RNA–Protein interactions for RNA: ENST00000569487.1

KLHDC4-225, Transcript of kelch domain containing 4, human

TSL 2

Gene KLHDC4, Length 2,072 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KLHDC4-225	ENST00000569487	PLPP6	Q8IY26	295 aa		18.19	■□□□□ 0.5
KLHDC4-225	ENST00000569487	EFHB	Q8N7U6	833 aa		18.19	■□□□□ 0.5
KLHDC4-225	ENST00000569487	DNAJB8	Q8NHS0	232 aa		18.19	■□□□□ 0.5
KLHDC4-225	ENST00000569487	FGF13	Q92913	245 aa		18.19	■□□□□ 0.5
KLHDC4-225	ENST00000569487	SH3YL1	Q96HL8	342 aa	Predicted RBP	18.19	■□□□□ 0.5
KLHDC4-225	ENST00000569487	NODAL	Q96S42	347 aa		18.19	■□□□□ 0.5
KLHDC4-225	ENST00000569487	DPY30	Q9C005	99 aa		18.19	■□□□□ 0.5
KLHDC4-225	ENST00000569487	IKZF5	Q9H5V7	419 aa		18.19	■□□□□ 0.5
KLHDC4-225	ENST00000569487	BPIFA1	Q9NP55	256 aa		18.19	■□□□□ 0.5
KLHDC4-225	ENST00000569487	SLC25A37	Q9NYZ2	338 aa		18.19	■□□□□ 0.5
KLHDC4-225	ENST00000569487	PAIP2B	Q9ULR5	123 aa	Known RBP	18.19	■□□□□ 0.5
KLHDC4-225	ENST00000569487	PCDHGC4	Q9Y5F7	938 aa		18.19	■□□□□ 0.5
KLHDC4-225	ENST00000569487	DOCK8	Q8NF50	2099 aa		18.18	■□□□□ 0.5
KLHDC4-225	ENST00000569487	TRBV5-3	A0A0A0MS03	114 aa		18.18	■□□□□ 0.5
KLHDC4-225	ENST00000569487	CLDN25	C9JDP6	229 aa		18.18	■□□□□ 0.5
KLHDC4-225	ENST00000569487	KPNA4	O00629	521 aa	Predicted RBP	18.18	■□□□□ 0.5
KLHDC4-225	ENST00000569487	PRMT5	O14744	637 aa	Predicted RBP	18.18	■□□□□ 0.5
KLHDC4-225	ENST00000569487	CLDN11	O75508	207 aa		18.18	■□□□□ 0.5
KLHDC4-225	ENST00000569487	PRKD3	O94806	890 aa		18.18	■□□□□ 0.5
KLHDC4-225	ENST00000569487	UGT2B4	P06133	528 aa		18.18	■□□□□ 0.5
KLHDC4-225	ENST00000569487	CDH3	P22223	829 aa		18.18	■□□□□ 0.5
KLHDC4-225	ENST00000569487	IGFBP4	P22692	258 aa		18.18	■□□□□ 0.5
KLHDC4-225	ENST00000569487	MZF1	P28698	734 aa	Predicted RBP	18.18	■□□□□ 0.5
KLHDC4-225	ENST00000569487	PLIN5	Q00G26	463 aa		18.18	■□□□□ 0.5
KLHDC4-225	ENST00000569487	ITGAD	Q13349	1161 aa		18.18	■□□□□ 0.5
KLHDC4-225	ENST00000569487	ADAM15	Q13444	863 aa		18.18	■□□□□ 0.5
KLHDC4-225	ENST00000569487	PON2	Q15165	354 aa		18.18	■□□□□ 0.5
KLHDC4-225	ENST00000569487	PLA2G4E	Q3MJ16	856 aa		18.18	■□□□□ 0.5
KLHDC4-225	ENST00000569487	FAM174B	Q3ZCQ3	159 aa		18.18	■□□□□ 0.5
KLHDC4-225	ENST00000569487	ANKRD54	Q6NXT1	300 aa		18.18	■□□□□ 0.5
KLHDC4-225	ENST00000569487	HIPK1	Q86Z02	1210 aa		18.18	■□□□□ 0.5
KLHDC4-225	ENST00000569487	HS3ST5	Q8IZT8	346 aa		18.18	■□□□□ 0.5
KLHDC4-225	ENST00000569487	ZFYVE19	Q96K21	471 aa		18.18	■□□□□ 0.5
KLHDC4-225	ENST00000569487	NEURL2	Q9BR09	285 aa		18.18	■□□□□ 0.5
KLHDC4-225	ENST00000569487	CLMP	Q9H6B4	373 aa		18.18	■□□□□ 0.5
KLHDC4-225	ENST00000569487	MTCH2	Q9Y6C9	303 aa		18.18	■□□□□ 0.5
KLHDC4-225	ENST00000569487	IQCF5	A8MTL0	148 aa		18.18	■□□□□ 0.5
KLHDC4-225	ENST00000569487	UGT2B11	O75310	529 aa		18.18	■□□□□ 0.5
KLHDC4-225	ENST00000569487	ITGAM	P11215	1152 aa		18.18	■□□□□ 0.5
KLHDC4-225	ENST00000569487	AGXT	P21549	392 aa		18.18	■□□□□ 0.5
KLHDC4-225	ENST00000569487	LTBR	P36941	435 aa		18.18	■□□□□ 0.5
KLHDC4-225	ENST00000569487	OPRL1	P41146	370 aa		18.18	■□□□□ 0.5
KLHDC4-225	ENST00000569487	GP2	P55259	537 aa	Known RBP	18.18	■□□□□ 0.5
KLHDC4-225	ENST00000569487	OCA2	Q04671	838 aa		18.18	■□□□□ 0.5
KLHDC4-225	ENST00000569487	LAPTM5	Q13571	262 aa		18.18	■□□□□ 0.5
KLHDC4-225	ENST00000569487	PTGR1	Q14914	329 aa		18.18	■□□□□ 0.5
KLHDC4-225	ENST00000569487	ACOX1	Q15067	660 aa		18.18	■□□□□ 0.5
KLHDC4-225	ENST00000569487	CTF1	Q16619	201 aa		18.18	■□□□□ 0.5
KLHDC4-225	ENST00000569487	FAM78A	Q5JUQ0	283 aa		18.18	■□□□□ 0.5
KLHDC4-225	ENST00000569487	CACHD1	Q5VU97	1274 aa		18.18	■□□□□ 0.5
KLHDC4-225	ENST00000569487	TRIM46	Q7Z4K8	759 aa		18.18	■□□□□ 0.5
KLHDC4-225	ENST00000569487	ZBTB46	Q86UZ6	589 aa		18.18	■□□□□ 0.5
KLHDC4-225	ENST00000569487	CALHM3	Q86XJ0	350 aa		18.18	■□□□□ 0.5
KLHDC4-225	ENST00000569487	PIK3C3	Q8NEB9	887 aa		18.18	■□□□□ 0.5
KLHDC4-225	ENST00000569487	WDR12	Q9GZL7	423 aa	Known RBP	18.18	■□□□□ 0.5
KLHDC4-225	ENST00000569487	TRIT1	Q9H3H1	467 aa	Known RBP	18.18	■□□□□ 0.5
KLHDC4-225	ENST00000569487	LTB4R2	Q9NPC1	389 aa		18.18	■□□□□ 0.5
KLHDC4-225	ENST00000569487	UTS2R	Q9UKP6	389 aa		18.18	■□□□□ 0.5
KLHDC4-225	ENST00000569487	DOLK	Q9UPQ8	538 aa		18.18	■□□□□ 0.5
KLHDC4-225	ENST00000569487	OARD1	Q9Y530	152 aa		18.18	■□□□□ 0.5
KLHDC4-225	ENST00000569487	ZNF99	A8MXY4	864 aa	Predicted RBP	18.17	■□□□□ 0.5
KLHDC4-225	ENST00000569487	TAPBP	O15533	448 aa		18.17	■□□□□ 0.5
KLHDC4-225	ENST00000569487	HS6ST1	O60243	411 aa		18.17	■□□□□ 0.5
KLHDC4-225	ENST00000569487	NDUFS2	O75306	463 aa		18.17	■□□□□ 0.5
KLHDC4-225	ENST00000569487	PGR	P06401	933 aa		18.17	■□□□□ 0.5
KLHDC4-225	ENST00000569487	RHOC	P08134	193 aa		18.17	■□□□□ 0.5
KLHDC4-225	ENST00000569487	RPS3	P23396	243 aa	Known RBP eCLIP	18.17	■□□□□ 0.5
KLHDC4-225	ENST00000569487	RAD23A	P54725	363 aa		18.17	■□□□□ 0.5
KLHDC4-225	ENST00000569487	ZNF77	Q15935	545 aa		18.17	■□□□□ 0.5
KLHDC4-225	ENST00000569487	CERS6	Q6ZMG9	384 aa		18.17	■□□□□ 0.5
KLHDC4-225	ENST00000569487	MYLIP	Q8WY64	445 aa		18.17	■□□□□ 0.5
KLHDC4-225	ENST00000569487	ASIC4	Q96FT7	647 aa		18.17	■□□□□ 0.5
KLHDC4-225	ENST00000569487	VMP1	Q96GC9	406 aa		18.17	■□□□□ 0.5
KLHDC4-225	ENST00000569487	DGCR6L	Q9BY27	220 aa		18.17	■□□□□ 0.5
KLHDC4-225	ENST00000569487	CLDND1	Q9NY35	253 aa		18.17	■□□□□ 0.5
KLHDC4-225	ENST00000569487	IL17C	Q9P0M4	197 aa		18.17	■□□□□ 0.5
KLHDC4-225	ENST00000569487	EVL	Q9UI08	416 aa	Predicted RBP	18.17	■□□□□ 0.5
KLHDC4-225	ENST00000569487	TMEFF2	Q9UIK5	374 aa	Predicted RBP	18.17	■□□□□ 0.5
KLHDC4-225	ENST00000569487	ZMYM5	Q9UJ78	669 aa		18.17	■□□□□ 0.5
KLHDC4-225	ENST00000569487	INVS	Q9Y283	1065 aa		18.17	■□□□□ 0.5
KLHDC4-225	ENST00000569487	COL6A3	P12111	3177 aa		18.17	■□□□□ 0.5
KLHDC4-225	ENST00000569487		M0QX08	132 aa		18.16	■□□□□ 0.5
KLHDC4-225	ENST00000569487	CREG1	O75629	220 aa		18.16	■□□□□ 0.5
KLHDC4-225	ENST00000569487	FSHR	P23945	695 aa		18.16	■□□□□ 0.5
KLHDC4-225	ENST00000569487	GNPDA1	P46926	289 aa		18.16	■□□□□ 0.5
KLHDC4-225	ENST00000569487	HSPA7	P48741	367 aa		18.16	■□□□□ 0.5
KLHDC4-225	ENST00000569487	SPANXN4	Q5MJ08	99 aa		18.16	■□□□□ 0.5
KLHDC4-225	ENST00000569487	ANKRD34A	Q69YU3	496 aa		18.16	■□□□□ 0.5
KLHDC4-225	ENST00000569487	METTL2B	Q6P1Q9	378 aa	Known RBP	18.16	■□□□□ 0.5
KLHDC4-225	ENST00000569487	NCEH1	Q6PIU2	408 aa		18.16	■□□□□ 0.5
KLHDC4-225	ENST00000569487	CHST9	Q7L1S5	443 aa		18.16	■□□□□ 0.5
KLHDC4-225	ENST00000569487	TMEM179B	Q7Z7N9	219 aa		18.16	■□□□□ 0.5
KLHDC4-225	ENST00000569487	DCP2	Q8IU60	420 aa	Known RBP	18.16	■□□□□ 0.5
KLHDC4-225	ENST00000569487	FAM217A	Q8IXS0	508 aa		18.16	■□□□□ 0.5
KLHDC4-225	ENST00000569487	LIX1	Q8N485	282 aa		18.16	■□□□□ 0.5
KLHDC4-225	ENST00000569487	TMCO5A	Q8N6Q1	288 aa		18.16	■□□□□ 0.5
KLHDC4-225	ENST00000569487	ARL10	Q8N8L6	244 aa		18.16	■□□□□ 0.5
KLHDC4-225	ENST00000569487	UBTD2	Q8WUN7	234 aa		18.16	■□□□□ 0.5
KLHDC4-225	ENST00000569487	MRO	Q9BYG7	248 aa		18.16	■□□□□ 0.5
KLHDC4-225	ENST00000569487	KAT8	Q9H7Z6	458 aa	Known RBP	18.16	■□□□□ 0.5

Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms