RNA–Protein interactions for RNA: ENST00000575112.5

RPAIN-215, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 3,817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-215ENST00000575112 ACTL8Q9H568 366 aa8.32□□□□□ -1.08
RPAIN-215ENST00000575112 INTS10Q9NVR2 710 aaKnown RBP8.32□□□□□ -1.08
RPAIN-215ENST00000575112 PDE10AQ9Y233 779 aa8.32□□□□□ -1.08
RPAIN-215ENST00000575112 A0A1W2PP18 115 aa8.31□□□□□ -1.08
RPAIN-215ENST00000575112 TBX1O43435 398 aa8.31□□□□□ -1.08
RPAIN-215ENST00000575112 TPST2O60704 377 aa8.31□□□□□ -1.08
RPAIN-215ENST00000575112 KERAO60938 352 aa8.31□□□□□ -1.08
RPAIN-215ENST00000575112 UGT2B11O75310 529 aa8.31□□□□□ -1.08
RPAIN-215ENST00000575112 FADS2O95864 444 aaKnown RBP8.31□□□□□ -1.08
RPAIN-215ENST00000575112 IGSF6O95976 241 aa8.31□□□□□ -1.08
RPAIN-215ENST00000575112 HOXD8P13378 290 aaPredicted RBP8.31□□□□□ -1.08
RPAIN-215ENST00000575112 MSH3P20585 1137 aa8.31□□□□□ -1.08
RPAIN-215ENST00000575112 DAG1Q14118 895 aa8.31□□□□□ -1.08
RPAIN-215ENST00000575112 DMC1Q14565 340 aa8.31□□□□□ -1.08
RPAIN-215ENST00000575112 PCBP2Q15366 365 aaKnown RBP eCLIP8.31□□□□□ -1.08
RPAIN-215ENST00000575112 TAF1AQ15573 450 aaPredicted RBP8.31□□□□□ -1.08
RPAIN-215ENST00000575112 TMC5Q6UXY8 1006 aa8.31□□□□□ -1.08
RPAIN-215ENST00000575112 THAP5Q7Z6K1 395 aa8.31□□□□□ -1.08
RPAIN-215ENST00000575112 HORMAD1Q86X24 394 aa8.31□□□□□ -1.08
RPAIN-215ENST00000575112 TMEM25Q86YD3 366 aa8.31□□□□□ -1.08
RPAIN-215ENST00000575112 PACRGLQ8N7B6 248 aa8.31□□□□□ -1.08
RPAIN-215ENST00000575112 FAR1Q8WVX9 515 aa8.31□□□□□ -1.08
RPAIN-215ENST00000575112 KIAA1191Q96A73 305 aa8.31□□□□□ -1.08
RPAIN-215ENST00000575112 SLC39A13Q96H72 371 aa8.31□□□□□ -1.08
RPAIN-215ENST00000575112 PPP1R2P1Q96PQ5 205 aa8.31□□□□□ -1.08
RPAIN-215ENST00000575112 NDEL1Q9GZM8 345 aa8.31□□□□□ -1.08
RPAIN-215ENST00000575112 GPN2Q9H9Y4 310 aaPredicted RBP8.31□□□□□ -1.08
RPAIN-215ENST00000575112 LRTM1Q9HBL6 345 aa8.31□□□□□ -1.08
RPAIN-215ENST00000575112 ZBTB20Q9HC78 741 aaPredicted RBP8.31□□□□□ -1.08
RPAIN-215ENST00000575112 EXOSC4Q9NPD3 245 aaKnown RBP8.31□□□□□ -1.08
RPAIN-215ENST00000575112 CD320Q9NPF0 282 aa8.31□□□□□ -1.08
RPAIN-215ENST00000575112 ZNF236Q9UL36 1845 aa8.31□□□□□ -1.08
RPAIN-215ENST00000575112 MGAT4DA6NG13 374 aa8.31□□□□□ -1.08
RPAIN-215ENST00000575112 SLC1A7O00341 560 aa8.31□□□□□ -1.08
RPAIN-215ENST00000575112 SYN3O14994 580 aa8.31□□□□□ -1.08
RPAIN-215ENST00000575112 LATO43561 262 aa8.31□□□□□ -1.08
RPAIN-215ENST00000575112 TBC1D4O60343 1298 aa8.31□□□□□ -1.08
RPAIN-215ENST00000575112 CYP11A1P05108 521 aa8.31□□□□□ -1.08
RPAIN-215ENST00000575112 LCKP06239 509 aa8.31□□□□□ -1.08
RPAIN-215ENST00000575112 C8AP07357 584 aa8.31□□□□□ -1.08
RPAIN-215ENST00000575112 ANXA5P08758 320 aa8.31□□□□□ -1.08
RPAIN-215ENST00000575112 SLC10A3P09131 477 aa8.31□□□□□ -1.08
RPAIN-215ENST00000575112 ALDH3A2P51648 485 aa8.31□□□□□ -1.08
RPAIN-215ENST00000575112 CRISP3P54108 245 aa8.31□□□□□ -1.08
RPAIN-215ENST00000575112 ARF5P84085 180 aa8.31□□□□□ -1.08
RPAIN-215ENST00000575112 CHIT1Q13231 466 aa8.31□□□□□ -1.08
RPAIN-215ENST00000575112 TP53BP2Q13625 1128 aa8.31□□□□□ -1.08
RPAIN-215ENST00000575112 RCAN2Q14206 197 aa8.31□□□□□ -1.08
RPAIN-215ENST00000575112 TTLL9Q3SXZ7 439 aa8.31□□□□□ -1.08
RPAIN-215ENST00000575112 ATP13A5Q4VNC0 1218 aa8.31□□□□□ -1.08
RPAIN-215ENST00000575112 DLEU7Q6UYE1 221 aa8.31□□□□□ -1.08
RPAIN-215ENST00000575112 DPY19L3Q6ZPD9 716 aa8.31□□□□□ -1.08
RPAIN-215ENST00000575112 ANKRD13BQ86YJ7 626 aa8.31□□□□□ -1.08
RPAIN-215ENST00000575112 C7orf57Q8NEG2 295 aa8.31□□□□□ -1.08
RPAIN-215ENST00000575112 BDH2Q9BUT1 245 aa8.31□□□□□ -1.08
RPAIN-215ENST00000575112 ATAD3AQ9NVI7 634 aa8.31□□□□□ -1.08
RPAIN-215ENST00000575112 MARCH5Q9NX47 278 aa8.31□□□□□ -1.08
RPAIN-215ENST00000575112 ENPP5Q9UJA9 477 aa8.31□□□□□ -1.08
RPAIN-215ENST00000575112 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP8.31□□□□□ -1.08
RPAIN-215ENST00000575112 MED16Q9Y2X0 877 aa8.31□□□□□ -1.08
RPAIN-215ENST00000575112 G3V2T6 193 aa8.31□□□□□ -1.08
RPAIN-215ENST00000575112 RFXANKO14593 260 aa8.31□□□□□ -1.08
RPAIN-215ENST00000575112 TPD52L2O43399 206 aaKnown RBP8.31□□□□□ -1.08
RPAIN-215ENST00000575112 UROSP10746 265 aa8.31□□□□□ -1.08
RPAIN-215ENST00000575112 DGKAP23743 735 aa8.31□□□□□ -1.08
RPAIN-215ENST00000575112 CA5AP35218 305 aa8.31□□□□□ -1.08
RPAIN-215ENST00000575112 NOGQ13253 232 aa8.31□□□□□ -1.08
RPAIN-215ENST00000575112 PTCHD3Q3KNS1 767 aa8.31□□□□□ -1.08
RPAIN-215ENST00000575112 AASDHQ4L235 1098 aaPredicted RBP8.31□□□□□ -1.08
RPAIN-215ENST00000575112 PRSS36Q5K4E3 855 aa8.31□□□□□ -1.08
RPAIN-215ENST00000575112 COLEC12Q5KU26 742 aa8.31□□□□□ -1.08
RPAIN-215ENST00000575112 ATAD3BQ5T9A4 648 aa8.31□□□□□ -1.08
RPAIN-215ENST00000575112 KANK2Q63ZY3 851 aa8.31□□□□□ -1.08
RPAIN-215ENST00000575112 HACD2Q6Y1H2 254 aa8.31□□□□□ -1.08
RPAIN-215ENST00000575112 LRRC49Q8IUZ0 686 aa8.31□□□□□ -1.08
RPAIN-215ENST00000575112 C8orf59Q8N0T1 100 aaPredicted RBP8.31□□□□□ -1.08
RPAIN-215ENST00000575112 NLGN4XQ8N0W4 816 aa8.31□□□□□ -1.08
RPAIN-215ENST00000575112 CELF2-AS1Q8N7Q2 184 aa8.31□□□□□ -1.08
RPAIN-215ENST00000575112 ZNF461Q8TAF7 563 aa8.31□□□□□ -1.08
RPAIN-215ENST00000575112 ZNF296Q8WUU4 475 aaPredicted RBP8.31□□□□□ -1.08
RPAIN-215ENST00000575112 PTCD2Q8WV60 388 aaKnown RBP8.31□□□□□ -1.08
RPAIN-215ENST00000575112 TCEAL4Q96EI5 215 aa8.31□□□□□ -1.08
RPAIN-215ENST00000575112 CLSTN3Q9BQT9 956 aa8.31□□□□□ -1.08
RPAIN-215ENST00000575112 TP63Q9H3D4 680 aaPredicted RBP8.31□□□□□ -1.08
RPAIN-215ENST00000575112 ZNF639Q9UID6 485 aa8.31□□□□□ -1.08
RPAIN-215ENST00000575112 CCL26Q9Y258 94 aa8.31□□□□□ -1.08
RPAIN-215ENST00000575112 TNS1Q9HBL0 1735 aaKnown RBP8.31□□□□□ -1.08
RPAIN-215ENST00000575112 LOC100506127A0A0U1RQW1 187 aa8.3□□□□□ -1.08
RPAIN-215ENST00000575112 WASH3PC4AMC7 463 aa8.3□□□□□ -1.08
RPAIN-215ENST00000575112 KPNA4O00629 521 aaPredicted RBP8.3□□□□□ -1.08
RPAIN-215ENST00000575112 TEX28O15482 410 aa8.3□□□□□ -1.08
RPAIN-215ENST00000575112 RGS14O43566 566 aa8.3□□□□□ -1.08
RPAIN-215ENST00000575112 NDUFS2O75306 463 aa8.3□□□□□ -1.08
RPAIN-215ENST00000575112 SERPINA1P01009 418 aa8.3□□□□□ -1.08
RPAIN-215ENST00000575112 KRT6AP02538 564 aa8.3□□□□□ -1.08
RPAIN-215ENST00000575112 KRT6BP04259 564 aa8.3□□□□□ -1.08
RPAIN-215ENST00000575112 FDXRP22570 491 aa8.3□□□□□ -1.08
RPAIN-215ENST00000575112 ETV3P41162 512 aa8.3□□□□□ -1.08
RPAIN-215ENST00000575112 KRT6CP48668 564 aa8.3□□□□□ -1.08
RPAIN-215ENST00000575112 PRIM2P49643 509 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms