RNA–Protein interactions for RNA: ENST00000569916.1

CNOT1-220, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-220ENST00000569916 ERV3-1Q14264 604 aa12.52□□□□□ -0.41
CNOT1-220ENST00000569916 ARHGAP19Q14CB8 494 aa12.52□□□□□ -0.41
CNOT1-220ENST00000569916 DEFB109BQ30KR1 87 aa12.52□□□□□ -0.41
CNOT1-220ENST00000569916 DUPD1Q68J44 220 aa12.52□□□□□ -0.41
CNOT1-220ENST00000569916 RHBDD2Q6NTF9 364 aa12.52□□□□□ -0.41
CNOT1-220ENST00000569916 UGT3A1Q6NUS8 523 aa12.52□□□□□ -0.41
CNOT1-220ENST00000569916 FIGLAQ6QHK4 219 aa12.52□□□□□ -0.41
CNOT1-220ENST00000569916 C16orf45Q96MC5 204 aaPredicted RBP12.52□□□□□ -0.41
CNOT1-220ENST00000569916 SLC7A5P2Q9GIP4 190 aa12.52□□□□□ -0.41
CNOT1-220ENST00000569916 EURLQ9NYK6 297 aa12.52□□□□□ -0.41
CNOT1-220ENST00000569916 TAS2R13Q9NYV9 303 aa12.52□□□□□ -0.41
CNOT1-220ENST00000569916 WHRNQ9P202 907 aa12.52□□□□□ -0.41
CNOT1-220ENST00000569916 AP1M2Q9Y6Q5 423 aa12.52□□□□□ -0.41
CNOT1-220ENST00000569916 HEATR5BQ9P2D3 2071 aa12.52□□□□□ -0.41
CNOT1-220ENST00000569916 CFAP46Q8IYW2 2715 aa12.52□□□□□ -0.41
CNOT1-220ENST00000569916 PIEZO2Q9H5I5 2752 aa12.52□□□□□ -0.41
CNOT1-220ENST00000569916 NUP210LQ5VU65 1888 aa12.51□□□□□ -0.41
CNOT1-220ENST00000569916 PCSK5Q92824 1860 aa12.51□□□□□ -0.41
CNOT1-220ENST00000569916 CDC14CA4D256 554 aa12.51□□□□□ -0.41
CNOT1-220ENST00000569916 TARM1B6A8C7 271 aa12.51□□□□□ -0.41
CNOT1-220ENST00000569916 CTSVO60911 334 aa12.51□□□□□ -0.41
CNOT1-220ENST00000569916 SLC16A8O95907 504 aa12.51□□□□□ -0.41
CNOT1-220ENST00000569916 RAB40ALP0C0E4 278 aa12.51□□□□□ -0.41
CNOT1-220ENST00000569916 SKIV2L2P42285 1042 aaKnown RBP12.51□□□□□ -0.41
CNOT1-220ENST00000569916 CCR10P46092 362 aa12.51□□□□□ -0.41
CNOT1-220ENST00000569916 RPS15P62841 145 aaKnown RBP12.51□□□□□ -0.41
CNOT1-220ENST00000569916 MGAT5Q09328 741 aa12.51□□□□□ -0.41
CNOT1-220ENST00000569916 IL10RAQ13651 578 aa12.51□□□□□ -0.41
CNOT1-220ENST00000569916 COL9A2Q14055 689 aaPredicted RBP12.51□□□□□ -0.41
CNOT1-220ENST00000569916 LRRC8EQ6NSJ5 796 aa12.51□□□□□ -0.41
CNOT1-220ENST00000569916 TLDC1Q6P9B6 456 aa12.51□□□□□ -0.41
CNOT1-220ENST00000569916 PAQR3Q6TCH7 311 aa12.51□□□□□ -0.41
CNOT1-220ENST00000569916 SUSD1Q6UWL2 747 aa12.51□□□□□ -0.41
CNOT1-220ENST00000569916 UBE2R2Q712K3 238 aaPredicted RBP12.51□□□□□ -0.41
CNOT1-220ENST00000569916 SYVN1Q86TM6 617 aa12.51□□□□□ -0.41
CNOT1-220ENST00000569916 MCATQ8IVS2 390 aaKnown RBP12.51□□□□□ -0.41
CNOT1-220ENST00000569916 ZBED8Q8IZ13 594 aa12.51□□□□□ -0.41
CNOT1-220ENST00000569916 ZNF655Q8N720 491 aaPredicted RBP12.51□□□□□ -0.41
CNOT1-220ENST00000569916 ENDOVQ8N8Q3 282 aaKnown RBP12.51□□□□□ -0.41
CNOT1-220ENST00000569916 PPFIBP2Q8ND30 876 aa12.51□□□□□ -0.41
CNOT1-220ENST00000569916 ZNF480Q8WV37 535 aa12.51□□□□□ -0.41
CNOT1-220ENST00000569916 EEF1AKMT1Q8WVE0 214 aa12.51□□□□□ -0.41
CNOT1-220ENST00000569916 SMPDL3AQ92484 453 aa12.51□□□□□ -0.41
CNOT1-220ENST00000569916 DLG3Q92796 817 aa12.51□□□□□ -0.41
CNOT1-220ENST00000569916 ZUFSPQ96AP4 578 aa12.51□□□□□ -0.41
CNOT1-220ENST00000569916 GBP5Q96PP8 586 aa12.51□□□□□ -0.41
CNOT1-220ENST00000569916 DPH2Q9BQC3 489 aaPredicted RBP12.51□□□□□ -0.41
CNOT1-220ENST00000569916 NLNQ9BYT8 704 aa12.51□□□□□ -0.41
CNOT1-220ENST00000569916 FAM117AQ9C073 453 aa12.51□□□□□ -0.41
CNOT1-220ENST00000569916 ADNPQ9H2P0 1102 aa12.51□□□□□ -0.41
CNOT1-220ENST00000569916 SLC6A20Q9NP91 592 aa12.51□□□□□ -0.41
CNOT1-220ENST00000569916 GEMIN8Q9NWZ8 242 aaKnown RBP12.51□□□□□ -0.41
CNOT1-220ENST00000569916 MOCS1Q9NZB8 636 aa12.51□□□□□ -0.41
CNOT1-220ENST00000569916 DHCR7Q9UBM7 475 aaKnown RBP12.51□□□□□ -0.41
CNOT1-220ENST00000569916 ADAMTS6Q9UKP5 1117 aa12.51□□□□□ -0.41
CNOT1-220ENST00000569916 CORO1CQ9ULV4 474 aaPredicted RBP12.51□□□□□ -0.41
CNOT1-220ENST00000569916 SRPK3Q9UPE1 567 aa12.51□□□□□ -0.41
CNOT1-220ENST00000569916 POLHQ9Y253 713 aa12.51□□□□□ -0.41
CNOT1-220ENST00000569916 FARSAQ9Y285 508 aaKnown RBP12.51□□□□□ -0.41
CNOT1-220ENST00000569916 PSAT1Q9Y617 370 aa12.51□□□□□ -0.41
CNOT1-220ENST00000569916 CCDC88CQ9P219 2028 aa12.5□□□□□ -0.41
CNOT1-220ENST00000569916 MDC1Q14676 2089 aaKnown RBP12.5□□□□□ -0.41
CNOT1-220ENST00000569916 COL6A6A6NMZ7 2263 aa12.5□□□□□ -0.41
CNOT1-220ENST00000569916 OR2A25A4D2G3 310 aa12.5□□□□□ -0.41
CNOT1-220ENST00000569916 ZNF839A8K0R7 811 aa12.5□□□□□ -0.41
CNOT1-220ENST00000569916 E7ENX8 843 aa12.5□□□□□ -0.41
CNOT1-220ENST00000569916 ZBTB14O43829 449 aa12.5□□□□□ -0.41
CNOT1-220ENST00000569916 TSPAN12O95859 305 aa12.5□□□□□ -0.41
CNOT1-220ENST00000569916 SYF2O95926 243 aaKnown RBP12.5□□□□□ -0.41
CNOT1-220ENST00000569916 FDXRP22570 491 aa12.5□□□□□ -0.41
CNOT1-220ENST00000569916 IMPA1P29218 277 aa12.5□□□□□ -0.41
CNOT1-220ENST00000569916 CMPK1P30085 196 aa12.5□□□□□ -0.41
CNOT1-220ENST00000569916 HSD17B2P37059 387 aa12.5□□□□□ -0.41
CNOT1-220ENST00000569916 RGS4P49798 205 aa12.5□□□□□ -0.41
CNOT1-220ENST00000569916 PGGT1BP53609 377 aa12.5□□□□□ -0.41
CNOT1-220ENST00000569916 NFKB2Q00653 900 aa12.5□□□□□ -0.41
CNOT1-220ENST00000569916 TAP2Q03519 686 aa12.5□□□□□ -0.41
CNOT1-220ENST00000569916 KCNAB2Q13303 367 aa12.5□□□□□ -0.41
CNOT1-220ENST00000569916 NCF4Q15080 339 aa12.5□□□□□ -0.41
CNOT1-220ENST00000569916 UGT8Q16880 541 aa12.5□□□□□ -0.41
CNOT1-220ENST00000569916 ZC3H12BQ5HYM0 836 aaKnown RBP12.5□□□□□ -0.41
CNOT1-220ENST00000569916 HECTD2Q5U5R9 776 aa12.5□□□□□ -0.41
CNOT1-220ENST00000569916 C1orf189Q5VU69 101 aa12.5□□□□□ -0.41
CNOT1-220ENST00000569916 FAM45BPQ6NSW5 357 aa12.5□□□□□ -0.41
CNOT1-220ENST00000569916 RNF44Q7L0R7 432 aa12.5□□□□□ -0.41
CNOT1-220ENST00000569916 LRRC56Q8IYG6 542 aaPredicted RBP12.5□□□□□ -0.41
CNOT1-220ENST00000569916 GPATCH11Q8N954 259 aa12.5□□□□□ -0.41
CNOT1-220ENST00000569916 FAM45AQ8TCE6 357 aa12.5□□□□□ -0.41
CNOT1-220ENST00000569916 PROKR1Q8TCW9 393 aa12.5□□□□□ -0.41
CNOT1-220ENST00000569916 APOBEC4Q8WW27 367 aaKnown RBP12.5□□□□□ -0.41
CNOT1-220ENST00000569916 SEC14L1Q92503 715 aa12.5□□□□□ -0.41
CNOT1-220ENST00000569916 ZNF285Q96NJ3 590 aa12.5□□□□□ -0.41
CNOT1-220ENST00000569916 OLFM1Q99784 485 aa12.5□□□□□ -0.41
CNOT1-220ENST00000569916 ACAT2Q9BWD1 397 aa12.5□□□□□ -0.41
CNOT1-220ENST00000569916 ENAMQ9NRM1 1142 aa12.5□□□□□ -0.41
CNOT1-220ENST00000569916 IRAK4Q9NWZ3 460 aa12.5□□□□□ -0.41
CNOT1-220ENST00000569916 ZFATQ9P243 1243 aa12.5□□□□□ -0.41
CNOT1-220ENST00000569916 TAC3Q9UHF0 121 aa12.5□□□□□ -0.41
CNOT1-220ENST00000569916 TCFL5Q9UL49 500 aa12.5□□□□□ -0.41
CNOT1-220ENST00000569916 KCNMB2Q9Y691 235 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms