RNA–Protein interactions for RNA: ENST00000577625.5

RNF43-202, Transcript of ring finger protein 43, humanhuman

TSL 2 BASIC

Gene RNF43, Length 2,198 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-202ENST00000577625 RDH14Q9HBH5 336 aa13.44□□□□□ -0.26
RNF43-202ENST00000577625 FBRSL1Q9HCM7 1045 aaKnown RBP13.44□□□□□ -0.26
RNF43-202ENST00000577625 ZNF225Q9UK10 706 aa13.44□□□□□ -0.26
RNF43-202ENST00000577625 COL4A2P08572 1712 aa13.44□□□□□ -0.26
RNF43-202ENST00000577625 PIP5K1BO14986 540 aa13.44□□□□□ -0.26
RNF43-202ENST00000577625 SLC22A1O15245 554 aa13.44□□□□□ -0.26
RNF43-202ENST00000577625 SGTAO43765 313 aa13.44□□□□□ -0.26
RNF43-202ENST00000577625 GPC4O75487 556 aa13.44□□□□□ -0.26
RNF43-202ENST00000577625 TPPPO94811 219 aa13.44□□□□□ -0.26
RNF43-202ENST00000577625 APODP05090 189 aa13.44□□□□□ -0.26
RNF43-202ENST00000577625 TGM1P22735 817 aa13.44□□□□□ -0.26
RNF43-202ENST00000577625 AOAHP28039 575 aa13.44□□□□□ -0.26
RNF43-202ENST00000577625 MSX2P35548 267 aaPredicted RBP13.44□□□□□ -0.26
RNF43-202ENST00000577625 MTHFRP42898 656 aa13.44□□□□□ -0.26
RNF43-202ENST00000577625 SOX9P48436 509 aa13.44□□□□□ -0.26
RNF43-202ENST00000577625 ELP6Q0PNE2 266 aa13.44□□□□□ -0.26
RNF43-202ENST00000577625 WDR45BQ5MNZ6 344 aa13.44□□□□□ -0.26
RNF43-202ENST00000577625 PPP4R4Q6NUP7 873 aa13.44□□□□□ -0.26
RNF43-202ENST00000577625 EFL1Q7Z2Z2 1120 aaKnown RBP13.44□□□□□ -0.26
RNF43-202ENST00000577625 SYVN1Q86TM6 617 aa13.44□□□□□ -0.26
RNF43-202ENST00000577625 HEATR4Q86WZ0 1026 aa13.44□□□□□ -0.26
RNF43-202ENST00000577625 RAVER1Q8IY67 606 aaKnown RBP13.44□□□□□ -0.26
RNF43-202ENST00000577625 NRSN1Q8IZ57 195 aa13.44□□□□□ -0.26
RNF43-202ENST00000577625 SPERTQ8NA61 448 aa13.44□□□□□ -0.26
RNF43-202ENST00000577625 CAPSLQ8WWF8 208 aa13.44□□□□□ -0.26
RNF43-202ENST00000577625 LRTOMTQ8WZ04 291 aa13.44□□□□□ -0.26
RNF43-202ENST00000577625 ATP6V1E2Q96A05 226 aa13.44□□□□□ -0.26
RNF43-202ENST00000577625 MSLNLQ96KJ4 702 aa13.44□□□□□ -0.26
RNF43-202ENST00000577625 VPS35Q96QK1 796 aa13.44□□□□□ -0.26
RNF43-202ENST00000577625 ZNF382Q96SR6 550 aa13.44□□□□□ -0.26
RNF43-202ENST00000577625 HOXD1Q9GZZ0 328 aa13.44□□□□□ -0.26
RNF43-202ENST00000577625 TUBB1Q9H4B7 451 aa13.44□□□□□ -0.26
RNF43-202ENST00000577625 HMG20AQ9NP66 347 aa13.44□□□□□ -0.26
RNF43-202ENST00000577625 RABL2BQ9UNT1 228 aa13.44□□□□□ -0.26
RNF43-202ENST00000577625 TRIOBPQ9H2D6 2365 aa13.43□□□□□ -0.26
RNF43-202ENST00000577625 LOC105371267A0A1B0GV96 52 aa13.43□□□□□ -0.26
RNF43-202ENST00000577625 ATP6AP2A0A1C7CYW4 349 aa13.43□□□□□ -0.26
RNF43-202ENST00000577625 M0QX08 132 aa13.43□□□□□ -0.26
RNF43-202ENST00000577625 WNT9AO14904 365 aa13.43□□□□□ -0.26
RNF43-202ENST00000577625 ATP6AP2O75787 350 aa13.43□□□□□ -0.26
RNF43-202ENST00000577625 AP2A2O94973 939 aa13.43□□□□□ -0.26
RNF43-202ENST00000577625 UROSP10746 265 aa13.43□□□□□ -0.26
RNF43-202ENST00000577625 RPL10P27635 214 aaKnown RBP13.43□□□□□ -0.26
RNF43-202ENST00000577625 PRDX3P30048 256 aaKnown RBP13.43□□□□□ -0.26
RNF43-202ENST00000577625 KRT6CP48668 564 aa13.43□□□□□ -0.26
RNF43-202ENST00000577625 ATP4BP51164 291 aa13.43□□□□□ -0.26
RNF43-202ENST00000577625 C18orf21Q32NC0 220 aaPredicted RBP13.43□□□□□ -0.26
RNF43-202ENST00000577625 BTN2A2Q8WVV5 523 aa13.43□□□□□ -0.26
RNF43-202ENST00000577625 AP2M1Q96CW1 435 aa13.43□□□□□ -0.26
RNF43-202ENST00000577625 ZNF486Q96H40 463 aaPredicted RBP13.43□□□□□ -0.26
RNF43-202ENST00000577625 UHRF1Q96T88 793 aaPredicted RBP13.43□□□□□ -0.26
RNF43-202ENST00000577625 AKTIPQ9H8T0 292 aa13.43□□□□□ -0.26
RNF43-202ENST00000577625 WDR41Q9HAD4 459 aa13.43□□□□□ -0.26
RNF43-202ENST00000577625 EYSQ5T1H1 3165 aa13.43□□□□□ -0.26
RNF43-202ENST00000577625 CFLARO15519 480 aa13.42□□□□□ -0.26
RNF43-202ENST00000577625 CRCPO75575 148 aa13.42□□□□□ -0.26
RNF43-202ENST00000577625 IDUAP35475 653 aa13.42□□□□□ -0.26
RNF43-202ENST00000577625 PSMD8P48556 350 aa13.42□□□□□ -0.26
RNF43-202ENST00000577625 ENPP2Q13822 863 aa13.42□□□□□ -0.26
RNF43-202ENST00000577625 PTK2BQ14289 1009 aa13.42□□□□□ -0.26
RNF43-202ENST00000577625 RBBP7Q16576 425 aa13.42□□□□□ -0.26
RNF43-202ENST00000577625 MTX3Q5HYI7 312 aa13.42□□□□□ -0.26
RNF43-202ENST00000577625 ZNF648Q5T619 568 aaPredicted RBP13.42□□□□□ -0.26
RNF43-202ENST00000577625 ZBTB49Q6ZSB9 765 aa13.42□□□□□ -0.26
RNF43-202ENST00000577625 GPRIN3Q6ZVF9 776 aa13.42□□□□□ -0.26
RNF43-202ENST00000577625 ERN2Q76MJ5 926 aaKnown RBP13.42□□□□□ -0.26
RNF43-202ENST00000577625 DSG4Q86SJ6 1040 aa13.42□□□□□ -0.26
RNF43-202ENST00000577625 PHYKPLQ8IUZ5 450 aa13.42□□□□□ -0.26
RNF43-202ENST00000577625 GLYATL1Q969I3 302 aa13.42□□□□□ -0.26
RNF43-202ENST00000577625 ASB9Q96DX5 294 aa13.42□□□□□ -0.26
RNF43-202ENST00000577625 GPN2Q9H9Y4 310 aaPredicted RBP13.42□□□□□ -0.26
RNF43-202ENST00000577625 NUMA1Q14980 2115 aa13.42□□□□□ -0.26
RNF43-202ENST00000577625 C1QTNF3-AMACRE9PGA6 284 aa13.42□□□□□ -0.26
RNF43-202ENST00000577625 TRIM38O00635 465 aa13.42□□□□□ -0.26
RNF43-202ENST00000577625 NUAK1O60285 661 aa13.42□□□□□ -0.26
RNF43-202ENST00000577625 VPS4BO75351 444 aa13.42□□□□□ -0.26
RNF43-202ENST00000577625 SOD1P00441 154 aa13.42□□□□□ -0.26
RNF43-202ENST00000577625 MSH3P20585 1137 aa13.42□□□□□ -0.26
RNF43-202ENST00000577625 NR4A1P22736 598 aa13.42□□□□□ -0.26
RNF43-202ENST00000577625 P2RY2P41231 377 aa13.42□□□□□ -0.26
RNF43-202ENST00000577625 ATXN3P54252 364 aaPredicted RBP13.42□□□□□ -0.26
RNF43-202ENST00000577625 NME5P56597 212 aa13.42□□□□□ -0.26
RNF43-202ENST00000577625 TUBA1BP68363 451 aa13.42□□□□□ -0.26
RNF43-202ENST00000577625 OCA2Q04671 838 aa13.42□□□□□ -0.26
RNF43-202ENST00000577625 HTR4Q13639 388 aa13.42□□□□□ -0.26
RNF43-202ENST00000577625 MAPRE2Q15555 327 aa13.42□□□□□ -0.26
RNF43-202ENST00000577625 PERM1Q5SV97 790 aa13.42□□□□□ -0.26
RNF43-202ENST00000577625 LDLRAP1Q5SW96 308 aa13.42□□□□□ -0.26
RNF43-202ENST00000577625 PLEKHS1Q5SXH7 462 aa13.42□□□□□ -0.26
RNF43-202ENST00000577625 SULT1C3Q6IMI6 304 aa13.42□□□□□ -0.26
RNF43-202ENST00000577625 METTL2BQ6P1Q9 378 aaKnown RBP13.42□□□□□ -0.26
RNF43-202ENST00000577625 KCTD8Q6ZWB6 473 aa13.42□□□□□ -0.26
RNF43-202ENST00000577625 TUBA1AQ71U36 451 aa13.42□□□□□ -0.26
RNF43-202ENST00000577625 MTSS1LQ765P7 747 aa13.42□□□□□ -0.26
RNF43-202ENST00000577625 GOLGA7Q7Z5G4 137 aa13.42□□□□□ -0.26
RNF43-202ENST00000577625 DDIASQ8IXT1 998 aa13.42□□□□□ -0.26
RNF43-202ENST00000577625 PACRGLQ8N7B6 248 aa13.42□□□□□ -0.26
RNF43-202ENST00000577625 MFSD2AQ8NA29 543 aa13.42□□□□□ -0.26
RNF43-202ENST00000577625 SMRP1Q8NCR6 262 aa13.42□□□□□ -0.26
RNF43-202ENST00000577625 HMGCLL1Q8TB92 370 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms