RNA–Protein interactions for RNA: ENST00000570475.5

USP43-202, Transcript of ubiquitin specific peptidase 43, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP43, Length 3,500 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-202ENST00000570475 UPK1AO00322 258 aa14.92□□□□□ -0.02
USP43-202ENST00000570475 AIREO43918 545 aa14.92□□□□□ -0.02
USP43-202ENST00000570475 SEC14L2O76054 403 aa14.92□□□□□ -0.02
USP43-202ENST00000570475 C7P10643 843 aa14.92□□□□□ -0.02
USP43-202ENST00000570475 C21orf33P30042 268 aaPredicted RBP14.92□□□□□ -0.02
USP43-202ENST00000570475 GRIK2Q13002 908 aa14.92□□□□□ -0.02
USP43-202ENST00000570475 TRIM60Q495X7 471 aa14.92□□□□□ -0.02
USP43-202ENST00000570475 TMCO2Q7Z6W1 182 aaPredicted RBP14.92□□□□□ -0.02
USP43-202ENST00000570475 GOLM1Q8NBJ4 401 aa14.92□□□□□ -0.02
USP43-202ENST00000570475 COPS4Q9BT78 406 aa14.92□□□□□ -0.02
USP43-202ENST00000570475 ACPTQ9BZG2 426 aa14.92□□□□□ -0.02
USP43-202ENST00000570475 SMG9Q9H0W8 520 aaKnown RBP14.92□□□□□ -0.02
USP43-202ENST00000570475 HEBP1Q9NRV9 189 aa14.92□□□□□ -0.02
USP43-202ENST00000570475 NINQ8N4C6 2090 aa14.92□□□□□ -0.02
USP43-202ENST00000570475 FAM92AA1XBS5 289 aa14.91□□□□□ -0.02
USP43-202ENST00000570475 ZNF701M0R085 212 aaPredicted RBP14.91□□□□□ -0.02
USP43-202ENST00000570475 KPNA5O15131 536 aa14.91□□□□□ -0.02
USP43-202ENST00000570475 CNOT3O75175 753 aaKnown RBP14.91□□□□□ -0.02
USP43-202ENST00000570475 NUDT7P0C024 238 aa14.91□□□□□ -0.02
USP43-202ENST00000570475 CD97P48960 835 aa14.91□□□□□ -0.02
USP43-202ENST00000570475 NAE1Q13564 534 aa14.91□□□□□ -0.02
USP43-202ENST00000570475 SOWAHCQ53LP3 525 aaPredicted RBP14.91□□□□□ -0.02
USP43-202ENST00000570475 C6orf183Q5T699 404 aa14.91□□□□□ -0.02
USP43-202ENST00000570475 OR5AK3PQ8NH89 298 aa14.91□□□□□ -0.02
USP43-202ENST00000570475 TUBA1CQ9BQE3 449 aa14.91□□□□□ -0.02
USP43-202ENST00000570475 HEPHQ9BQS7 1158 aa14.91□□□□□ -0.02
USP43-202ENST00000570475 RHCGQ9UBD6 479 aa14.91□□□□□ -0.02
USP43-202ENST00000570475 DUSP12Q9UNI6 340 aa14.91□□□□□ -0.02
USP43-202ENST00000570475 SAMD4AQ9UPU9 718 aaKnown RBP14.91□□□□□ -0.02
USP43-202ENST00000570475 SLC45A1Q9Y2W3 748 aa14.91□□□□□ -0.02
USP43-202ENST00000570475 TRBC1P01850 177 aa14.91□□□□□ -0.02
USP43-202ENST00000570475 AZGP1P25311 298 aaKnown RBP14.91□□□□□ -0.02
USP43-202ENST00000570475 GP2P55259 537 aaKnown RBP14.91□□□□□ -0.02
USP43-202ENST00000570475 CDH12P55289 794 aa14.91□□□□□ -0.02
USP43-202ENST00000570475 GANABQ14697 944 aaKnown RBP14.91□□□□□ -0.02
USP43-202ENST00000570475 HKDC1Q2TB90 917 aa14.91□□□□□ -0.02
USP43-202ENST00000570475 ADPRMQ3LIE5 342 aa14.91□□□□□ -0.02
USP43-202ENST00000570475 NIPAL1Q6NVV3 410 aa14.91□□□□□ -0.02
USP43-202ENST00000570475 CERS6Q6ZMG9 384 aa14.91□□□□□ -0.02
USP43-202ENST00000570475 ALDH16A1Q8IZ83 802 aa14.91□□□□□ -0.02
USP43-202ENST00000570475 NELL1Q92832 810 aa14.91□□□□□ -0.02
USP43-202ENST00000570475 SCAMP4Q969E2 229 aa14.91□□□□□ -0.02
USP43-202ENST00000570475 SLC22A12Q96S37 553 aa14.91□□□□□ -0.02
USP43-202ENST00000570475 ACAT2Q9BWD1 397 aa14.91□□□□□ -0.02
USP43-202ENST00000570475 WDR12Q9GZL7 423 aaKnown RBP14.91□□□□□ -0.02
USP43-202ENST00000570475 DCSTAMPQ9H295 470 aa14.91□□□□□ -0.02
USP43-202ENST00000570475 SLC52A3Q9NQ40 469 aa14.91□□□□□ -0.02
USP43-202ENST00000570475 PAK1IP1Q9NWT1 392 aaPredicted RBP14.91□□□□□ -0.02
USP43-202ENST00000570475 FAM32AQ9Y421 112 aaKnown RBP14.91□□□□□ -0.02
USP43-202ENST00000570475 CPQQ9Y646 472 aa14.91□□□□□ -0.02
USP43-202ENST00000570475 MIA3Q5JRA6 1907 aa14.91□□□□□ -0.02
USP43-202ENST00000570475 H7C4K7 107 aa14.91□□□□□ -0.02
USP43-202ENST00000570475 PQBP1O60828 265 aaKnown RBP14.91□□□□□ -0.02
USP43-202ENST00000570475 ADAM23O75077 832 aa14.91□□□□□ -0.02
USP43-202ENST00000570475 WISP3O95389 354 aaPredicted RBP14.91□□□□□ -0.02
USP43-202ENST00000570475 DNTTP04053 509 aa14.91□□□□□ -0.02
USP43-202ENST00000570475 ZFP36L2P47974 494 aaKnown RBP14.91□□□□□ -0.02
USP43-202ENST00000570475 CLCA4Q14CN2 919 aa14.91□□□□□ -0.02
USP43-202ENST00000570475 GALNT7Q86SF2 657 aa14.91□□□□□ -0.02
USP43-202ENST00000570475 SLC7A5P1Q8MH63 180 aa14.91□□□□□ -0.02
USP43-202ENST00000570475 PCSK9Q8NBP7 692 aaKnown RBP14.91□□□□□ -0.02
USP43-202ENST00000570475 OR4K1Q8NGD4 311 aa14.91□□□□□ -0.02
USP43-202ENST00000570475 PEX13Q92968 403 aa14.91□□□□□ -0.02
USP43-202ENST00000570475 LGALS12Q96DT0 336 aa14.91□□□□□ -0.02
USP43-202ENST00000570475 ZNF641Q96N77 438 aaPredicted RBP14.91□□□□□ -0.02
USP43-202ENST00000570475 SGIP1Q9BQI5 828 aa14.91□□□□□ -0.02
USP43-202ENST00000570475 C2orf49Q9BVC5 232 aaPredicted RBP14.91□□□□□ -0.02
USP43-202ENST00000570475 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.91□□□□□ -0.02
USP43-202ENST00000570475 DCAF13Q9NV06 445 aaKnown RBP14.91□□□□□ -0.02
USP43-202ENST00000570475 THUMPD1Q9NXG2 353 aaKnown RBP14.91□□□□□ -0.02
USP43-202ENST00000570475 SYN3O14994 580 aa14.9□□□□□ -0.02
USP43-202ENST00000570475 MFN2O95140 757 aa14.9□□□□□ -0.02
USP43-202ENST00000570475 ATXN8OSP0DMR3 200 aa14.9□□□□□ -0.02
USP43-202ENST00000570475 BPIP17213 487 aa14.9□□□□□ -0.02
USP43-202ENST00000570475 RECQLP46063 649 aaPredicted RBP14.9□□□□□ -0.02
USP43-202ENST00000570475 TUFMP49411 452 aaKnown RBP14.9□□□□□ -0.02
USP43-202ENST00000570475 SPIBQ01892 262 aa14.9□□□□□ -0.02
USP43-202ENST00000570475 UBE2J2Q8N2K1 259 aa14.9□□□□□ -0.02
USP43-202ENST00000570475 DPP10Q8N608 796 aa14.9□□□□□ -0.02
USP43-202ENST00000570475 WFDC5Q8TCV5 224 aa14.9□□□□□ -0.02
USP43-202ENST00000570475 RHBDF1Q96CC6 855 aa14.9□□□□□ -0.02
USP43-202ENST00000570475 EID2BQ96D98 161 aa14.9□□□□□ -0.02
USP43-202ENST00000570475 KCNS3Q9BQ31 491 aa14.9□□□□□ -0.02
USP43-202ENST00000570475 ZNF556Q9HAH1 456 aa14.9□□□□□ -0.02
USP43-202ENST00000570475 ZBTB20Q9HC78 741 aaPredicted RBP14.9□□□□□ -0.02
USP43-202ENST00000570475 ZNF840PA6NDX5 716 aa14.9□□□□□ -0.02
USP43-202ENST00000570475 MAGEB17A8MXT2 336 aa14.9□□□□□ -0.02
USP43-202ENST00000570475 UGT2B11O75310 529 aa14.9□□□□□ -0.02
USP43-202ENST00000570475 RRM2P31350 389 aa14.9□□□□□ -0.02
USP43-202ENST00000570475 RPP38P78345 283 aaKnown RBP14.9□□□□□ -0.02
USP43-202ENST00000570475 SLC14A1Q13336 389 aa14.9□□□□□ -0.02
USP43-202ENST00000570475 SNX20Q7Z614 316 aa14.9□□□□□ -0.02
USP43-202ENST00000570475 B3GNT8Q7Z7M8 397 aa14.9□□□□□ -0.02
USP43-202ENST00000570475 SVOPQ8N4V2 548 aa14.9□□□□□ -0.02
USP43-202ENST00000570475 PDFQ9HBH1 243 aa14.9□□□□□ -0.02
USP43-202ENST00000570475 MAP4K5Q9Y4K4 846 aa14.9□□□□□ -0.02
USP43-202ENST00000570475 MYO10Q9HD67 2058 aa14.9□□□□□ -0.02
USP43-202ENST00000570475 SMIM30A4D0T7 59 aa14.89□□□□□ -0.03
USP43-202ENST00000570475 SUV39H1O43463 412 aa14.89□□□□□ -0.03
USP43-202ENST00000570475 PRSS23O95084 383 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms