00000581737 PIWIL2Q8TC59 973 aaKnown RBP13.08□□□□□ -0.32
CSNK1D-220ENST00000581737 FGF11Q92914 225 aa13.08□□□□□ -0.32
CSNK1D-220ENST00000581737 AHCYL2Q96HN2 611 aaKnown RBP13.08□□□□□ -0.32
CSNK1D-220ENST00000581737 GFM1Q96RP9 751 aaKnown RBP13.08□□□□□ -0.32
CSNK1D-220ENST00000581737 HGH1Q9BTY7 390 aa13.08□□□□□ -0.32
CSNK1D-220ENST00000581737 TRMOQ9BU70 441 aa13.08□□□□□ -0.32
CSNK1D-220ENST00000581737 MECRQ9BV79 373 aa13.08□□□□□ -0.32
CSNK1D-220ENST00000581737 ZMYND15Q9H091 742 aa13.08□□□□□ -0.32
CSNK1D-220ENST00000581737 C12orf65Q9H3J6 166 aaKnown RBP13.08□□□□□ -0.32
CSNK1D-220ENST00000581737 LRRN3Q9H3W5 708 aa13.08□□□□□ -0.32
CSNK1D-220ENST00000581737 SYNDIG1Q9H7V2 258 aa13.08□□□□□ -0.32
CSNK1D-220ENST00000581737 OXSMQ9NWU1 459 aa13.08□□□□□ -0.32
CSNK1D-220ENST00000581737 GALPQ9UBC7 116 aa13.08□□□□□ -0.32
CSNK1D-220ENST00000581737 RRP15Q9Y3B9 282 aaKnown RBP13.08□□□□□ -0.32
CSNK1D-220ENST00000581737 PTPRQQ9UMZ3 2332 aa13.08□□□□□ -0.32
CSNK1D-220ENST00000581737 IGHV1OR21-1A0A087WYE8 117 aa13.07□□□□□ -0.32
CSNK1D-220ENST00000581737 A0A0G2JND7 137 aa13.07□□□□□ -0.32
CSNK1D-220ENST00000581737 TEX51A0A1B0GUA7 166 aa13.07□□□□□ -0.32
CSNK1D-220ENST00000581737 NPHS1O60500 1241 aa13.07□□□□□ -0.32
CSNK1D-220ENST00000581737 CCDC22O60826 627 aa13.07□□□□□ -0.32
CSNK1D-220ENST00000581737 MATN4O95460 622 aa13.07□□□□□ -0.32
CSNK1D-220ENST00000581737 RPLP0P05388 317 aaKnown RBP13.07□□□□□ -0.32
CSNK1D-220ENST00000581737 CCDC166P0CW27 439 aa13.07□□□□□ -0.32
CSNK1D-220ENST00000581737 OR1D5P58170 312 aa13.07□□□□□ -0.32
CSNK1D-220ENST00000581737 DNAJB13P59910 316 aa13.07□□□□□ -0.32
CSNK1D-220ENST00000581737 INSM1Q01101 510 aaPredicted RBP13.07□□□□□ -0.32
CSNK1D-220ENST00000581737 ABRQ12979 859 aa13.07□□□□□ -0.32
CSNK1D-220ENST00000581737 PRKAA1Q13131 559 aa13.07□□□□□ -0.32
CSNK1D-220ENST00000581737 PAQR3Q6TCH7 311 aa13.07□□□□□ -0.32
CSNK1D-220ENST00000581737 CENPLQ8N0S6 344 aaPredicted RBP13.07□□□□□ -0.32
CSNK1D-220ENST00000581737 CFAP61Q8NHU2 1237 aa13.07□□□□□ -0.32
CSNK1D-220ENST00000581737 RHEBL1Q8TAI7 183 aa13.07□□□□□ -0.32
CSNK1D-220ENST00000581737 C10orf82Q8WW14 230 aa13.07□□□□□ -0.32
CSNK1D-220ENST00000581737 CCT6BQ92526 530 aa13.07□□□□□ -0.32
CSNK1D-220ENST00000581737 LINGO1Q96FE5 620 aa13.07□□□□□ -0.32
CSNK1D-220ENST00000581737 NAF1Q96HR8 494 aaKnown RBP13.07□□□□□ -0.32
CSNK1D-220ENST00000581737 FAR2Q96K12 515 aa13.07□□□□□ -0.32
CSNK1D-220ENST00000581737 SLC30A3Q99726 388 aa13.07□□□□□ -0.32
CSNK1D-220ENST00000581737 OLFM1Q99784 485 aa13.07□□□□□ -0.32
CSNK1D-220ENST00000581737 RAB11FIP5Q9BXF6 653 aa13.07□□□□□ -0.32
CSNK1D-220ENST00000581737 TFB2MQ9H5Q4 396 aaKnown RBP13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms