RNA–Protein interactions for RNA: ENST00000579061.5

SS18-212, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 3

Gene SS18, Length 646 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-212ENST00000579061 CD63P08962 238 aa14.26□□□□□ -0.13
SS18-212ENST00000579061 GABRB3P28472 473 aa14.26□□□□□ -0.13
SS18-212ENST00000579061 GRIA3P42263 894 aa14.26□□□□□ -0.13
SS18-212ENST00000579061 GCGRP47871 477 aa14.26□□□□□ -0.13
SS18-212ENST00000579061 CARSP49589 748 aaKnown RBP14.26□□□□□ -0.13
SS18-212ENST00000579061 KCNAB2Q13303 367 aa14.26□□□□□ -0.13
SS18-212ENST00000579061 CUL1Q13616 776 aa14.26□□□□□ -0.13
SS18-212ENST00000579061 TCTE1Q5JU00 501 aa14.26□□□□□ -0.13
SS18-212ENST00000579061 ATP1A1-AS1Q5TC04 95 aa14.26□□□□□ -0.13
SS18-212ENST00000579061 YOD1Q5VVQ6 348 aaPredicted RBP14.26□□□□□ -0.13
SS18-212ENST00000579061 FCRL6Q6DN72 434 aa14.26□□□□□ -0.13
SS18-212ENST00000579061 MCATQ8IVS2 390 aaKnown RBP14.26□□□□□ -0.13
SS18-212ENST00000579061 OR2L3Q8NG85 312 aa14.26□□□□□ -0.13
SS18-212ENST00000579061 THAP4Q8WY91 577 aa14.26□□□□□ -0.13
SS18-212ENST00000579061 DLG3Q92796 817 aa14.26□□□□□ -0.13
SS18-212ENST00000579061 PWWP2AQ96N64 755 aa14.26□□□□□ -0.13
SS18-212ENST00000579061 ZNF285Q96NJ3 590 aa14.26□□□□□ -0.13
SS18-212ENST00000579061 RUFY1Q96T51 708 aa14.26□□□□□ -0.13
SS18-212ENST00000579061 ERP44Q9BS26 406 aa14.26□□□□□ -0.13
SS18-212ENST00000579061 TRIM31Q9BZY9 425 aa14.26□□□□□ -0.13
SS18-212ENST00000579061 SLC25A18Q9H1K4 315 aa14.26□□□□□ -0.13
SS18-212ENST00000579061 ANKMY1Q9P2S6 941 aa14.26□□□□□ -0.13
SS18-212ENST00000579061 TRMT6Q9UJA5 497 aaKnown RBP14.26□□□□□ -0.13
SS18-212ENST00000579061 TSR3Q9UJK0 312 aaKnown RBP14.26□□□□□ -0.13
SS18-212ENST00000579061 KCNMB2Q9Y691 235 aa14.26□□□□□ -0.13
SS18-212ENST00000579061 BSNQ9UPA5 3926 aa14.25□□□□□ -0.13
SS18-212ENST00000579061 CDC14CA4D256 554 aa14.25□□□□□ -0.13
SS18-212ENST00000579061 KRT87PA6NCN2 255 aa14.25□□□□□ -0.13
SS18-212ENST00000579061 C9J4A7 227 aa14.25□□□□□ -0.13
SS18-212ENST00000579061 SRPX2O60687 465 aaPredicted RBP14.25□□□□□ -0.13
SS18-212ENST00000579061 FURINP09958 794 aa14.25□□□□□ -0.13
SS18-212ENST00000579061 PSMB5P28074 263 aa14.25□□□□□ -0.13
SS18-212ENST00000579061 CMPK1P30085 196 aa14.25□□□□□ -0.13
SS18-212ENST00000579061 RGS4P49798 205 aa14.25□□□□□ -0.13
SS18-212ENST00000579061 PNLIPRP1P54315 467 aa14.25□□□□□ -0.13
SS18-212ENST00000579061 ARSFP54793 590 aa14.25□□□□□ -0.13
SS18-212ENST00000579061 TIAL1Q01085 375 aaKnown RBP eCLIP14.25□□□□□ -0.13
SS18-212ENST00000579061 FASTKQ14296 549 aaKnown RBP14.25□□□□□ -0.13
SS18-212ENST00000579061 PTCHD3Q3KNS1 767 aa14.25□□□□□ -0.13
SS18-212ENST00000579061 LCN10Q6JVE6 187 aa14.25□□□□□ -0.13
SS18-212ENST00000579061 SYT10Q6XYQ8 523 aa14.25□□□□□ -0.13
SS18-212ENST00000579061 ZNF605Q86T29 641 aa14.25□□□□□ -0.13
SS18-212ENST00000579061 APLFQ8IW19 511 aaPredicted RBP14.25□□□□□ -0.13
SS18-212ENST00000579061 CPNE9Q8IYJ1 553 aa14.25□□□□□ -0.13
SS18-212ENST00000579061 ENDOVQ8N8Q3 282 aaKnown RBP14.25□□□□□ -0.13
SS18-212ENST00000579061 CFAP36Q96G28 342 aa14.25□□□□□ -0.13
SS18-212ENST00000579061 GBP5Q96PP8 586 aa14.25□□□□□ -0.13
SS18-212ENST00000579061 PKP4Q99569 1192 aa14.25□□□□□ -0.13
SS18-212ENST00000579061 MIPEPQ99797 713 aa14.25□□□□□ -0.13
SS18-212ENST00000579061 WDR83Q9BRX9 315 aaKnown RBP14.25□□□□□ -0.13
SS18-212ENST00000579061 TXLNGQ9NUQ3 528 aa14.25□□□□□ -0.13
SS18-212ENST00000579061 WHRNQ9P202 907 aa14.25□□□□□ -0.13
SS18-212ENST00000579061 TCFL5Q9UL49 500 aa14.25□□□□□ -0.13
SS18-212ENST00000579061 PADI2Q9Y2J8 665 aa14.25□□□□□ -0.13
SS18-212ENST00000579061 KLHL20Q9Y2M5 609 aa14.25□□□□□ -0.13
SS18-212ENST00000579061 SNX24Q9Y343 169 aa14.25□□□□□ -0.13
SS18-212ENST00000579061 ZNF462Q96JM2 2506 aa14.25□□□□□ -0.13
SS18-212ENST00000579061 MED13Q9UHV7 2174 aa14.24□□□□□ -0.13
SS18-212ENST00000579061 E7ENX8 843 aa14.24□□□□□ -0.13
SS18-212ENST00000579061 EIF3HO15372 352 aaKnown RBP eCLIP14.24□□□□□ -0.13
SS18-212ENST00000579061 SLC16A8O95907 504 aa14.24□□□□□ -0.13
SS18-212ENST00000579061 C8GP07360 202 aa14.24□□□□□ -0.13
SS18-212ENST00000579061 MCM3P25205 808 aa14.24□□□□□ -0.13
SS18-212ENST00000579061 RPA3P35244 121 aaPredicted RBP14.24□□□□□ -0.13
SS18-212ENST00000579061 RPS18P62269 152 aaKnown RBP14.24□□□□□ -0.13
SS18-212ENST00000579061 DCDP81605 110 aaKnown RBP14.24□□□□□ -0.13
SS18-212ENST00000579061 TAP2Q03519 686 aa14.24□□□□□ -0.13
SS18-212ENST00000579061 ILF2Q12905 390 aaKnown RBP14.24□□□□□ -0.13
SS18-212ENST00000579061 PDIA2Q13087 525 aaKnown RBP14.24□□□□□ -0.13
SS18-212ENST00000579061 CALCOCO2Q13137 446 aa14.24□□□□□ -0.13
SS18-212ENST00000579061 SP140Q13342 867 aa14.24□□□□□ -0.13
SS18-212ENST00000579061 NCF4Q15080 339 aa14.24□□□□□ -0.13
SS18-212ENST00000579061 HP1BP3Q5SSJ5 553 aaPredicted RBP14.24□□□□□ -0.13
SS18-212ENST00000579061 RBM20Q5T481 1227 aaKnown RBP14.24□□□□□ -0.13
SS18-212ENST00000579061 TRMT10BQ6PF06 316 aaKnown RBP14.24□□□□□ -0.13
SS18-212ENST00000579061 ZNF572Q7Z3I7 529 aaPredicted RBP14.24□□□□□ -0.13
SS18-212ENST00000579061 C17orf53Q8N3J3 647 aaPredicted RBP14.24□□□□□ -0.13
SS18-212ENST00000579061 ZNF655Q8N720 491 aaPredicted RBP14.24□□□□□ -0.13
SS18-212ENST00000579061 ADAMTS17Q8TE56 1095 aa14.24□□□□□ -0.13
SS18-212ENST00000579061 ZNF480Q8WV37 535 aa14.24□□□□□ -0.13
SS18-212ENST00000579061 NDNQ99608 321 aa14.24□□□□□ -0.13
SS18-212ENST00000579061 NDC1Q9BTX1 674 aa14.24□□□□□ -0.13
SS18-212ENST00000579061 PPANQ9NQ55 473 aaKnown RBP14.24□□□□□ -0.13
SS18-212ENST00000579061 IRAK4Q9NWZ3 460 aa14.24□□□□□ -0.13
SS18-212ENST00000579061 MOCS1Q9NZB8 636 aa14.24□□□□□ -0.13
SS18-212ENST00000579061 SNX7Q9UNH6 387 aa14.24□□□□□ -0.13
SS18-212ENST00000579061 MAN2B2Q9Y2E5 1009 aa14.24□□□□□ -0.13
SS18-212ENST00000579061 OR2A25A4D2G3 310 aa14.23□□□□□ -0.13
SS18-212ENST00000579061 FITM1A5D6W6 292 aa14.23□□□□□ -0.13
SS18-212ENST00000579061 SLC16A5O15375 505 aa14.23□□□□□ -0.13
SS18-212ENST00000579061 RAD51CO43502 376 aa14.23□□□□□ -0.13
SS18-212ENST00000579061 CTSVO60911 334 aa14.23□□□□□ -0.13
SS18-212ENST00000579061 CCNDBP1O95273 360 aa14.23□□□□□ -0.13
SS18-212ENST00000579061 ONECUT2O95948 504 aa14.23□□□□□ -0.13
SS18-212ENST00000579061 CTSBP07858 339 aa14.23□□□□□ -0.13
SS18-212ENST00000579061 PMS2P54278 862 aa14.23□□□□□ -0.13
SS18-212ENST00000579061 ABATP80404 500 aa14.23□□□□□ -0.13
SS18-212ENST00000579061 RELAQ04206 551 aa14.23□□□□□ -0.13
SS18-212ENST00000579061 PRDX1Q06830 199 aaKnown RBP14.23□□□□□ -0.13
SS18-212ENST00000579061 MGAT5Q09328 741 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms