RNA–Protein interactions for RNA: ENST00000576862.5

NUP88-213, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 788 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-213ENST00000576862 AKR1B1P15121 316 aa4.66□□□□□ -1.66
NUP88-213ENST00000576862 MPZP25189 248 aa4.66□□□□□ -1.66
NUP88-213ENST00000576862 HILS1P60008 231 aa4.66□□□□□ -1.66
NUP88-213ENST00000576862 CDR2Q01850 454 aa4.66□□□□□ -1.66
NUP88-213ENST00000576862 SP3Q02447 781 aa4.66□□□□□ -1.66
NUP88-213ENST00000576862 ZNF415Q09FC8 603 aa4.66□□□□□ -1.66
NUP88-213ENST00000576862 ZFP69Q49AA0 526 aa4.66□□□□□ -1.66
NUP88-213ENST00000576862 CCDC92Q53HC0 331 aaPredicted RBP4.66□□□□□ -1.66
NUP88-213ENST00000576862 XKR3Q5GH77 459 aa4.66□□□□□ -1.66
NUP88-213ENST00000576862 ELFN2Q5R3F8 820 aa4.66□□□□□ -1.66
NUP88-213ENST00000576862 ADAMTSL4-AS1Q5T5F5 129 aa4.66□□□□□ -1.66
NUP88-213ENST00000576862 ZC2HC1BQ5TFG8 222 aa4.66□□□□□ -1.66
NUP88-213ENST00000576862 BHLHB9Q6PI77 547 aa4.66□□□□□ -1.66
NUP88-213ENST00000576862 ZNF611Q8N823 705 aa4.66□□□□□ -1.66
NUP88-213ENST00000576862 TSPAN14Q8NG11 270 aa4.66□□□□□ -1.66
NUP88-213ENST00000576862 PHLDA1Q8WV24 401 aaPredicted RBP4.66□□□□□ -1.66
NUP88-213ENST00000576862 SLAMF9Q96A28 289 aa4.66□□□□□ -1.66
NUP88-213ENST00000576862 TRIM44Q96DX7 344 aaPredicted RBP4.66□□□□□ -1.66
NUP88-213ENST00000576862 NUP85Q9BW27 656 aa4.66□□□□□ -1.66
NUP88-213ENST00000576862 ANKZF1Q9H8Y5 726 aa4.66□□□□□ -1.66
NUP88-213ENST00000576862 DPP3Q9NY33 737 aa4.66□□□□□ -1.66
NUP88-213ENST00000576862 CACNG4Q9UBN1 327 aa4.66□□□□□ -1.66
NUP88-213ENST00000576862 PADI2Q9Y2J8 665 aa4.66□□□□□ -1.66
NUP88-213ENST00000576862 TRPV2Q9Y5S1 764 aa4.66□□□□□ -1.66
NUP88-213ENST00000576862 NEO1Q92859 1461 aa4.66□□□□□ -1.66
NUP88-213ENST00000576862 ATP7AQ04656 1500 aa4.66□□□□□ -1.66
NUP88-213ENST00000576862 MYO5CQ9NQX4 1742 aa4.66□□□□□ -1.66
NUP88-213ENST00000576862 ZNF518AQ6AHZ1 1483 aa4.65□□□□□ -1.66
NUP88-213ENST00000576862 A0A1W2PRQ8 180 aa4.65□□□□□ -1.67
NUP88-213ENST00000576862 CYSRT1A8MQ03 144 aa4.65□□□□□ -1.67
NUP88-213ENST00000576862 ZFAND5O76080 213 aa4.65□□□□□ -1.67
NUP88-213ENST00000576862 HMBSP08397 361 aa4.65□□□□□ -1.67
NUP88-213ENST00000576862 IGHV4-31P0DP07 118 aa4.65□□□□□ -1.67
NUP88-213ENST00000576862 IL11P20809 199 aa4.65□□□□□ -1.67
NUP88-213ENST00000576862 CA6P23280 308 aa4.65□□□□□ -1.67
NUP88-213ENST00000576862 PEX19P40855 299 aa4.65□□□□□ -1.67
NUP88-213ENST00000576862 LMAN1P49257 510 aa4.65□□□□□ -1.67
NUP88-213ENST00000576862 PPARDQ03181 441 aa4.65□□□□□ -1.67
NUP88-213ENST00000576862 HSPB3Q12988 150 aa4.65□□□□□ -1.67
NUP88-213ENST00000576862 TAF13Q15543 124 aa4.65□□□□□ -1.67
NUP88-213ENST00000576862 CA9Q16790 459 aa4.65□□□□□ -1.67
NUP88-213ENST00000576862 ALDH1L2Q3SY69 923 aa4.65□□□□□ -1.67
NUP88-213ENST00000576862 C1QTNF12Q5T7M4 302 aa4.65□□□□□ -1.67
NUP88-213ENST00000576862 CAMKMTQ7Z624 323 aa4.65□□□□□ -1.67
NUP88-213ENST00000576862 PRPF39Q86UA1 669 aaKnown RBP4.65□□□□□ -1.67
NUP88-213ENST00000576862 TC2NQ8N9U0 490 aa4.65□□□□□ -1.67
NUP88-213ENST00000576862 CCDC107Q8WV48 283 aa4.65□□□□□ -1.67
NUP88-213ENST00000576862 GMPPAQ96IJ6 420 aaPredicted RBP4.65□□□□□ -1.67
NUP88-213ENST00000576862 ART5Q96L15 291 aa4.65□□□□□ -1.67
NUP88-213ENST00000576862 SFXN2Q96NB2 322 aa4.65□□□□□ -1.67
NUP88-213ENST00000576862 RAD9AQ99638 391 aa4.65□□□□□ -1.67
NUP88-213ENST00000576862 WDR13Q9H1Z4 485 aa4.65□□□□□ -1.67
NUP88-213ENST00000576862 MYNNQ9NPC7 610 aa4.65□□□□□ -1.67
NUP88-213ENST00000576862 FGF21Q9NSA1 209 aa4.65□□□□□ -1.67
NUP88-213ENST00000576862 ATAD3AQ9NVI7 634 aa4.65□□□□□ -1.67
NUP88-213ENST00000576862 TAB2Q9NYJ8 693 aa4.65□□□□□ -1.67
NUP88-213ENST00000576862 ABT1Q9ULW3 272 aaKnown RBP4.65□□□□□ -1.67
NUP88-213ENST00000576862 UNC13BO14795 1591 aa4.65□□□□□ -1.67
NUP88-213ENST00000576862 INO80Q9ULG1 1556 aaPredicted RBP4.65□□□□□ -1.67
NUP88-213ENST00000576862 MLH3Q9UHC1 1453 aa4.64□□□□□ -1.67
NUP88-213ENST00000576862 A0A087WW49 117 aa4.64□□□□□ -1.67
NUP88-213ENST00000576862 A0A1W2PPQ1 181 aa4.64□□□□□ -1.67
NUP88-213ENST00000576862 TCRBV21S2A2A0A5A6 115 aa4.64□□□□□ -1.67
NUP88-213ENST00000576862 MSGN1A6NI15 193 aa4.64□□□□□ -1.67
NUP88-213ENST00000576862 IPO8O15397 1037 aaKnown RBP4.64□□□□□ -1.67
NUP88-213ENST00000576862 SPRY1O43609 319 aaPredicted RBP4.64□□□□□ -1.67
NUP88-213ENST00000576862 KHDRBS3O75525 346 aaKnown RBP4.64□□□□□ -1.67
NUP88-213ENST00000576862 CDC123O75794 336 aaPredicted RBP4.64□□□□□ -1.67
NUP88-213ENST00000576862 PSMD10O75832 226 aa4.64□□□□□ -1.67
NUP88-213ENST00000576862 TRUB2O95900 331 aaKnown RBP4.64□□□□□ -1.67
NUP88-213ENST00000576862 HSPA5P11021 654 aaKnown RBP4.64□□□□□ -1.67
NUP88-213ENST00000576862 CEBPBP17676 345 aa4.64□□□□□ -1.67
NUP88-213ENST00000576862 JAK1P23458 1154 aa4.64□□□□□ -1.67
NUP88-213ENST00000576862 MAGEA11P43364 429 aa4.64□□□□□ -1.67
NUP88-213ENST00000576862 VEGFCP49767 419 aa4.64□□□□□ -1.67
NUP88-213ENST00000576862 CCR3P51677 355 aa4.64□□□□□ -1.67
NUP88-213ENST00000576862 UBXN2AP68543 259 aa4.64□□□□□ -1.67
NUP88-213ENST00000576862 SNTB1Q13884 538 aaKnown RBP4.64□□□□□ -1.67
NUP88-213ENST00000576862 RRS1Q15050 365 aaKnown RBP4.64□□□□□ -1.67
NUP88-213ENST00000576862 UGP2Q16851 508 aa4.64□□□□□ -1.67
NUP88-213ENST00000576862 CFAP58Q5T655 872 aa4.64□□□□□ -1.67
NUP88-213ENST00000576862 C6orf163Q5TEZ5 329 aa4.64□□□□□ -1.67
NUP88-213ENST00000576862 PWWP2BQ6NUJ5 590 aa4.64□□□□□ -1.67
NUP88-213ENST00000576862 ZNF497Q6ZNH5 498 aa4.64□□□□□ -1.67
NUP88-213ENST00000576862 RTN4RL2Q86UN3 420 aa4.64□□□□□ -1.67
NUP88-213ENST00000576862 NUDT13Q86X67 352 aa4.64□□□□□ -1.67
NUP88-213ENST00000576862 EID3Q8N140 333 aa4.64□□□□□ -1.67
NUP88-213ENST00000576862 OR52N5Q8NH56 324 aa4.64□□□□□ -1.67
NUP88-213ENST00000576862 HCAR2Q8TDS4 363 aa4.64□□□□□ -1.67
NUP88-213ENST00000576862 TEKT4Q8WW24 435 aa4.64□□□□□ -1.67
NUP88-213ENST00000576862 RSPH1Q8WYR4 309 aa4.64□□□□□ -1.67
NUP88-213ENST00000576862 SERINC2Q96SA4 455 aa4.64□□□□□ -1.67
NUP88-213ENST00000576862 ALDH8A1Q9H2A2 487 aaPredicted RBP4.64□□□□□ -1.67
NUP88-213ENST00000576862 SPHK1Q9NYA1 384 aa4.64□□□□□ -1.67
NUP88-213ENST00000576862 DDX25Q9UHL0 483 aaKnown RBP4.64□□□□□ -1.67
NUP88-213ENST00000576862 RASAL2Q9UJF2 1139 aa4.64□□□□□ -1.67
NUP88-213ENST00000576862 ODF2LQ9ULJ1 636 aa4.64□□□□□ -1.67
NUP88-213ENST00000576862 KDM5CP41229 1560 aa4.64□□□□□ -1.67
NUP88-213ENST00000576862 CCDC144AA2RUR9 1427 aa4.63□□□□□ -1.67
NUP88-213ENST00000576862 ATP10AO60312 1499 aa4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms