RNA–Protein interactions for RNA: ENST00000577197.1

TSEN54-204, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 2

Gene TSEN54, Length 650 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-204ENST00000577197 ABCA7Q8IZY2 2146 aa12.05□□□□□ -0.48
TSEN54-204ENST00000577197 THADAQ6YHU6 1953 aa12.05□□□□□ -0.48
TSEN54-204ENST00000577197 SPAG17Q6Q759 2223 aa12.05□□□□□ -0.48
TSEN54-204ENST00000577197 YKT6O15498 198 aa12.05□□□□□ -0.48
TSEN54-204ENST00000577197 DFNA5O60443 496 aa12.05□□□□□ -0.48
TSEN54-204ENST00000577197 DIAPH2O60879 1101 aa12.05□□□□□ -0.48
TSEN54-204ENST00000577197 CCNDBP1O95273 360 aa12.05□□□□□ -0.48
TSEN54-204ENST00000577197 WNT1P04628 370 aa12.05□□□□□ -0.48
TSEN54-204ENST00000577197 RETP07949 1114 aa12.05□□□□□ -0.48
TSEN54-204ENST00000577197 PRR35P0CG20 571 aa12.05□□□□□ -0.48
TSEN54-204ENST00000577197 CTSEP14091 401 aa12.05□□□□□ -0.48
TSEN54-204ENST00000577197 RPL10P27635 214 aaKnown RBP12.05□□□□□ -0.48
TSEN54-204ENST00000577197 GSTM2P28161 218 aa12.05□□□□□ -0.48
TSEN54-204ENST00000577197 HMOX2P30519 316 aa12.05□□□□□ -0.48
TSEN54-204ENST00000577197 CCR10P46092 362 aa12.05□□□□□ -0.48
TSEN54-204ENST00000577197 RXRGP48443 463 aa12.05□□□□□ -0.48
TSEN54-204ENST00000577197 BTKQ06187 659 aa12.05□□□□□ -0.48
TSEN54-204ENST00000577197 CLCA4Q14CN2 919 aa12.05□□□□□ -0.48
TSEN54-204ENST00000577197 LPAL2Q16609 132 aa12.05□□□□□ -0.48
TSEN54-204ENST00000577197 LACTB2Q53H82 288 aaPredicted RBP12.05□□□□□ -0.48
TSEN54-204ENST00000577197 ATG9BQ674R7 924 aa12.05□□□□□ -0.48
TSEN54-204ENST00000577197 SLC23A3Q6PIS1 610 aa12.05□□□□□ -0.48
TSEN54-204ENST00000577197 CHSY3Q70JA7 882 aa12.05□□□□□ -0.48
TSEN54-204ENST00000577197 LARP4Q71RC2 724 aaKnown RBP eCLIP12.05□□□□□ -0.485e-6■■□□□ 12.4
TSEN54-204ENST00000577197 CLNKQ7Z7G1 428 aa12.05□□□□□ -0.48
TSEN54-204ENST00000577197 GKN2Q86XP6 184 aa12.05□□□□□ -0.48
TSEN54-204ENST00000577197 CPSF7Q8N684 471 aaKnown RBP12.05□□□□□ -0.48
TSEN54-204ENST00000577197 METTL6Q8TCB7 284 aa12.05□□□□□ -0.48
TSEN54-204ENST00000577197 MAPK15Q8TD08 544 aa12.05□□□□□ -0.48
TSEN54-204ENST00000577197 SLC22A18Q96BI1 424 aa12.05□□□□□ -0.48
TSEN54-204ENST00000577197 PTCD3Q96EY7 689 aaKnown RBP12.05□□□□□ -0.48
TSEN54-204ENST00000577197 RILPQ96NA2 401 aa12.05□□□□□ -0.48
TSEN54-204ENST00000577197 NUF2Q9BZD4 464 aa12.05□□□□□ -0.48
TSEN54-204ENST00000577197 NT5DC2Q9H857 520 aa12.05□□□□□ -0.48
TSEN54-204ENST00000577197 PELI2Q9HAT8 420 aa12.05□□□□□ -0.48
TSEN54-204ENST00000577197 INTS7Q9NVH2 962 aaKnown RBP12.05□□□□□ -0.48
TSEN54-204ENST00000577197 ADGRE2Q9UHX3 823 aa12.05□□□□□ -0.48
TSEN54-204ENST00000577197 GMEB2Q9UKD1 530 aa12.05□□□□□ -0.48
TSEN54-204ENST00000577197 PNMA8BQ9ULN7 279 aaPredicted RBP12.05□□□□□ -0.48
TSEN54-204ENST00000577197 DYRK1BQ9Y463 629 aa12.05□□□□□ -0.48
TSEN54-204ENST00000577197 PCDHGA11Q9Y5H2 935 aa12.05□□□□□ -0.48
TSEN54-204ENST00000577197 KCNE1BA0A087WTH5 132 aa12.04□□□□□ -0.48
TSEN54-204ENST00000577197 LMO7DNF2Z398 122 aa12.04□□□□□ -0.48
TSEN54-204ENST00000577197 SLC28A1O00337 649 aa12.04□□□□□ -0.48
TSEN54-204ENST00000577197 PPP6CO00743 305 aa12.04□□□□□ -0.48
TSEN54-204ENST00000577197 ULK1O75385 1050 aa12.04□□□□□ -0.48
TSEN54-204ENST00000577197 OR4F21O95013 312 aa12.04□□□□□ -0.48
TSEN54-204ENST00000577197 CAPN1P07384 714 aa12.04□□□□□ -0.48
TSEN54-204ENST00000577197 NPPBP16860 134 aa12.04□□□□□ -0.48
TSEN54-204ENST00000577197 JUNDP17535 347 aa12.04□□□□□ -0.48
TSEN54-204ENST00000577197 CXCR2P25025 360 aa12.04□□□□□ -0.48
TSEN54-204ENST00000577197 SERPINB3P29508 390 aa12.04□□□□□ -0.48
TSEN54-204ENST00000577197 PRDX6P30041 224 aa12.04□□□□□ -0.48
TSEN54-204ENST00000577197 MPLP40238 635 aa12.04□□□□□ -0.48
TSEN54-204ENST00000577197 GDF5P43026 501 aa12.04□□□□□ -0.48
TSEN54-204ENST00000577197 FASLGP48023 281 aa12.04□□□□□ -0.48
TSEN54-204ENST00000577197 CSNK1EP49674 416 aaKnown RBP12.04□□□□□ -0.48
TSEN54-204ENST00000577197 UBE2IP63279 158 aaKnown RBP12.04□□□□□ -0.48
TSEN54-204ENST00000577197 IRF8Q02556 426 aa12.04□□□□□ -0.48
TSEN54-204ENST00000577197 RELAQ04206 551 aa12.04□□□□□ -0.48
TSEN54-204ENST00000577197 CSTF3Q12996 717 aaKnown RBP12.04□□□□□ -0.48
TSEN54-204ENST00000577197 IFT88Q13099 833 aa12.04□□□□□ -0.48
TSEN54-204ENST00000577197 MAD2L1Q13257 205 aaPredicted RBP12.04□□□□□ -0.48
TSEN54-204ENST00000577197 C18orf21Q32NC0 220 aaPredicted RBP12.04□□□□□ -0.48
TSEN54-204ENST00000577197 GALNTL6Q49A17 601 aa12.04□□□□□ -0.48
TSEN54-204ENST00000577197 CCSMST1Q4G0I0 132 aa12.04□□□□□ -0.48
TSEN54-204ENST00000577197 SLC9B1Q4ZJI4 515 aa12.04□□□□□ -0.48
TSEN54-204ENST00000577197 PRAMEF14Q5SWL7 426 aa12.04□□□□□ -0.48
TSEN54-204ENST00000577197 PRAMEF13Q5VWM6 474 aa12.04□□□□□ -0.48
TSEN54-204ENST00000577197 SLCO4C1Q6ZQN7 724 aa12.04□□□□□ -0.48
TSEN54-204ENST00000577197 CCDC121Q6ZUS5 278 aa12.04□□□□□ -0.48
TSEN54-204ENST00000577197 SPATA19Q7Z5L4 167 aa12.04□□□□□ -0.48
TSEN54-204ENST00000577197 MTDHQ86UE4 582 aaKnown RBP12.04□□□□□ -0.48
TSEN54-204ENST00000577197 FAM9CQ8IZT9 166 aa12.04□□□□□ -0.48
TSEN54-204ENST00000577197 SFRP1Q8N474 314 aa12.04□□□□□ -0.48
TSEN54-204ENST00000577197 FITM2Q8N6M3 262 aa12.04□□□□□ -0.48
TSEN54-204ENST00000577197 SNX31Q8N9S9 440 aa12.04□□□□□ -0.48
TSEN54-204ENST00000577197 ABHD11Q8NFV4 315 aa12.04□□□□□ -0.48
TSEN54-204ENST00000577197 ESAMQ96AP7 390 aa12.04□□□□□ -0.48
TSEN54-204ENST00000577197 MOCOSQ96EN8 888 aa12.04□□□□□ -0.48
TSEN54-204ENST00000577197 PPP3R2Q96LZ3 170 aa12.04□□□□□ -0.48
TSEN54-204ENST00000577197 FERD3LQ96RJ6 166 aa12.04□□□□□ -0.48
TSEN54-204ENST00000577197 EBF4Q9BQW3 602 aa12.04□□□□□ -0.48
TSEN54-204ENST00000577197 LRRC61Q9BV99 259 aa12.04□□□□□ -0.48
TSEN54-204ENST00000577197 SARGQ9BW04 601 aa12.04□□□□□ -0.48
TSEN54-204ENST00000577197 ATG10Q9H0Y0 220 aa12.04□□□□□ -0.48
TSEN54-204ENST00000577197 ZNF385DQ9H6B1 395 aa12.04□□□□□ -0.48
TSEN54-204ENST00000577197 BRF2Q9HAW0 419 aa12.04□□□□□ -0.48
TSEN54-204ENST00000577197 TNFRSF12AQ9NP84 129 aa12.04□□□□□ -0.48
TSEN54-204ENST00000577197 PRDM8Q9NQV8 689 aa12.04□□□□□ -0.48
TSEN54-204ENST00000577197 IMP3Q9NV31 184 aaKnown RBP12.04□□□□□ -0.48
TSEN54-204ENST00000577197 ASIC5Q9NY37 505 aa12.04□□□□□ -0.48
TSEN54-204ENST00000577197 TAAR2Q9P1P5 351 aa12.04□□□□□ -0.48
TSEN54-204ENST00000577197 ZFP69BQ9UJL9 534 aa12.04□□□□□ -0.48
TSEN54-204ENST00000577197 SLC6A14Q9UN76 642 aa12.04□□□□□ -0.48
TSEN54-204ENST00000577197 PSMD13Q9UNM6 376 aa12.04□□□□□ -0.48
TSEN54-204ENST00000577197 ENTPD2Q9Y5L3 495 aa12.04□□□□□ -0.48
TSEN54-204ENST00000577197 CACNA1HO95180 2353 aa12.04□□□□□ -0.48
TSEN54-204ENST00000577197 TMEM233B4DJY2 109 aa12.03□□□□□ -0.48
TSEN54-204ENST00000577197 PROB1E7EW31 1015 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms