RNA–Protein interactions for RNA: ENST00000574428.5

ATPAF1-213, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 1 (best) BASIC

Gene ATPAF1, Length 1,760 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-213ENST00000574428 ACAT2Q9BWD1 397 aa23.25■■□□□ 1.31
ATPAF1-213ENST00000574428 SH2B3Q9UQQ2 575 aa23.25■■□□□ 1.31
ATPAF1-213ENST00000574428 A0A1W2PPV9 198 aa23.24■■□□□ 1.31
ATPAF1-213ENST00000574428 CER1O95813 267 aa23.24■■□□□ 1.31
ATPAF1-213ENST00000574428 OTCP00480 354 aa23.24■■□□□ 1.31
ATPAF1-213ENST00000574428 PSMB5P28074 263 aa23.24■■□□□ 1.31
ATPAF1-213ENST00000574428 RPL14P50914 215 aaKnown RBP23.24■■□□□ 1.31
ATPAF1-213ENST00000574428 C6orf132Q5T0Z8 1188 aa23.24■■□□□ 1.31
ATPAF1-213ENST00000574428 PRAMEF13Q5VWM6 474 aa23.24■■□□□ 1.31
ATPAF1-213ENST00000574428 CLEC6AQ6EIG7 209 aa23.24■■□□□ 1.31
ATPAF1-213ENST00000574428 LETMD1Q6P1Q0 360 aa23.24■■□□□ 1.31
ATPAF1-213ENST00000574428 OR4F6Q8NGB9 312 aa23.24■■□□□ 1.31
ATPAF1-213ENST00000574428 HMGCLL1Q8TB92 370 aa23.24■■□□□ 1.31
ATPAF1-213ENST00000574428 ZFPM2Q8WW38 1151 aa23.24■■□□□ 1.31
ATPAF1-213ENST00000574428 SH3KBP1Q96B97 665 aa23.24■■□□□ 1.31
ATPAF1-213ENST00000574428 KCNA7Q96RP8 456 aa23.24■■□□□ 1.31
ATPAF1-213ENST00000574428 ELAC2Q9BQ52 826 aaKnown RBP23.24■■□□□ 1.31
ATPAF1-213ENST00000574428 SRMSQ9H3Y6 488 aa23.24■■□□□ 1.31
ATPAF1-213ENST00000574428 EPB41L3Q9Y2J2 1087 aaPredicted RBP23.24■■□□□ 1.31
ATPAF1-213ENST00000574428 GIPC1O14908 333 aa23.24■■□□□ 1.31
ATPAF1-213ENST00000574428 KHNYNO15037 678 aaKnown RBP23.24■■□□□ 1.31
ATPAF1-213ENST00000574428 OR4F21O95013 312 aa23.24■■□□□ 1.31
ATPAF1-213ENST00000574428 ESRRBO95718 433 aa23.24■■□□□ 1.31
ATPAF1-213ENST00000574428 NPPBP16860 134 aa23.24■■□□□ 1.31
ATPAF1-213ENST00000574428 ENGP17813 658 aa23.24■■□□□ 1.31
ATPAF1-213ENST00000574428 CCND1P24385 295 aa23.24■■□□□ 1.31
ATPAF1-213ENST00000574428 CCT8P50990 548 aa23.24■■□□□ 1.31
ATPAF1-213ENST00000574428 FOXA1P55317 472 aa23.24■■□□□ 1.31
ATPAF1-213ENST00000574428 PKNOX1P55347 436 aa23.24■■□□□ 1.31
ATPAF1-213ENST00000574428 PLA2G2CQ5R387 149 aa23.24■■□□□ 1.31
ATPAF1-213ENST00000574428 CHCHD2P9Q5T1J5 151 aaPredicted RBP23.24■■□□□ 1.31
ATPAF1-213ENST00000574428 TMEM26Q6ZUK4 368 aa23.24■■□□□ 1.31
ATPAF1-213ENST00000574428 C17orf82Q86X59 251 aaPredicted RBP23.24■■□□□ 1.31
ATPAF1-213ENST00000574428 GPR156Q8NFN8 814 aa23.24■■□□□ 1.31
ATPAF1-213ENST00000574428 TAC3Q9UHF0 121 aa23.24■■□□□ 1.31
ATPAF1-213ENST00000574428 E7EQ34 232 aa23.23■■□□□ 1.31
ATPAF1-213ENST00000574428 PPM1DO15297 605 aa23.23■■□□□ 1.31
ATPAF1-213ENST00000574428 YKT6O15498 198 aa23.23■■□□□ 1.31
ATPAF1-213ENST00000574428 FASLGP48023 281 aa23.23■■□□□ 1.31
ATPAF1-213ENST00000574428 C14orf28Q4W4Y0 310 aa23.23■■□□□ 1.31
ATPAF1-213ENST00000574428 RFWD2Q8NHY2 731 aa23.23■■□□□ 1.31
ATPAF1-213ENST00000574428 NEIL2Q969S2 332 aa23.23■■□□□ 1.31
ATPAF1-213ENST00000574428 STN1Q9H668 368 aaKnown RBP23.23■■□□□ 1.31
ATPAF1-213ENST00000574428 ACTR8Q9H981 624 aa23.23■■□□□ 1.31
ATPAF1-213ENST00000574428 SPHK1Q9NYA1 384 aa23.23■■□□□ 1.31
ATPAF1-213ENST00000574428 OR6C2Q9NZP2 312 aa23.23■■□□□ 1.31
ATPAF1-213ENST00000574428 STK38LQ9Y2H1 464 aa23.23■■□□□ 1.31
ATPAF1-213ENST00000574428 TRAF6Q9Y4K3 522 aa23.23■■□□□ 1.31
ATPAF1-213ENST00000574428 KCNE2Q9Y6J6 123 aa23.23■■□□□ 1.31
ATPAF1-213ENST00000574428 PRAMEF4O60810 478 aa23.22■■□□□ 1.31
ATPAF1-213ENST00000574428 TROVE2P10155 538 aaKnown RBP eCLIP23.22■■□□□ 1.314e-8■■■■■ 72
ATPAF1-213ENST00000574428 YBX1P67809 324 aaKnown RBP23.22■■□□□ 1.31
ATPAF1-213ENST00000574428 BIRC2Q13490 618 aa23.22■■□□□ 1.31
ATPAF1-213ENST00000574428 PRAMEF9Q5VWM5 478 aa23.22■■□□□ 1.31
ATPAF1-213ENST00000574428 MILR1Q7Z6M3 343 aa23.22■■□□□ 1.31
ATPAF1-213ENST00000574428 MYLK4Q86YV6 388 aaPredicted RBP23.22■■□□□ 1.31
ATPAF1-213ENST00000574428 RBM12BQ8IXT5 1001 aaKnown RBP23.22■■□□□ 1.31
ATPAF1-213ENST00000574428 ARL10Q8N8L6 244 aa23.22■■□□□ 1.31
ATPAF1-213ENST00000574428 CDYL2Q8N8U2 506 aa23.22■■□□□ 1.31
ATPAF1-213ENST00000574428 AVL9Q8NBF6 648 aa23.22■■□□□ 1.31
ATPAF1-213ENST00000574428 PRR11Q96HE9 360 aaPredicted RBP23.22■■□□□ 1.31
ATPAF1-213ENST00000574428 MIPEPQ99797 713 aa23.22■■□□□ 1.31
ATPAF1-213ENST00000574428 TBC1D10AQ9BXI6 508 aa23.22■■□□□ 1.31
ATPAF1-213ENST00000574428 TRIM55Q9BYV6 548 aa23.22■■□□□ 1.31
ATPAF1-213ENST00000574428 NLGN3Q9NZ94 848 aa23.22■■□□□ 1.31
ATPAF1-213ENST00000574428 DCTN4Q9UJW0 460 aa23.22■■□□□ 1.31
ATPAF1-213ENST00000574428 RNF11Q9Y3C5 154 aa23.22■■□□□ 1.31
ATPAF1-213ENST00000574428 DYRK1BQ9Y463 629 aa23.22■■□□□ 1.31
ATPAF1-213ENST00000574428 CACNA1HO95180 2353 aa23.22■■□□□ 1.31
ATPAF1-213ENST00000574428 BTN3A3O00478 584 aa23.22■■□□□ 1.31
ATPAF1-213ENST00000574428 CRCPO75575 148 aa23.22■■□□□ 1.31
ATPAF1-213ENST00000574428 TGDSO95455 350 aa23.22■■□□□ 1.31
ATPAF1-213ENST00000574428 CHRM5P08912 532 aaPredicted RBP23.22■■□□□ 1.31
ATPAF1-213ENST00000574428 PEBP1P30086 187 aaKnown RBP23.22■■□□□ 1.31
ATPAF1-213ENST00000574428 LCTLQ6UWM7 567 aa23.22■■□□□ 1.31
ATPAF1-213ENST00000574428 SLC35F3Q8IY50 421 aa23.22■■□□□ 1.31
ATPAF1-213ENST00000574428 ADGRF3Q8IZF5 1079 aa23.22■■□□□ 1.31
ATPAF1-213ENST00000574428 SUMF1Q8NBK3 374 aa23.22■■□□□ 1.31
ATPAF1-213ENST00000574428 PRRX2Q99811 253 aa23.22■■□□□ 1.31
ATPAF1-213ENST00000574428 NTMT1Q9BV86 223 aa23.22■■□□□ 1.31
ATPAF1-213ENST00000574428 CUL9Q8IWT3 2517 aa23.21■■□□□ 1.31
ATPAF1-213ENST00000574428 GPR179Q6PRD1 2367 aa23.21■■□□□ 1.31
ATPAF1-213ENST00000574428 OR6C74A6NCV1 312 aa23.21■■□□□ 1.31
ATPAF1-213ENST00000574428 TRIM38O00635 465 aa23.21■■□□□ 1.31
ATPAF1-213ENST00000574428 AZIN1O14977 448 aa23.21■■□□□ 1.31
ATPAF1-213ENST00000574428 MYF5P13349 255 aa23.21■■□□□ 1.31
ATPAF1-213ENST00000574428 GNAZP19086 355 aa23.21■■□□□ 1.31
ATPAF1-213ENST00000574428 SERPINB3P29508 390 aa23.21■■□□□ 1.31
ATPAF1-213ENST00000574428 CHIT1Q13231 466 aa23.21■■□□□ 1.31
ATPAF1-213ENST00000574428 C6orf89Q6UWU4 347 aa23.21■■□□□ 1.31
ATPAF1-213ENST00000574428 MAVSQ7Z434 540 aa23.21■■□□□ 1.31
ATPAF1-213ENST00000574428 SPATA21Q7Z572 469 aa23.21■■□□□ 1.31
ATPAF1-213ENST00000574428 MINDY1Q8N5J2 469 aa23.21■■□□□ 1.31
ATPAF1-213ENST00000574428 CCDC197Q8NCU1 140 aa23.21■■□□□ 1.31
ATPAF1-213ENST00000574428 OR10G6Q8NH81 332 aa23.21■■□□□ 1.31
ATPAF1-213ENST00000574428 SETD7Q8WTS6 366 aaKnown RBP23.21■■□□□ 1.31
ATPAF1-213ENST00000574428 GRAMD1AQ96CP6 724 aa23.21■■□□□ 1.31
ATPAF1-213ENST00000574428 HAUS8Q9BT25 410 aa23.21■■□□□ 1.31
ATPAF1-213ENST00000574428 GPRC5BQ9NZH0 403 aa23.21■■□□□ 1.31
ATPAF1-213ENST00000574428 TIMM22Q9Y584 194 aa23.21■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms