RNA–Protein interactions for RNA: ENST00000575599.5

RPAIN-216, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-216ENST00000575599 SAT1P21673 171 aa12.77□□□□□ -0.37
RPAIN-216ENST00000575599 DLSTP36957 453 aa12.77□□□□□ -0.37
RPAIN-216ENST00000575599 HSD17B3P37058 310 aa12.77□□□□□ -0.37
RPAIN-216ENST00000575599 RGS4P49798 205 aa12.77□□□□□ -0.37
RPAIN-216ENST00000575599 PGGT1BP53609 377 aa12.77□□□□□ -0.37
RPAIN-216ENST00000575599 CYP4F2P78329 520 aa12.77□□□□□ -0.37
RPAIN-216ENST00000575599 TIAL1Q01085 375 aaKnown RBP eCLIP12.77□□□□□ -0.372e-6■■■■□ 23
RPAIN-216ENST00000575599 CBLBQ13191 982 aa12.77□□□□□ -0.37
RPAIN-216ENST00000575599 FASTKQ14296 549 aaKnown RBP12.77□□□□□ -0.37
RPAIN-216ENST00000575599 CASP8Q14790 479 aa12.77□□□□□ -0.37
RPAIN-216ENST00000575599 FAM45BPQ6NSW5 357 aa12.77□□□□□ -0.37
RPAIN-216ENST00000575599 PAQR3Q6TCH7 311 aa12.77□□□□□ -0.37
RPAIN-216ENST00000575599 STRA8Q7Z7C7 330 aa12.77□□□□□ -0.37
RPAIN-216ENST00000575599 FAM45AQ8TCE6 357 aa12.77□□□□□ -0.37
RPAIN-216ENST00000575599 LINGO1Q96FE5 620 aa12.77□□□□□ -0.37
RPAIN-216ENST00000575599 FCRL4Q96PJ5 515 aa12.77□□□□□ -0.37
RPAIN-216ENST00000575599 PKP4Q99569 1192 aa12.77□□□□□ -0.37
RPAIN-216ENST00000575599 TXLNGYQ9BZA5 131 aa12.77□□□□□ -0.37
RPAIN-216ENST00000575599 SLC7A5P2Q9GIP4 190 aa12.77□□□□□ -0.37
RPAIN-216ENST00000575599 TWSG1Q9GZX9 223 aa12.77□□□□□ -0.37
RPAIN-216ENST00000575599 SYTL2Q9HCH5 934 aa12.77□□□□□ -0.37
RPAIN-216ENST00000575599 IRAK4Q9NWZ3 460 aa12.77□□□□□ -0.37
RPAIN-216ENST00000575599 MOCS1Q9NZB8 636 aa12.77□□□□□ -0.37
RPAIN-216ENST00000575599 CROTQ9UKG9 612 aa12.77□□□□□ -0.37
RPAIN-216ENST00000575599 CORO1CQ9ULV4 474 aaPredicted RBP12.77□□□□□ -0.37
RPAIN-216ENST00000575599 EIF3FO00303 357 aaPredicted RBP12.76□□□□□ -0.37
RPAIN-216ENST00000575599 HCRTR1O43613 425 aa12.76□□□□□ -0.37
RPAIN-216ENST00000575599 ZBTB14O43829 449 aa12.76□□□□□ -0.37
RPAIN-216ENST00000575599 MT-ND3P03897 115 aa12.76□□□□□ -0.37
RPAIN-216ENST00000575599 OAS2P29728 719 aaKnown RBP12.76□□□□□ -0.37
RPAIN-216ENST00000575599 STX2P32856 288 aa12.76□□□□□ -0.37
RPAIN-216ENST00000575599 SKIV2L2P42285 1042 aaKnown RBP12.76□□□□□ -0.37
RPAIN-216ENST00000575599 ITGA1P56199 1179 aa12.76□□□□□ -0.37
RPAIN-216ENST00000575599 COL9A2Q14055 689 aaPredicted RBP12.76□□□□□ -0.37
RPAIN-216ENST00000575599 SLC29A2Q14542 456 aa12.76□□□□□ -0.37
RPAIN-216ENST00000575599 CYP2A13Q16696 494 aa12.76□□□□□ -0.37
RPAIN-216ENST00000575599 LRRC8EQ6NSJ5 796 aa12.76□□□□□ -0.37
RPAIN-216ENST00000575599 CYHR1Q6ZMK1 362 aa12.76□□□□□ -0.37
RPAIN-216ENST00000575599 UBE2R2Q712K3 238 aaPredicted RBP12.76□□□□□ -0.37
RPAIN-216ENST00000575599 MYO1HQ8N1T3 1032 aa12.76□□□□□ -0.37
RPAIN-216ENST00000575599 PPFIBP2Q8ND30 876 aa12.76□□□□□ -0.37
RPAIN-216ENST00000575599 UHMK1Q8TAS1 419 aaKnown RBP12.76□□□□□ -0.37
RPAIN-216ENST00000575599 EEF1AKMT1Q8WVE0 214 aa12.76□□□□□ -0.37
RPAIN-216ENST00000575599 SNRNP27Q8WVK2 155 aaKnown RBP12.76□□□□□ -0.37
RPAIN-216ENST00000575599 ASB11Q8WXH4 323 aa12.76□□□□□ -0.37
RPAIN-216ENST00000575599 CDKL2Q92772 493 aa12.76□□□□□ -0.37
RPAIN-216ENST00000575599 CLIP3Q96DZ5 547 aa12.76□□□□□ -0.37
RPAIN-216ENST00000575599 OLFM1Q99784 485 aa12.76□□□□□ -0.37
RPAIN-216ENST00000575599 MIPEPQ99797 713 aa12.76□□□□□ -0.37
RPAIN-216ENST00000575599 ACAT2Q9BWD1 397 aa12.76□□□□□ -0.37
RPAIN-216ENST00000575599 LRRC4CQ9HCJ2 640 aa12.76□□□□□ -0.37
RPAIN-216ENST00000575599 LHX9Q9NQ69 397 aa12.76□□□□□ -0.37
RPAIN-216ENST00000575599 SMYD2Q9NRG4 433 aa12.76□□□□□ -0.37
RPAIN-216ENST00000575599 ABCF3Q9NUQ8 709 aa12.76□□□□□ -0.37
RPAIN-216ENST00000575599 INTS7Q9NVH2 962 aaKnown RBP12.76□□□□□ -0.37
RPAIN-216ENST00000575599 IL17BQ9UHF5 180 aa12.76□□□□□ -0.37
RPAIN-216ENST00000575599 SERTAD3Q9UJW9 196 aa12.76□□□□□ -0.37
RPAIN-216ENST00000575599 PADI1Q9ULC6 663 aa12.76□□□□□ -0.37
RPAIN-216ENST00000575599 MRPS18BQ9Y676 258 aaKnown RBP12.76□□□□□ -0.37
RPAIN-216ENST00000575599 LOC400499M0QZD8 3231 aa12.75□□□□□ -0.37
RPAIN-216ENST00000575599 FAM95CA0A1B0GW59 222 aa12.75□□□□□ -0.37
RPAIN-216ENST00000575599 A0A1W2PPV9 198 aa12.75□□□□□ -0.37
RPAIN-216ENST00000575599 E7EQ34 232 aa12.75□□□□□ -0.37
RPAIN-216ENST00000575599 SLC16A8O95907 504 aa12.75□□□□□ -0.37
RPAIN-216ENST00000575599 MSL3P1P0C860 447 aa12.75□□□□□ -0.37
RPAIN-216ENST00000575599 FDXRP22570 491 aa12.75□□□□□ -0.37
RPAIN-216ENST00000575599 RPA3P35244 121 aaPredicted RBP12.75□□□□□ -0.37
RPAIN-216ENST00000575599 PNLIPRP1P54315 467 aa12.75□□□□□ -0.37
RPAIN-216ENST00000575599 RHDQ02161 417 aa12.75□□□□□ -0.37
RPAIN-216ENST00000575599 GPS2Q13227 327 aa12.75□□□□□ -0.37
RPAIN-216ENST00000575599 SUSD1Q6UWL2 747 aa12.75□□□□□ -0.37
RPAIN-216ENST00000575599 SLC26A11Q86WA9 606 aa12.75□□□□□ -0.37
RPAIN-216ENST00000575599 ZC3HC1Q86WB0 502 aaKnown RBP12.75□□□□□ -0.37
RPAIN-216ENST00000575599 SYTL1Q8IYJ3 562 aa12.75□□□□□ -0.37
RPAIN-216ENST00000575599 GPR135Q8IZ08 494 aa12.75□□□□□ -0.37
RPAIN-216ENST00000575599 OR2L3Q8NG85 312 aa12.75□□□□□ -0.37
RPAIN-216ENST00000575599 HMGCLL1Q8TB92 370 aa12.75□□□□□ -0.37
RPAIN-216ENST00000575599 CT55Q8WUE5 264 aa12.75□□□□□ -0.37
RPAIN-216ENST00000575599 SMPDL3AQ92484 453 aa12.75□□□□□ -0.37
RPAIN-216ENST00000575599 STARD8Q92502 1023 aa12.75□□□□□ -0.37
RPAIN-216ENST00000575599 MR1Q95460 341 aa12.75□□□□□ -0.37
RPAIN-216ENST00000575599 UBL7Q96S82 380 aaPredicted RBP12.75□□□□□ -0.37
RPAIN-216ENST00000575599 EFHD1Q9BUP0 239 aa12.75□□□□□ -0.37
RPAIN-216ENST00000575599 ACTR5Q9H9F9 607 aaPredicted RBP12.75□□□□□ -0.37
RPAIN-216ENST00000575599 NSMCE4AQ9NXX6 385 aa12.75□□□□□ -0.37
RPAIN-216ENST00000575599 ADAMTS6Q9UKP5 1117 aa12.75□□□□□ -0.37
RPAIN-216ENST00000575599 PLAAQ9Y263 795 aa12.75□□□□□ -0.37
RPAIN-216ENST00000575599 VWA7Q9Y334 891 aa12.75□□□□□ -0.37
RPAIN-216ENST00000575599 PCDHB3Q9Y5E6 796 aa12.75□□□□□ -0.37
RPAIN-216ENST00000575599 IKBKGQ9Y6K9 419 aa12.75□□□□□ -0.37
RPAIN-216ENST00000575599 TCRBV9S1A1TA0A576 114 aa12.74□□□□□ -0.37
RPAIN-216ENST00000575599 ZNF839A8K0R7 811 aa12.74□□□□□ -0.37
RPAIN-216ENST00000575599 ZNF891A8MT65 544 aaPredicted RBP12.74□□□□□ -0.37
RPAIN-216ENST00000575599 GFYI3L273 518 aa12.74□□□□□ -0.37
RPAIN-216ENST00000575599 ZNF749O43361 778 aa12.74□□□□□ -0.37
RPAIN-216ENST00000575599 PRICKLE3O43900 615 aaPredicted RBP12.74□□□□□ -0.37
RPAIN-216ENST00000575599 KATNA1O75449 491 aa12.74□□□□□ -0.37
RPAIN-216ENST00000575599 OR2B3O76000 313 aa12.74□□□□□ -0.37
RPAIN-216ENST00000575599 C8GP07360 202 aa12.74□□□□□ -0.37
RPAIN-216ENST00000575599 CTSBP07858 339 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms