RNA–Protein interactions for RNA: ENST00000578861.5

SNX11-205, Transcript of sorting nexin 11, humanhuman

TSL 4

Gene SNX11, Length 571 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-205ENST00000578861 F12P00748 615 aaPredicted RBP8.47□□□□□ -1.05
SNX11-205ENST00000578861 MSL3P1P0C860 447 aa8.47□□□□□ -1.05
SNX11-205ENST00000578861 UGT2B7P16662 529 aa8.47□□□□□ -1.05
SNX11-205ENST00000578861 TPH1P17752 444 aa8.47□□□□□ -1.05
SNX11-205ENST00000578861 EIF3EP60228 445 aaKnown RBP8.47□□□□□ -1.05
SNX11-205ENST00000578861 BOP1Q14137 746 aaKnown RBP8.47□□□□□ -1.05
SNX11-205ENST00000578861 KEAP1Q14145 624 aa8.47□□□□□ -1.05
SNX11-205ENST00000578861 TCEAL1Q15170 157 aa8.47□□□□□ -1.05
SNX11-205ENST00000578861 ZIC1Q15915 447 aa8.47□□□□□ -1.05
SNX11-205ENST00000578861 DEFB113Q30KQ7 82 aa8.47□□□□□ -1.05
SNX11-205ENST00000578861 ZNF658BQ4V348 819 aaPredicted RBP8.47□□□□□ -1.05
SNX11-205ENST00000578861 ZNF385CQ66K41 422 aaPredicted RBP8.47□□□□□ -1.05
SNX11-205ENST00000578861 DENND5AQ6IQ26 1287 aa8.47□□□□□ -1.05
SNX11-205ENST00000578861 UNC5AQ6ZN44 842 aa8.47□□□□□ -1.05
SNX11-205ENST00000578861 PPP1R32Q7Z5V6 425 aa8.47□□□□□ -1.05
SNX11-205ENST00000578861 SPPL2CQ8IUH8 684 aa8.47□□□□□ -1.05
SNX11-205ENST00000578861 CDKL3Q8IVW4 592 aaPredicted RBP8.47□□□□□ -1.05
SNX11-205ENST00000578861 VSTM4Q8IW00 320 aa8.47□□□□□ -1.05
SNX11-205ENST00000578861 CIARTQ8N365 385 aaPredicted RBP8.47□□□□□ -1.05
SNX11-205ENST00000578861 ZNF655Q8N720 491 aaPredicted RBP8.47□□□□□ -1.05
SNX11-205ENST00000578861 C19orf47Q8N9M1 422 aaKnown RBP8.47□□□□□ -1.05
SNX11-205ENST00000578861 ACTL9Q8TC94 416 aa8.47□□□□□ -1.05
SNX11-205ENST00000578861 HEXDCQ8WVB3 486 aa8.47□□□□□ -1.05
SNX11-205ENST00000578861 THOC3Q96J01 351 aaKnown RBP8.47□□□□□ -1.05
SNX11-205ENST00000578861 TBL1YQ9BQ87 522 aa8.47□□□□□ -1.05
SNX11-205ENST00000578861 FERMT1Q9BQL6 677 aa8.47□□□□□ -1.05
SNX11-205ENST00000578861 GPATCH1Q9BRR8 931 aaKnown RBP8.47□□□□□ -1.05
SNX11-205ENST00000578861 RNF32Q9H0A6 362 aa8.47□□□□□ -1.05
SNX11-205ENST00000578861 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.47□□□□□ -1.05
SNX11-205ENST00000578861 VPS37BQ9H9H4 285 aa8.47□□□□□ -1.05
SNX11-205ENST00000578861 TXLNGQ9NUQ3 528 aa8.47□□□□□ -1.05
SNX11-205ENST00000578861 SPHK1Q9NYA1 384 aa8.47□□□□□ -1.05
SNX11-205ENST00000578861 SMARCAL1Q9NZC9 954 aa8.47□□□□□ -1.05
SNX11-205ENST00000578861 ABI3Q9P2A4 366 aa8.47□□□□□ -1.05
SNX11-205ENST00000578861 DHCR7Q9UBM7 475 aaKnown RBP8.47□□□□□ -1.05
SNX11-205ENST00000578861 PLAGL1Q9UM63 463 aa8.47□□□□□ -1.05
SNX11-205ENST00000578861 SBDSQ9Y3A5 250 aaKnown RBP eCLIP8.47□□□□□ -1.05
SNX11-205ENST00000578861 TRAV17A0A0B4J275 112 aa8.46□□□□□ -1.06
SNX11-205ENST00000578861 ISM1B1AKI9 464 aa8.46□□□□□ -1.06
SNX11-205ENST00000578861 APOC4-APOC2K7ER74 178 aa8.46□□□□□ -1.06
SNX11-205ENST00000578861 AGPSO00116 658 aa8.46□□□□□ -1.06
SNX11-205ENST00000578861 SOCS6O14544 535 aa8.46□□□□□ -1.06
SNX11-205ENST00000578861 ZSCAN9O15535 394 aaPredicted RBP8.46□□□□□ -1.06
SNX11-205ENST00000578861 ZNHIT1O43257 154 aa8.46□□□□□ -1.06
SNX11-205ENST00000578861 CNOT3O75175 753 aaKnown RBP8.46□□□□□ -1.06
SNX11-205ENST00000578861 KLHL18O94889 574 aa8.46□□□□□ -1.06
SNX11-205ENST00000578861 APOC2P02655 101 aa8.46□□□□□ -1.06
SNX11-205ENST00000578861 UQCRHP07919 91 aa8.46□□□□□ -1.06
SNX11-205ENST00000578861 CHRM5P08912 532 aaPredicted RBP8.46□□□□□ -1.06
SNX11-205ENST00000578861 RBP3P10745 1247 aa8.46□□□□□ -1.06
SNX11-205ENST00000578861 IGFBP2P18065 325 aa8.46□□□□□ -1.06
SNX11-205ENST00000578861 ALAS2P22557 587 aa8.46□□□□□ -1.06
SNX11-205ENST00000578861 CTNNA2P26232 953 aa8.46□□□□□ -1.06
SNX11-205ENST00000578861 ACRV1P26436 265 aa8.46□□□□□ -1.06
SNX11-205ENST00000578861 HOXC12P31275 282 aa8.46□□□□□ -1.06
SNX11-205ENST00000578861 SHMT2P34897 504 aa8.46□□□□□ -1.06
SNX11-205ENST00000578861 CD151P48509 253 aa8.46□□□□□ -1.06
SNX11-205ENST00000578861 CSE1LP55060 971 aaKnown RBP8.46□□□□□ -1.06
SNX11-205ENST00000578861 DCDP81605 110 aaKnown RBP8.46□□□□□ -1.06
SNX11-205ENST00000578861 CBLBQ13191 982 aa8.46□□□□□ -1.06
SNX11-205ENST00000578861 MSLNQ13421 630 aaPredicted RBP8.46□□□□□ -1.06
SNX11-205ENST00000578861 POU6F1Q14863 301 aa8.46□□□□□ -1.06
SNX11-205ENST00000578861 DBN1Q16643 649 aa8.46□□□□□ -1.06
SNX11-205ENST00000578861 GPR33Q49SQ1 333 aa8.46□□□□□ -1.06
SNX11-205ENST00000578861 NKAIN1Q4KMZ8 207 aa8.46□□□□□ -1.06
SNX11-205ENST00000578861 CEP128Q6ZU80 1094 aa8.46□□□□□ -1.06
SNX11-205ENST00000578861 FAM20CQ8IXL6 584 aa8.46□□□□□ -1.06
SNX11-205ENST00000578861 ZZZ3Q8IYH5 903 aa8.46□□□□□ -1.06
SNX11-205ENST00000578861 PIANPQ8IYJ0 282 aa8.46□□□□□ -1.06
SNX11-205ENST00000578861 SIMC1Q8NDZ2 872 aa8.46□□□□□ -1.06
SNX11-205ENST00000578861 OR2Y1Q8NGV0 311 aa8.46□□□□□ -1.06
SNX11-205ENST00000578861 AGAP11Q8TF27 550 aa8.46□□□□□ -1.06
SNX11-205ENST00000578861 ELMO1Q92556 727 aa8.46□□□□□ -1.06
SNX11-205ENST00000578861 PTERQ96BW5 349 aa8.46□□□□□ -1.06
SNX11-205ENST00000578861 MBD6Q96DN6 1003 aa8.46□□□□□ -1.06
SNX11-205ENST00000578861 OR2A14Q96R47 310 aa8.46□□□□□ -1.06
SNX11-205ENST00000578861 C17orf62Q9BQA9 187 aa8.46□□□□□ -1.06
SNX11-205ENST00000578861 LHPPQ9H008 270 aa8.46□□□□□ -1.06
SNX11-205ENST00000578861 TSPAN10Q9H1Z9 355 aaPredicted RBP8.46□□□□□ -1.06
SNX11-205ENST00000578861 NEUROD4Q9HD90 331 aa8.46□□□□□ -1.06
SNX11-205ENST00000578861 SLC6A20Q9NP91 592 aa8.46□□□□□ -1.06
SNX11-205ENST00000578861 KCNJ16Q9NPI9 418 aa8.46□□□□□ -1.06
SNX11-205ENST00000578861 PIH1D1Q9NWS0 290 aaKnown RBP8.46□□□□□ -1.06
SNX11-205ENST00000578861 ASF1AQ9Y294 204 aa8.46□□□□□ -1.06
SNX11-205ENST00000578861 KLHL20Q9Y2M5 609 aa8.46□□□□□ -1.06
SNX11-205ENST00000578861 AP1M2Q9Y6Q5 423 aa8.46□□□□□ -1.06
SNX11-205ENST00000578861 IGLV3-16A0A075B6K0 115 aa8.45□□□□□ -1.06
SNX11-205ENST00000578861 A0A0J9YY10 115 aa8.45□□□□□ -1.06
SNX11-205ENST00000578861 FAM237BA0A1B0GVD1 139 aa8.45□□□□□ -1.06
SNX11-205ENST00000578861 OR51F1A6NGY5 319 aa8.45□□□□□ -1.06
SNX11-205ENST00000578861 AKR1B15C9JRZ8 316 aaPredicted RBP8.45□□□□□ -1.06
SNX11-205ENST00000578861 H3BMH7 237 aa8.45□□□□□ -1.06
SNX11-205ENST00000578861 IFNA2P01563 188 aa8.45□□□□□ -1.06
SNX11-205ENST00000578861 UMODP07911 640 aa8.45□□□□□ -1.06
SNX11-205ENST00000578861 HOXD4P09016 255 aaPredicted RBP8.45□□□□□ -1.06
SNX11-205ENST00000578861 TPBGLP0DKB5 382 aa8.45□□□□□ -1.06
SNX11-205ENST00000578861 ABOP16442 354 aa8.45□□□□□ -1.06
SNX11-205ENST00000578861 MSX1P28360 303 aa8.45□□□□□ -1.06
SNX11-205ENST00000578861 GABRA4P48169 554 aa8.45□□□□□ -1.06
SNX11-205ENST00000578861 HADHBP55084 474 aaKnown RBP8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms