RNA–Protein interactions for RNA: ENST00000577539.1

VAPA-203, Transcript of VAMP associated protein A, humanhuman

Gene VAPA, Length 3,760 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-203ENST00000577539 TPGS1Q6ZTW0 290 aa5.24□□□□□ -1.57
VAPA-203ENST00000577539 GOLGA7Q7Z5G4 137 aa5.24□□□□□ -1.57
VAPA-203ENST00000577539 GTF2IRD2Q86UP8 949 aa5.24□□□□□ -1.57
VAPA-203ENST00000577539 HID1Q8IV36 788 aa5.24□□□□□ -1.57
VAPA-203ENST00000577539 STK40Q8N2I9 435 aa5.24□□□□□ -1.57
VAPA-203ENST00000577539 OR10A6Q8NH74 314 aa5.24□□□□□ -1.57
VAPA-203ENST00000577539 PROKR1Q8TCW9 393 aa5.24□□□□□ -1.57
VAPA-203ENST00000577539 KCNJ9Q92806 393 aa5.24□□□□□ -1.57
VAPA-203ENST00000577539 SPATA17Q96L03 361 aa5.24□□□□□ -1.57
VAPA-203ENST00000577539 SLX1AQ9BQ83 275 aa5.24□□□□□ -1.57
VAPA-203ENST00000577539 ACTR8Q9H981 624 aa5.24□□□□□ -1.57
VAPA-203ENST00000577539 AGPAT4Q9NRZ5 378 aa5.24□□□□□ -1.57
VAPA-203ENST00000577539 ABCD2Q9UBJ2 740 aa5.24□□□□□ -1.57
VAPA-203ENST00000577539 OPTCQ9UBM4 332 aa5.24□□□□□ -1.57
VAPA-203ENST00000577539 EIF3LQ9Y262 564 aaKnown RBP5.24□□□□□ -1.57
VAPA-203ENST00000577539 PCDHA9Q9Y5H5 950 aa5.24□□□□□ -1.57
VAPA-203ENST00000577539 MAGED1Q9Y5V3 778 aaPredicted RBP5.24□□□□□ -1.57
VAPA-203ENST00000577539 MIA3Q5JRA6 1907 aa5.23□□□□□ -1.57
VAPA-203ENST00000577539 TDRD15B5MCY1 1934 aaKnown RBP5.23□□□□□ -1.57
VAPA-203ENST00000577539 E2F3O00716 465 aa5.23□□□□□ -1.57
VAPA-203ENST00000577539 DFNA5O60443 496 aa5.23□□□□□ -1.57
VAPA-203ENST00000577539 OTCP00480 354 aa5.23□□□□□ -1.57
VAPA-203ENST00000577539 ANXA6P08133 673 aa5.23□□□□□ -1.57
VAPA-203ENST00000577539 RFC2P35250 354 aa5.23□□□□□ -1.57
VAPA-203ENST00000577539 CSKP41240 450 aa5.23□□□□□ -1.57
VAPA-203ENST00000577539 IST1P53990 364 aa5.23□□□□□ -1.57
VAPA-203ENST00000577539 EEFSECP57772 596 aaKnown RBP5.23□□□□□ -1.57
VAPA-203ENST00000577539 GABREP78334 506 aa5.23□□□□□ -1.57
VAPA-203ENST00000577539 FAM189BP81408 668 aa5.23□□□□□ -1.57
VAPA-203ENST00000577539 CACNG1Q06432 222 aa5.23□□□□□ -1.57
VAPA-203ENST00000577539 BCL2L1Q07817 233 aa5.23□□□□□ -1.57
VAPA-203ENST00000577539 DCTN2Q13561 401 aaKnown RBP5.23□□□□□ -1.57
VAPA-203ENST00000577539 ABRAXAS2Q15018 415 aa5.23□□□□□ -1.57
VAPA-203ENST00000577539 MAPKAPK3Q16644 382 aa5.23□□□□□ -1.57
VAPA-203ENST00000577539 USP41Q3LFD5 358 aa5.23□□□□□ -1.57
VAPA-203ENST00000577539 FAM174BQ3ZCQ3 159 aa5.23□□□□□ -1.57
VAPA-203ENST00000577539 CCDC92Q53HC0 331 aaPredicted RBP5.23□□□□□ -1.57
VAPA-203ENST00000577539 EXOSC6Q5RKV6 272 aaKnown RBP5.23□□□□□ -1.57
VAPA-203ENST00000577539 ZCCHC8Q6NZY4 707 aaKnown RBP5.23□□□□□ -1.57
VAPA-203ENST00000577539 C8orf82Q6P1X6 216 aaPredicted RBP5.23□□□□□ -1.57
VAPA-203ENST00000577539 MBOAT1Q6ZNC8 495 aa5.23□□□□□ -1.57
VAPA-203ENST00000577539 GCNT7Q6ZNI0 430 aa5.23□□□□□ -1.57
VAPA-203ENST00000577539 NAT16Q8N8M0 369 aa5.23□□□□□ -1.57
VAPA-203ENST00000577539 ARL14EPQ8N8R7 260 aaPredicted RBP5.23□□□□□ -1.57
VAPA-203ENST00000577539 CCDC138Q96M89 665 aa5.23□□□□□ -1.57
VAPA-203ENST00000577539 CASD1Q96PB1 797 aa5.23□□□□□ -1.57
VAPA-203ENST00000577539 UHRF1Q96T88 793 aaPredicted RBP5.23□□□□□ -1.57
VAPA-203ENST00000577539 CGREF1Q99674 301 aa5.23□□□□□ -1.57
VAPA-203ENST00000577539 CCDC90BQ9GZT6 254 aa5.23□□□□□ -1.57
VAPA-203ENST00000577539 COMMD8Q9NX08 183 aa5.23□□□□□ -1.57
VAPA-203ENST00000577539 NUDT4Q9NZJ9 180 aa5.23□□□□□ -1.57
VAPA-203ENST00000577539 WARS2Q9UGM6 360 aaKnown RBP5.23□□□□□ -1.57
VAPA-203ENST00000577539 RIMKLBQ9ULI2 386 aa5.23□□□□□ -1.57
VAPA-203ENST00000577539 CDC14AQ9UNH5 594 aa5.23□□□□□ -1.57
VAPA-203ENST00000577539 U3KQE9 123 aa5.23□□□□□ -1.57
VAPA-203ENST00000577539 ZNF236Q9UL36 1845 aa5.23□□□□□ -1.57
VAPA-203ENST00000577539 A0A1W2PQ45 241 aaPredicted RBP5.23□□□□□ -1.57
VAPA-203ENST00000577539 A0A1W2PQY0 241 aa5.23□□□□□ -1.57
VAPA-203ENST00000577539 ASPDHA6ND91 283 aa5.23□□□□□ -1.57
VAPA-203ENST00000577539 J3KRW8 73 aa5.23□□□□□ -1.57
VAPA-203ENST00000577539 TERTO14746 1132 aaKnown RBP5.23□□□□□ -1.57
VAPA-203ENST00000577539 ULK1O75385 1050 aa5.23□□□□□ -1.57
VAPA-203ENST00000577539 EEDO75530 441 aaKnown RBP5.23□□□□□ -1.57
VAPA-203ENST00000577539 CLDN7O95471 211 aa5.23□□□□□ -1.57
VAPA-203ENST00000577539 SEC24AO95486 1093 aa5.23□□□□□ -1.57
VAPA-203ENST00000577539 TSPAN12O95859 305 aa5.23□□□□□ -1.57
VAPA-203ENST00000577539 CR2P20023 1033 aa5.23□□□□□ -1.57
VAPA-203ENST00000577539 CAPGP40121 348 aa5.23□□□□□ -1.57
VAPA-203ENST00000577539 CCT8P50990 548 aa5.23□□□□□ -1.57
VAPA-203ENST00000577539 CAP1Q01518 475 aa5.23□□□□□ -1.57
VAPA-203ENST00000577539 FOXM1Q08050 763 aa5.23□□□□□ -1.57
VAPA-203ENST00000577539 MTA1Q13330 715 aa5.23□□□□□ -1.57
VAPA-203ENST00000577539 LAPTM5Q13571 262 aa5.23□□□□□ -1.57
VAPA-203ENST00000577539 BTG3Q14201 252 aaPredicted RBP5.23□□□□□ -1.57
VAPA-203ENST00000577539 C16orf72Q14CZ0 275 aa5.23□□□□□ -1.57
VAPA-203ENST00000577539 FAM98BQ52LJ0 330 aaKnown RBP5.23□□□□□ -1.57
VAPA-203ENST00000577539 PDCD4Q53EL6 469 aaKnown RBP5.23□□□□□ -1.57
VAPA-203ENST00000577539 LRRC73Q5JTD7 316 aa5.23□□□□□ -1.57
VAPA-203ENST00000577539 LINC00114Q6XXX2 140 aa5.23□□□□□ -1.57
VAPA-203ENST00000577539 OVCH1Q7RTY7 1134 aa5.23□□□□□ -1.57
VAPA-203ENST00000577539 OR2T12Q8NG77 320 aa5.23□□□□□ -1.57
VAPA-203ENST00000577539 OR10Q1Q8NGQ4 319 aa5.23□□□□□ -1.57
VAPA-203ENST00000577539 HM13Q8TCT9 377 aa5.23□□□□□ -1.57
VAPA-203ENST00000577539 CD99L2Q8TCZ2 262 aa5.23□□□□□ -1.57
VAPA-203ENST00000577539 BCL7CQ8WUZ0 217 aaPredicted RBP5.23□□□□□ -1.57
VAPA-203ENST00000577539 AUTS2Q8WXX7 1259 aa5.23□□□□□ -1.57
VAPA-203ENST00000577539 GFM2Q969S9 779 aaKnown RBP5.23□□□□□ -1.57
VAPA-203ENST00000577539 ZNF382Q96SR6 550 aa5.23□□□□□ -1.57
VAPA-203ENST00000577539 RBM38Q9H0Z9 239 aaKnown RBP5.23□□□□□ -1.57
VAPA-203ENST00000577539 CXorf21Q9HAI6 301 aa5.23□□□□□ -1.57
VAPA-203ENST00000577539 PREBQ9HCU5 417 aa5.23□□□□□ -1.57
VAPA-203ENST00000577539 FARSBQ9NSD9 589 aaKnown RBP5.23□□□□□ -1.57
VAPA-203ENST00000577539 IL17CQ9P0M4 197 aa5.23□□□□□ -1.57
VAPA-203ENST00000577539 EBF1Q9UH73 591 aa5.23□□□□□ -1.57
VAPA-203ENST00000577539 VPS51Q9UID3 782 aa5.23□□□□□ -1.57
VAPA-203ENST00000577539 PADI4Q9UM07 663 aa5.23□□□□□ -1.57
VAPA-203ENST00000577539 DHRS7Q9Y394 339 aa5.23□□□□□ -1.57
VAPA-203ENST00000577539 U3KQV3 271 aa5.23□□□□□ -1.57
VAPA-203ENST00000577539 MYLKQ15746 1914 aa5.23□□□□□ -1.57
VAPA-203ENST00000577539 GOLGA4Q13439 2230 aaKnown RBP5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms