RNA–Protein interactions for RNA: ENST00000571558.5

RPAIN-209, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,423 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-209ENST00000571558 C16orf46Q6P387 395 aa13.34□□□□□ -0.27
RPAIN-209ENST00000571558 TAF8Q7Z7C8 310 aa13.34□□□□□ -0.27
RPAIN-209ENST00000571558 KIAA1191Q96A73 305 aa13.34□□□□□ -0.27
RPAIN-209ENST00000571558 SLC45A3Q96JT2 553 aa13.34□□□□□ -0.27
RPAIN-209ENST00000571558 EFHD1Q9BUP0 239 aa13.34□□□□□ -0.27
RPAIN-209ENST00000571558 UNKQ9C0B0 810 aaKnown RBP13.34□□□□□ -0.27
RPAIN-209ENST00000571558 OR52A5Q9H2C5 316 aa13.34□□□□□ -0.27
RPAIN-209ENST00000571558 SEMA6CQ9H3T2 930 aa13.34□□□□□ -0.27
RPAIN-209ENST00000571558 DPEP2Q9H4A9 486 aa13.34□□□□□ -0.27
RPAIN-209ENST00000571558 NMRAL1Q9HBL8 299 aa13.34□□□□□ -0.27
RPAIN-209ENST00000571558 KLC4Q9NSK0 619 aa13.34□□□□□ -0.27
RPAIN-209ENST00000571558 SLC17A7Q9P2U7 560 aa13.34□□□□□ -0.27
RPAIN-209ENST00000571558 FAM8A1Q9UBU6 413 aa13.34□□□□□ -0.27
RPAIN-209ENST00000571558 BLACEA4D250 179 aa13.33□□□□□ -0.28
RPAIN-209ENST00000571558 CDC7O00311 574 aa13.33□□□□□ -0.28
RPAIN-209ENST00000571558 TM9SF1O15321 606 aa13.33□□□□□ -0.28
RPAIN-209ENST00000571558 PLIN3O60664 434 aa13.33□□□□□ -0.28
RPAIN-209ENST00000571558 TFEBP19484 476 aa13.33□□□□□ -0.28
RPAIN-209ENST00000571558 ACADLP28330 430 aa13.33□□□□□ -0.28
RPAIN-209ENST00000571558 OAS2P29728 719 aaKnown RBP13.33□□□□□ -0.28
RPAIN-209ENST00000571558 GLRBP48167 497 aa13.33□□□□□ -0.28
RPAIN-209ENST00000571558 KCNC1P48547 511 aa13.33□□□□□ -0.28
RPAIN-209ENST00000571558 PPP2R2AP63151 447 aa13.33□□□□□ -0.28
RPAIN-209ENST00000571558 NR1D2Q14995 579 aa13.33□□□□□ -0.28
RPAIN-209ENST00000571558 PPP1R3AQ16821 1122 aa13.33□□□□□ -0.28
RPAIN-209ENST00000571558 CRTC2Q53ET0 693 aaPredicted RBP13.33□□□□□ -0.28
RPAIN-209ENST00000571558 AGBL5Q8NDL9 886 aa13.33□□□□□ -0.28
RPAIN-209ENST00000571558 CCL4L1Q8NHW4 92 aa13.33□□□□□ -0.28
RPAIN-209ENST00000571558 RHEBL1Q8TAI7 183 aa13.33□□□□□ -0.28
RPAIN-209ENST00000571558 ASB11Q8WXH4 323 aa13.33□□□□□ -0.28
RPAIN-209ENST00000571558 DPYSL5Q9BPU6 564 aa13.33□□□□□ -0.28
RPAIN-209ENST00000571558 TFB2MQ9H5Q4 396 aaKnown RBP13.33□□□□□ -0.28
RPAIN-209ENST00000571558 KCNK9Q9NPC2 374 aa13.33□□□□□ -0.28
RPAIN-209ENST00000571558 ACSL5Q9ULC5 683 aa13.33□□□□□ -0.28
RPAIN-209ENST00000571558 KCNK6Q9Y257 313 aa13.33□□□□□ -0.28
RPAIN-209ENST00000571558 DNAJC16Q9Y2G8 782 aa13.33□□□□□ -0.28
RPAIN-209ENST00000571558 CCDC189A1A4V9 331 aa13.32□□□□□ -0.28
RPAIN-209ENST00000571558 A6NCN8 305 aa13.32□□□□□ -0.28
RPAIN-209ENST00000571558 NPEPPSL1A6NEC2 478 aa13.32□□□□□ -0.28
RPAIN-209ENST00000571558 GFYI3L273 518 aa13.32□□□□□ -0.28
RPAIN-209ENST00000571558 BTN3A1O00481 513 aa13.32□□□□□ -0.28
RPAIN-209ENST00000571558 ZWINTO95229 277 aa13.32□□□□□ -0.28
RPAIN-209ENST00000571558 DHRS4L1P0CG22 281 aa13.32□□□□□ -0.28
RPAIN-209ENST00000571558 CCL4P13236 92 aa13.32□□□□□ -0.28
RPAIN-209ENST00000571558 LIFP15018 202 aa13.32□□□□□ -0.28
RPAIN-209ENST00000571558 VCLP18206 1134 aa13.32□□□□□ -0.28
RPAIN-209ENST00000571558 GPR3P46089 330 aa13.32□□□□□ -0.28
RPAIN-209ENST00000571558 WDR4P57081 412 aaKnown RBP13.32□□□□□ -0.28
RPAIN-209ENST00000571558 SQSTM1Q13501 440 aa13.32□□□□□ -0.28
RPAIN-209ENST00000571558 TSNQ15631 228 aaKnown RBP13.32□□□□□ -0.28
RPAIN-209ENST00000571558 CCDC153Q494R4 210 aa13.32□□□□□ -0.28
RPAIN-209ENST00000571558 CAPRIN2Q6IMN6 1127 aaKnown RBP13.32□□□□□ -0.28
RPAIN-209ENST00000571558 KLC3Q6P597 504 aa13.32□□□□□ -0.28
RPAIN-209ENST00000571558 SBSNQ6UWP8 590 aa13.32□□□□□ -0.28
RPAIN-209ENST00000571558 TMPRSS9Q7Z410 1059 aa13.32□□□□□ -0.28
RPAIN-209ENST00000571558 ZNF438Q7Z4V0 828 aa13.32□□□□□ -0.28
RPAIN-209ENST00000571558 CACNA2D3Q8IZS8 1091 aa13.32□□□□□ -0.28
RPAIN-209ENST00000571558 MYO1HQ8N1T3 1032 aa13.32□□□□□ -0.28
RPAIN-209ENST00000571558 APOBEC4Q8WW27 367 aaKnown RBP13.32□□□□□ -0.28
RPAIN-209ENST00000571558 DLG3Q92796 817 aa13.32□□□□□ -0.28
RPAIN-209ENST00000571558 MIB2Q96AX9 1013 aa13.32□□□□□ -0.28
RPAIN-209ENST00000571558 FAM111AQ96PZ2 611 aa13.32□□□□□ -0.28
RPAIN-209ENST00000571558 TEFMQ96QE5 360 aaKnown RBP13.32□□□□□ -0.28
RPAIN-209ENST00000571558 ATOH8Q96SQ7 321 aa13.32□□□□□ -0.28
RPAIN-209ENST00000571558 MRPL57Q9BQC6 102 aaKnown RBP13.32□□□□□ -0.28
RPAIN-209ENST00000571558 MRPL46Q9H2W6 279 aaKnown RBP13.32□□□□□ -0.28
RPAIN-209ENST00000571558 ALG9Q9H6U8 611 aa13.32□□□□□ -0.28
RPAIN-209ENST00000571558 ADAMTS6Q9UKP5 1117 aa13.32□□□□□ -0.28
RPAIN-209ENST00000571558 CREBBPQ92793 2442 aa13.32□□□□□ -0.28
RPAIN-209ENST00000571558 G3V2L1 256 aa13.31□□□□□ -0.28
RPAIN-209ENST00000571558 B4GAT1O43505 415 aa13.31□□□□□ -0.28
RPAIN-209ENST00000571558 PSIP1O75475 530 aaKnown RBP13.31□□□□□ -0.28
RPAIN-209ENST00000571558 FGF3P11487 239 aaPredicted RBP13.31□□□□□ -0.28
RPAIN-209ENST00000571558 AK4P27144 223 aaPredicted RBP13.31□□□□□ -0.28
RPAIN-209ENST00000571558 KPNA2P52292 529 aaKnown RBP13.31□□□□□ -0.28
RPAIN-209ENST00000571558 RAB15P59190 212 aa13.31□□□□□ -0.28
RPAIN-209ENST00000571558 MC1RQ01726 317 aa13.31□□□□□ -0.28
RPAIN-209ENST00000571558 KLRB1Q12918 225 aa13.31□□□□□ -0.28
RPAIN-209ENST00000571558 WASH2PQ6VEQ5 465 aa13.31□□□□□ -0.28
RPAIN-209ENST00000571558 ADAMTSL2Q86TH1 951 aa13.31□□□□□ -0.28
RPAIN-209ENST00000571558 C17orf82Q86X59 251 aaPredicted RBP13.31□□□□□ -0.28
RPAIN-209ENST00000571558 JPH3Q8WXH2 748 aaPredicted RBP13.31□□□□□ -0.28
RPAIN-209ENST00000571558 KIAA1143Q96AT1 154 aaPredicted RBP13.31□□□□□ -0.28
RPAIN-209ENST00000571558 RMDN2Q96LZ7 410 aa13.31□□□□□ -0.28
RPAIN-209ENST00000571558 TSNARE1Q96NA8 513 aa13.31□□□□□ -0.28
RPAIN-209ENST00000571558 SELENOSQ9BQE4 189 aa13.31□□□□□ -0.28
RPAIN-209ENST00000571558 IQCGQ9H095 443 aaKnown RBP13.31□□□□□ -0.28
RPAIN-209ENST00000571558 WWP1Q9H0M0 922 aa13.31□□□□□ -0.28
RPAIN-209ENST00000571558 RDH14Q9HBH5 336 aa13.31□□□□□ -0.28
RPAIN-209ENST00000571558 WASH6PQ9NQA3 447 aa13.31□□□□□ -0.28
RPAIN-209ENST00000571558 CPSF2Q9P2I0 782 aaKnown RBP13.31□□□□□ -0.28
RPAIN-209ENST00000571558 XPR1Q9UBH6 696 aa13.31□□□□□ -0.28
RPAIN-209ENST00000571558 TBC1D29Q9UFV1 150 aa13.31□□□□□ -0.28
RPAIN-209ENST00000571558 TSR3Q9UJK0 312 aaKnown RBP13.31□□□□□ -0.28
RPAIN-209ENST00000571558 WDR37Q9Y2I8 494 aa13.31□□□□□ -0.28
RPAIN-209ENST00000571558 IGHV5-10-1A0A0J9YXX1 117 aa13.3□□□□□ -0.28
RPAIN-209ENST00000571558 B4E171 279 aa13.3□□□□□ -0.28
RPAIN-209ENST00000571558 KERAO60938 352 aa13.3□□□□□ -0.28
RPAIN-209ENST00000571558 EML2O95834 649 aa13.3□□□□□ -0.28
RPAIN-209ENST00000571558 C8GP07360 202 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms