RNA–Protein interactions for RNA: ENST00000577393.1

PPP4R1-204, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 531 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-204ENST00000577393 C1QL1O75973 258 aa25.36■■□□□ 1.65
PPP4R1-204ENST00000577393 SLC16A8O95907 504 aa25.36■■□□□ 1.65
PPP4R1-204ENST00000577393 SYF2O95926 243 aaKnown RBP25.36■■□□□ 1.65
PPP4R1-204ENST00000577393 HSD17B2P37059 387 aa25.36■■□□□ 1.65
PPP4R1-204ENST00000577393 RGS4P49798 205 aa25.36■■□□□ 1.65
PPP4R1-204ENST00000577393 PNLIPRP1P54315 467 aa25.36■■□□□ 1.65
PPP4R1-204ENST00000577393 RPS15P62841 145 aaKnown RBP25.36■■□□□ 1.65
PPP4R1-204ENST00000577393 ERV3-1Q14264 604 aa25.36■■□□□ 1.65
PPP4R1-204ENST00000577393 PTCHD3Q3KNS1 767 aa25.36■■□□□ 1.65
PPP4R1-204ENST00000577393 HECTD2Q5U5R9 776 aa25.36■■□□□ 1.65
PPP4R1-204ENST00000577393 BORAQ6PGQ7 559 aa25.36■■□□□ 1.65
PPP4R1-204ENST00000577393 SUSD1Q6UWL2 747 aa25.36■■□□□ 1.65
PPP4R1-204ENST00000577393 UBE2R2Q712K3 238 aaPredicted RBP25.36■■□□□ 1.65
PPP4R1-204ENST00000577393 SYTL1Q8IYJ3 562 aa25.36■■□□□ 1.65
PPP4R1-204ENST00000577393 PYROXD1Q8WU10 500 aa25.36■■□□□ 1.65
PPP4R1-204ENST00000577393 ACAT2Q9BWD1 397 aa25.36■■□□□ 1.65
PPP4R1-204ENST00000577393 RAB17Q9H0T7 212 aa25.36■■□□□ 1.65
PPP4R1-204ENST00000577393 ACTL8Q9H568 366 aa25.36■■□□□ 1.65
PPP4R1-204ENST00000577393 SAYSD1Q9NPB0 183 aa25.36■■□□□ 1.65
PPP4R1-204ENST00000577393 IRAK4Q9NWZ3 460 aa25.36■■□□□ 1.65
PPP4R1-204ENST00000577393 CORO1CQ9ULV4 474 aaPredicted RBP25.36■■□□□ 1.65
PPP4R1-204ENST00000577393 FARSAQ9Y285 508 aaKnown RBP25.36■■□□□ 1.65
PPP4R1-204ENST00000577393 VWA7Q9Y334 891 aa25.36■■□□□ 1.65
PPP4R1-204ENST00000577393 PSAT1Q9Y617 370 aa25.36■■□□□ 1.65
PPP4R1-204ENST00000577393 KALRNO60229 2985 aa25.36■■□□□ 1.65
PPP4R1-204ENST00000577393 EIF3HO15372 352 aaKnown RBP eCLIP25.35■■□□□ 1.65
PPP4R1-204ENST00000577393 ZSCAN9O15535 394 aaPredicted RBP25.35■■□□□ 1.65
PPP4R1-204ENST00000577393 FAM87AP0C7U9 286 aa25.35■■□□□ 1.65
PPP4R1-204ENST00000577393 PTPN4P29074 926 aa25.35■■□□□ 1.65
PPP4R1-204ENST00000577393 PLTPP55058 493 aa25.35■■□□□ 1.65
PPP4R1-204ENST00000577393 RPS18P62269 152 aaKnown RBP25.35■■□□□ 1.65
PPP4R1-204ENST00000577393 DEFB109BQ30KR1 87 aa25.35■■□□□ 1.65
PPP4R1-204ENST00000577393 LRRC8EQ6NSJ5 796 aa25.35■■□□□ 1.65
PPP4R1-204ENST00000577393 TLDC1Q6P9B6 456 aa25.35■■□□□ 1.65
PPP4R1-204ENST00000577393 CAPN12Q6ZSI9 719 aa25.35■■□□□ 1.65
PPP4R1-204ENST00000577393 ZNF655Q8N720 491 aaPredicted RBP25.35■■□□□ 1.65
PPP4R1-204ENST00000577393 ZNF480Q8WV37 535 aa25.35■■□□□ 1.65
PPP4R1-204ENST00000577393 MED8Q96G25 268 aa25.35■■□□□ 1.65
PPP4R1-204ENST00000577393 KLK4Q9Y5K2 254 aa25.35■■□□□ 1.65
PPP4R1-204ENST00000577393 PCM1Q15154 2024 aa25.34■■□□□ 1.65
PPP4R1-204ENST00000577393 ZNF839A8K0R7 811 aa25.34■■□□□ 1.65
PPP4R1-204ENST00000577393 FURINP09958 794 aa25.34■■□□□ 1.65
PPP4R1-204ENST00000577393 RPA3P35244 121 aaPredicted RBP25.34■■□□□ 1.65
PPP4R1-204ENST00000577393 PGGT1BP53609 377 aa25.34■■□□□ 1.65
PPP4R1-204ENST00000577393 YBX1P67809 324 aaKnown RBP25.34■■□□□ 1.65
PPP4R1-204ENST00000577393 TSTA3Q13630 321 aaPredicted RBP25.34■■□□□ 1.65
PPP4R1-204ENST00000577393 COL9A2Q14055 689 aaPredicted RBP25.34■■□□□ 1.65
PPP4R1-204ENST00000577393 TRADDQ15628 312 aa25.34■■□□□ 1.65
PPP4R1-204ENST00000577393 ZC3H12BQ5HYM0 836 aaKnown RBP25.34■■□□□ 1.65
PPP4R1-204ENST00000577393 ZNF385CQ66K41 422 aaPredicted RBP25.34■■□□□ 1.65
PPP4R1-204ENST00000577393 FAM45BPQ6NSW5 357 aa25.34■■□□□ 1.65
PPP4R1-204ENST00000577393 RHBDD2Q6NTF9 364 aa25.34■■□□□ 1.65
PPP4R1-204ENST00000577393 PPFIBP2Q8ND30 876 aa25.34■■□□□ 1.65
PPP4R1-204ENST00000577393 FAM45AQ8TCE6 357 aa25.34■■□□□ 1.65
PPP4R1-204ENST00000577393 ZNF592Q92610 1267 aa25.34■■□□□ 1.65
PPP4R1-204ENST00000577393 DLG3Q92796 817 aa25.34■■□□□ 1.65
PPP4R1-204ENST00000577393 ADAMTS6Q9UKP5 1117 aa25.34■■□□□ 1.65
PPP4R1-204ENST00000577393 CTSVO60911 334 aa25.33■■□□□ 1.65
PPP4R1-204ENST00000577393 RECKO95980 971 aa25.33■■□□□ 1.65
PPP4R1-204ENST00000577393 FDXRP22570 491 aa25.33■■□□□ 1.65
PPP4R1-204ENST00000577393 CMPK1P30085 196 aa25.33■■□□□ 1.65
PPP4R1-204ENST00000577393 PDAP1Q13442 181 aaKnown RBP25.33■■□□□ 1.65
PPP4R1-204ENST00000577393 STRA8Q7Z7C7 330 aa25.33■■□□□ 1.65
PPP4R1-204ENST00000577393 PALM2Q8IXS6 379 aa25.33■■□□□ 1.65
PPP4R1-204ENST00000577393 MYO1HQ8N1T3 1032 aa25.33■■□□□ 1.65
PPP4R1-204ENST00000577393 LINGO1Q96FE5 620 aa25.33■■□□□ 1.65
PPP4R1-204ENST00000577393 OLFM1Q99784 485 aa25.33■■□□□ 1.65
PPP4R1-204ENST00000577393 DPH2Q9BQC3 489 aaPredicted RBP25.33■■□□□ 1.65
PPP4R1-204ENST00000577393 CDC14CA4D256 554 aa25.32■■□□□ 1.64
PPP4R1-204ENST00000577393 E7ENX8 843 aa25.32■■□□□ 1.64
PPP4R1-204ENST00000577393 NRP2O60462 931 aa25.32■■□□□ 1.64
PPP4R1-204ENST00000577393 C8GP07360 202 aa25.32■■□□□ 1.64
PPP4R1-204ENST00000577393 CAPN1P07384 714 aa25.32■■□□□ 1.64
PPP4R1-204ENST00000577393 RAB40ALP0C0E4 278 aa25.32■■□□□ 1.64
PPP4R1-204ENST00000577393 AGXTP21549 392 aa25.32■■□□□ 1.64
PPP4R1-204ENST00000577393 SSTR1P30872 391 aa25.32■■□□□ 1.64
PPP4R1-204ENST00000577393 CCR10P46092 362 aa25.32■■□□□ 1.64
PPP4R1-204ENST00000577393 CAV1Q03135 178 aa25.32■■□□□ 1.64
PPP4R1-204ENST00000577393 TAP2Q03519 686 aa25.32■■□□□ 1.64
PPP4R1-204ENST00000577393 WHAMMP3Q1A5X7 153 aa25.32■■□□□ 1.64
PPP4R1-204ENST00000577393 C1orf189Q5VU69 101 aa25.32■■□□□ 1.64
PPP4R1-204ENST00000577393 FAM198BQ6UWH4 519 aa25.32■■□□□ 1.64
PPP4R1-204ENST00000577393 SLC26A11Q86WA9 606 aa25.32■■□□□ 1.64
PPP4R1-204ENST00000577393 ZC3HC1Q86WB0 502 aaKnown RBP25.32■■□□□ 1.64
PPP4R1-204ENST00000577393 ZNF843Q8N446 348 aa25.32■■□□□ 1.64
PPP4R1-204ENST00000577393 ENDOVQ8N8Q3 282 aaKnown RBP25.32■■□□□ 1.64
PPP4R1-204ENST00000577393 FBXO25Q8TCJ0 367 aa25.32■■□□□ 1.64
PPP4R1-204ENST00000577393 MCOLN3Q8TDD5 553 aa25.32■■□□□ 1.64
PPP4R1-204ENST00000577393 DPH7Q9BTV6 452 aa25.32■■□□□ 1.64
PPP4R1-204ENST00000577393 NLNQ9BYT8 704 aa25.32■■□□□ 1.64
PPP4R1-204ENST00000577393 FAM117AQ9C073 453 aa25.32■■□□□ 1.64
PPP4R1-204ENST00000577393 SLC6A20Q9NP91 592 aa25.32■■□□□ 1.64
PPP4R1-204ENST00000577393 MRPS30Q9NP92 439 aaKnown RBP25.32■■□□□ 1.64
PPP4R1-204ENST00000577393 SMYD2Q9NRG4 433 aa25.32■■□□□ 1.64
PPP4R1-204ENST00000577393 DHCR7Q9UBM7 475 aaKnown RBP25.32■■□□□ 1.64
PPP4R1-204ENST00000577393 TAC3Q9UHF0 121 aa25.32■■□□□ 1.64
PPP4R1-204ENST00000577393 SRPK3Q9UPE1 567 aa25.32■■□□□ 1.64
PPP4R1-204ENST00000577393 PDE10AQ9Y233 779 aa25.32■■□□□ 1.64
PPP4R1-204ENST00000577393 TSPAN12O95859 305 aa25.31■■□□□ 1.64
PPP4R1-204ENST00000577393 IMPA1P29218 277 aa25.31■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms