RNA–Protein interactions for RNA: ENST00000572778.5

CHMP6-204, Transcript of charged multivesicular body protein 6, humanhuman

TSL 2

Gene CHMP6, Length 737 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6-204ENST00000572778 GRIA3P42263 894 aa19.88■□□□□ 0.77
CHMP6-204ENST00000572778 GABRA4P48169 554 aa19.88■□□□□ 0.77
CHMP6-204ENST00000572778 GPS2Q13227 327 aa19.88■□□□□ 0.77
CHMP6-204ENST00000572778 TAF1BQ53T94 588 aaPredicted RBP19.88■□□□□ 0.77
CHMP6-204ENST00000572778 FCRL6Q6DN72 434 aa19.88■□□□□ 0.77
CHMP6-204ENST00000572778 MCOLN3Q8TDD5 553 aa19.88■□□□□ 0.77
CHMP6-204ENST00000572778 ZNF480Q8WV37 535 aa19.88■□□□□ 0.77
CHMP6-204ENST00000572778 EURLQ9NYK6 297 aa19.88■□□□□ 0.77
CHMP6-204ENST00000572778 TXNDC16Q9P2K2 825 aa19.88■□□□□ 0.77
CHMP6-204ENST00000572778 MRPS18BQ9Y676 258 aaKnown RBP19.88■□□□□ 0.77
CHMP6-204ENST00000572778 TCRBV9S1A1TA0A576 114 aa19.87■□□□□ 0.77
CHMP6-204ENST00000572778 CXorf49A8MYA2 514 aaPredicted RBP19.87■□□□□ 0.77
CHMP6-204ENST00000572778 ERVH48-1M5A8F1 160 aa19.87■□□□□ 0.77
CHMP6-204ENST00000572778 NKX2-8O15522 239 aa19.87■□□□□ 0.77
CHMP6-204ENST00000572778 GSTA2P09210 222 aa19.87■□□□□ 0.77
CHMP6-204ENST00000572778 CMPK1P30085 196 aa19.87■□□□□ 0.77
CHMP6-204ENST00000572778 GPX6P59796 221 aa19.87■□□□□ 0.77
CHMP6-204ENST00000572778 DNASE1L3Q13609 305 aa19.87■□□□□ 0.77
CHMP6-204ENST00000572778 C16orf46Q6P387 395 aa19.87■□□□□ 0.77
CHMP6-204ENST00000572778 MCATQ8IVS2 390 aaKnown RBP19.87■□□□□ 0.77
CHMP6-204ENST00000572778 STARD8Q92502 1023 aa19.87■□□□□ 0.77
CHMP6-204ENST00000572778 SEC14L1Q92503 715 aa19.87■□□□□ 0.77
CHMP6-204ENST00000572778 DLG3Q92796 817 aa19.87■□□□□ 0.77
CHMP6-204ENST00000572778 ZUFSPQ96AP4 578 aa19.87■□□□□ 0.77
CHMP6-204ENST00000572778 RHOJQ9H4E5 214 aa19.87■□□□□ 0.77
CHMP6-204ENST00000572778 KCND3Q9UK17 655 aa19.87■□□□□ 0.77
CHMP6-204ENST00000572778 PDE10AQ9Y233 779 aa19.87■□□□□ 0.77
CHMP6-204ENST00000572778 TARM1B6A8C7 271 aa19.86■□□□□ 0.77
CHMP6-204ENST00000572778 E7ENX8 843 aa19.86■□□□□ 0.77
CHMP6-204ENST00000572778 MEN1O00255 615 aa19.86■□□□□ 0.77
CHMP6-204ENST00000572778 SLC16A5O15375 505 aa19.86■□□□□ 0.77
CHMP6-204ENST00000572778 CTSBP07858 339 aa19.86■□□□□ 0.77
CHMP6-204ENST00000572778 HBQ1P09105 142 aa19.86■□□□□ 0.77
CHMP6-204ENST00000572778 PRKAR1AP10644 381 aa19.86■□□□□ 0.77
CHMP6-204ENST00000572778 YBX1P67809 324 aaKnown RBP19.86■□□□□ 0.77
CHMP6-204ENST00000572778 TAP2Q03519 686 aa19.86■□□□□ 0.77
CHMP6-204ENST00000572778 SP140Q13342 867 aa19.86■□□□□ 0.77
CHMP6-204ENST00000572778 COL9A2Q14055 689 aaPredicted RBP19.86■□□□□ 0.77
CHMP6-204ENST00000572778 SOWAHCQ53LP3 525 aaPredicted RBP19.86■□□□□ 0.77
CHMP6-204ENST00000572778 ZC3H12BQ5HYM0 836 aaKnown RBP19.86■□□□□ 0.77
CHMP6-204ENST00000572778 THEMIS2Q5TEJ8 643 aa19.86■□□□□ 0.77
CHMP6-204ENST00000572778 CYS1Q717R9 158 aa19.86■□□□□ 0.77
CHMP6-204ENST00000572778 CTAGE3PQ8IX95 158 aa19.86■□□□□ 0.77
CHMP6-204ENST00000572778 DSELQ8IZU8 1212 aa19.86■□□□□ 0.77
CHMP6-204ENST00000572778 CCDC138Q96M89 665 aa19.86■□□□□ 0.77
CHMP6-204ENST00000572778 BBC3Q96PG8 261 aaPredicted RBP19.86■□□□□ 0.77
CHMP6-204ENST00000572778 PARVBQ9HBI1 364 aa19.86■□□□□ 0.77
CHMP6-204ENST00000572778 LRRC4CQ9HCJ2 640 aa19.86■□□□□ 0.77
CHMP6-204ENST00000572778 MRPS30Q9NP92 439 aaKnown RBP19.86■□□□□ 0.77
CHMP6-204ENST00000572778 ZDHHC18Q9NUE0 388 aa19.86■□□□□ 0.77
CHMP6-204ENST00000572778 PCMTD2Q9NV79 361 aa19.86■□□□□ 0.77
CHMP6-204ENST00000572778 TAC3Q9UHF0 121 aa19.86■□□□□ 0.77
CHMP6-204ENST00000572778 DMGDHQ9UI17 866 aaKnown RBP19.86■□□□□ 0.77
CHMP6-204ENST00000572778 AP1M2Q9Y6Q5 423 aa19.86■□□□□ 0.77
CHMP6-204ENST00000572778 CHD6Q8TD26 2715 aa19.85■□□□□ 0.77
CHMP6-204ENST00000572778 PABPN1LA6NDY0 278 aaKnown RBP19.85■□□□□ 0.77
CHMP6-204ENST00000572778 FAM159BA6NKW6 160 aa19.85■□□□□ 0.77
CHMP6-204ENST00000572778 C21orf140B9A014 251 aa19.85■□□□□ 0.77
CHMP6-204ENST00000572778 TERTO14746 1132 aaKnown RBP19.85■□□□□ 0.77
CHMP6-204ENST00000572778 ZSCAN9O15535 394 aaPredicted RBP19.85■□□□□ 0.77
CHMP6-204ENST00000572778 TSPAN12O95859 305 aa19.85■□□□□ 0.77
CHMP6-204ENST00000572778 HIST1H2AGP0C0S8 130 aaPredicted RBP19.85■□□□□ 0.77
CHMP6-204ENST00000572778 HIST1H2ADP20671 130 aa19.85■□□□□ 0.77
CHMP6-204ENST00000572778 IMPA1P29218 277 aa19.85■□□□□ 0.77
CHMP6-204ENST00000572778 SLC12A2P55011 1212 aa19.85■□□□□ 0.77
CHMP6-204ENST00000572778 TAS2R39P59534 338 aa19.85■□□□□ 0.77
CHMP6-204ENST00000572778 MC1RQ01726 317 aa19.85■□□□□ 0.77
CHMP6-204ENST00000572778 PTCHD3Q3KNS1 767 aa19.85■□□□□ 0.77
CHMP6-204ENST00000572778 GLE1Q53GS7 698 aaKnown RBP19.85■□□□□ 0.77
CHMP6-204ENST00000572778 TLDC1Q6P9B6 456 aa19.85■□□□□ 0.77
CHMP6-204ENST00000572778 ZNF655Q8N720 491 aaPredicted RBP19.85■□□□□ 0.77
CHMP6-204ENST00000572778 CEP112Q8N8E3 955 aa19.85■□□□□ 0.77
CHMP6-204ENST00000572778 TTC9Q92623 222 aa19.85■□□□□ 0.77
CHMP6-204ENST00000572778 EXTL1Q92935 676 aa19.85■□□□□ 0.77
CHMP6-204ENST00000572778 VPS39Q96JC1 886 aa19.85■□□□□ 0.77
CHMP6-204ENST00000572778 HIST1H2AHQ96KK5 128 aa19.85■□□□□ 0.77
CHMP6-204ENST00000572778 LRFN5Q96NI6 719 aa19.85■□□□□ 0.77
CHMP6-204ENST00000572778 RUFY1Q96T51 708 aa19.85■□□□□ 0.77
CHMP6-204ENST00000572778 CPNE1Q99829 537 aa19.85■□□□□ 0.77
CHMP6-204ENST00000572778 HIST1H2AJQ99878 128 aa19.85■□□□□ 0.77
CHMP6-204ENST00000572778 H2AFJQ9BTM1 129 aa19.85■□□□□ 0.77
CHMP6-204ENST00000572778 DPH7Q9BTV6 452 aa19.85■□□□□ 0.77
CHMP6-204ENST00000572778 CHST8Q9H2A9 424 aa19.85■□□□□ 0.77
CHMP6-204ENST00000572778 H3BMH7 237 aa19.84■□□□□ 0.77
CHMP6-204ENST00000572778 ATXN7O15265 892 aaPredicted RBP19.84■□□□□ 0.77
CHMP6-204ENST00000572778 CCNDBP1O95273 360 aa19.84■□□□□ 0.77
CHMP6-204ENST00000572778 ATXN8OSP0DMR3 200 aa19.84■□□□□ 0.77
CHMP6-204ENST00000572778 RORAP35398 523 aa19.84■□□□□ 0.77
CHMP6-204ENST00000572778 RPS15P62841 145 aaKnown RBP19.84■□□□□ 0.77
CHMP6-204ENST00000572778 PRDX1Q06830 199 aaKnown RBP19.84■□□□□ 0.77
CHMP6-204ENST00000572778 ILF2Q12905 390 aaKnown RBP19.84■□□□□ 0.77
CHMP6-204ENST00000572778 ZNF460Q14592 562 aa19.84■□□□□ 0.77
CHMP6-204ENST00000572778 NAA25Q14CX7 972 aa19.84■□□□□ 0.77
CHMP6-204ENST00000572778 ICE2Q659A1 982 aa19.84■□□□□ 0.77
CHMP6-204ENST00000572778 LCN10Q6JVE6 187 aa19.84■□□□□ 0.77
CHMP6-204ENST00000572778 TMEM207Q6UWW9 146 aa19.84■□□□□ 0.77
CHMP6-204ENST00000572778 MBOAT1Q6ZNC8 495 aa19.84■□□□□ 0.77
CHMP6-204ENST00000572778 FBF1Q8TES7 1133 aa19.84■□□□□ 0.77
CHMP6-204ENST00000572778 IFT81Q8WYA0 676 aa19.84■□□□□ 0.77
CHMP6-204ENST00000572778 NDC1Q9BTX1 674 aa19.84■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms