RNA–Protein interactions for RNA: ENST00000575515.1

NDC80-204, Transcript of NDC80, kinetochore complex component, humanhuman

TSL 5

Gene NDC80, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDC80-204ENST00000575515 FAM47EQ6ZV65 393 aa9.74□□□□□ -0.85
NDC80-204ENST00000575515 GALNT7Q86SF2 657 aa9.74□□□□□ -0.85
NDC80-204ENST00000575515 SYVN1Q86TM6 617 aa9.74□□□□□ -0.85
NDC80-204ENST00000575515 PPP1R3BQ86XI6 285 aa9.74□□□□□ -0.85
NDC80-204ENST00000575515 NUDCD3Q8IVD9 361 aa9.74□□□□□ -0.85
NDC80-204ENST00000575515 SREK1Q8WXA9 508 aaKnown RBP9.74□□□□□ -0.85
NDC80-204ENST00000575515 SNRNP40Q96DI7 357 aaKnown RBP9.74□□□□□ -0.85
NDC80-204ENST00000575515 TSPAN17Q96FV3 270 aa9.74□□□□□ -0.85
NDC80-204ENST00000575515 TGM7Q96PF1 710 aa9.74□□□□□ -0.85
NDC80-204ENST00000575515 MANSC1Q9H8J5 431 aa9.74□□□□□ -0.85
NDC80-204ENST00000575515 CAB39LQ9H9S4 337 aa9.74□□□□□ -0.85
NDC80-204ENST00000575515 FBXO6Q9NRD1 293 aaPredicted RBP9.74□□□□□ -0.85
NDC80-204ENST00000575515 CATSPERZQ9NTU4 200 aa9.74□□□□□ -0.85
NDC80-204ENST00000575515 NLE1Q9NVX2 485 aaPredicted RBP9.74□□□□□ -0.85
NDC80-204ENST00000575515 ZNHIT2Q9UHR6 403 aa9.74□□□□□ -0.85
NDC80-204ENST00000575515 ITGB1BP2Q9UKP3 347 aa9.74□□□□□ -0.85
NDC80-204ENST00000575515 RPL26L1Q9UNX3 145 aaKnown RBP9.74□□□□□ -0.85
NDC80-204ENST00000575515 SPO11Q9Y5K1 396 aa9.74□□□□□ -0.85
NDC80-204ENST00000575515 CSMD1Q96PZ7 3565 aa9.74□□□□□ -0.85
NDC80-204ENST00000575515 A0A087X1B8 175 aa9.73□□□□□ -0.85
NDC80-204ENST00000575515 CCDC162PA2VCL2 907 aa9.73□□□□□ -0.85
NDC80-204ENST00000575515 A6NL46 340 aa9.73□□□□□ -0.85
NDC80-204ENST00000575515 CCL22O00626 93 aa9.73□□□□□ -0.85
NDC80-204ENST00000575515 PFDN6O15212 129 aa9.73□□□□□ -0.85
NDC80-204ENST00000575515 BIRC5O15392 142 aa9.73□□□□□ -0.85
NDC80-204ENST00000575515 CD3EAPO15446 510 aaKnown RBP9.73□□□□□ -0.85
NDC80-204ENST00000575515 SNX2O60749 519 aa9.73□□□□□ -0.85
NDC80-204ENST00000575515 PRLP01236 227 aa9.73□□□□□ -0.85
NDC80-204ENST00000575515 AHSGP02765 367 aa9.73□□□□□ -0.85
NDC80-204ENST00000575515 C2P06681 752 aa9.73□□□□□ -0.85
NDC80-204ENST00000575515 APOA4P06727 396 aa9.73□□□□□ -0.85
NDC80-204ENST00000575515 PDHA1P08559 390 aa9.73□□□□□ -0.85
NDC80-204ENST00000575515 TROVE2P10155 538 aaKnown RBP eCLIP9.73□□□□□ -0.85
NDC80-204ENST00000575515 CYP2A6P11509 494 aaPredicted RBP9.73□□□□□ -0.85
NDC80-204ENST00000575515 STMN1P16949 149 aa9.73□□□□□ -0.85
NDC80-204ENST00000575515 BGNP21810 368 aa9.73□□□□□ -0.85
NDC80-204ENST00000575515 PTPN4P29074 926 aa9.73□□□□□ -0.85
NDC80-204ENST00000575515 CRABP2P29373 138 aa9.73□□□□□ -0.85
NDC80-204ENST00000575515 VIPR1P32241 457 aa9.73□□□□□ -0.85
NDC80-204ENST00000575515 ITGA1P56199 1179 aa9.73□□□□□ -0.85
NDC80-204ENST00000575515 RAB10P61026 200 aa9.73□□□□□ -0.85
NDC80-204ENST00000575515 POU4F1Q01851 419 aa9.73□□□□□ -0.85
NDC80-204ENST00000575515 IL10RAQ13651 578 aa9.73□□□□□ -0.85
NDC80-204ENST00000575515 ITIH4Q14624 930 aa9.73□□□□□ -0.85
NDC80-204ENST00000575515 KRTAP21-3Q3LHN1 58 aa9.73□□□□□ -0.85
NDC80-204ENST00000575515 CYB5D1Q6P9G0 228 aa9.73□□□□□ -0.85
NDC80-204ENST00000575515 Q6ZVL8 140 aa9.73□□□□□ -0.85
NDC80-204ENST00000575515 CHST15Q7LFX5 561 aaPredicted RBP9.73□□□□□ -0.85
NDC80-204ENST00000575515 SPATA21Q7Z572 469 aa9.73□□□□□ -0.85
NDC80-204ENST00000575515 HSD11B1LQ7Z5J1 315 aa9.73□□□□□ -0.85
NDC80-204ENST00000575515 CCDC91Q7Z6B0 441 aa9.73□□□□□ -0.85
NDC80-204ENST00000575515 LCA5Q86VQ0 697 aa9.73□□□□□ -0.85
NDC80-204ENST00000575515 HPS6Q86YV9 775 aa9.73□□□□□ -0.85
NDC80-204ENST00000575515 CILP2Q8IUL8 1156 aa9.73□□□□□ -0.85
NDC80-204ENST00000575515 CISD2Q8N5K1 135 aaKnown RBP9.73□□□□□ -0.85
NDC80-204ENST00000575515 RBMXL3Q8N7X1 1067 aaKnown RBP9.73□□□□□ -0.85
NDC80-204ENST00000575515 FDCSPQ8NFU4 85 aa9.73□□□□□ -0.85
NDC80-204ENST00000575515 OR4K2Q8NGD2 314 aa9.73□□□□□ -0.85
NDC80-204ENST00000575515 OR13C4Q8NGS5 318 aa9.73□□□□□ -0.85
NDC80-204ENST00000575515 OR4L1Q8NH43 312 aa9.73□□□□□ -0.85
NDC80-204ENST00000575515 TBRG4Q969Z0 631 aaKnown RBP eCLIP9.73□□□□□ -0.85
NDC80-204ENST00000575515 SCARF2Q96GP6 870 aaPredicted RBP9.73□□□□□ -0.85
NDC80-204ENST00000575515 SCYL1Q96KG9 808 aa9.73□□□□□ -0.85
NDC80-204ENST00000575515 NSMCE3Q96MG7 304 aa9.73□□□□□ -0.85
NDC80-204ENST00000575515 TSSK1BQ9BXA7 367 aa9.73□□□□□ -0.85
NDC80-204ENST00000575515 GPR63Q9BZJ6 419 aa9.73□□□□□ -0.85
NDC80-204ENST00000575515 TBC1D29Q9UFV1 150 aa9.73□□□□□ -0.85
NDC80-204ENST00000575515 CD84Q9UIB8 345 aa9.73□□□□□ -0.85
NDC80-204ENST00000575515 KCNK6Q9Y257 313 aa9.73□□□□□ -0.85
NDC80-204ENST00000575515 PKP3Q9Y446 797 aa9.73□□□□□ -0.85
NDC80-204ENST00000575515 ZNF711Q9Y462 761 aa9.73□□□□□ -0.85
NDC80-204ENST00000575515 PRKAB1Q9Y478 270 aa9.73□□□□□ -0.85
NDC80-204ENST00000575515 PDZD2O15018 2839 aa9.73□□□□□ -0.85
NDC80-204ENST00000575515 OR51F1A6NGY5 319 aa9.72□□□□□ -0.85
NDC80-204ENST00000575515 LILRA5A6NI73 299 aa9.72□□□□□ -0.85
NDC80-204ENST00000575515 PRSS44E7EML9 344 aa9.72□□□□□ -0.85
NDC80-204ENST00000575515 TRAFD1O14545 582 aaPredicted RBP9.72□□□□□ -0.85
NDC80-204ENST00000575515 PHGDHO43175 533 aaKnown RBP9.72□□□□□ -0.85
NDC80-204ENST00000575515 PLIN3O60664 434 aa9.72□□□□□ -0.85
NDC80-204ENST00000575515 EDF1O60869 148 aaKnown RBP9.72□□□□□ -0.85
NDC80-204ENST00000575515 HAUS5O94927 633 aa9.72□□□□□ -0.85
NDC80-204ENST00000575515 TIAF1O95411 115 aa9.72□□□□□ -0.85
NDC80-204ENST00000575515 C9P02748 559 aa9.72□□□□□ -0.85
NDC80-204ENST00000575515 PROCP04070 461 aa9.72□□□□□ -0.85
NDC80-204ENST00000575515 BPGMP07738 259 aa9.72□□□□□ -0.85
NDC80-204ENST00000575515 FGF5P12034 268 aa9.72□□□□□ -0.85
NDC80-204ENST00000575515 COL6A2P12110 1019 aa9.72□□□□□ -0.85
NDC80-204ENST00000575515 TYRP1P17643 537 aa9.72□□□□□ -0.85
NDC80-204ENST00000575515 AMD1P17707 334 aa9.72□□□□□ -0.85
NDC80-204ENST00000575515 CTPS1P17812 591 aa9.72□□□□□ -0.85
NDC80-204ENST00000575515 TEAD1P28347 426 aa9.72□□□□□ -0.85
NDC80-204ENST00000575515 GABRB3P28472 473 aa9.72□□□□□ -0.85
NDC80-204ENST00000575515 HNRNPH2P55795 449 aaKnown RBP9.72□□□□□ -0.85
NDC80-204ENST00000575515 SF3A3Q12874 501 aaKnown RBP eCLIP9.72□□□□□ -0.85
NDC80-204ENST00000575515 PTPRCAPQ14761 206 aa9.72□□□□□ -0.85
NDC80-204ENST00000575515 CHI3L2Q15782 390 aa9.72□□□□□ -0.85
NDC80-204ENST00000575515 TSNAXIP1Q2TAA8 658 aa9.72□□□□□ -0.85
NDC80-204ENST00000575515 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.72□□□□□ -0.85
NDC80-204ENST00000575515 SP5Q6BEB4 398 aaPredicted RBP9.72□□□□□ -0.85
NDC80-204ENST00000575515 FAM45BPQ6NSW5 357 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms