RNA–Protein interactions for RNA: ENST00000569422.1

LINC00558-201, long intergenic non-protein coding RNA 558, humanhuman

TSL 1 (best) BASIC

Gene LINC00558, Length 3,163 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00558-201ENST00000569422 NKAIN3Q8N8D7 197 aa8.53□□□□□ -1.04
LINC00558-201ENST00000569422 KREMEN2Q8NCW0 462 aa8.53□□□□□ -1.04
LINC00558-201ENST00000569422 ING5Q8WYH8 240 aa8.53□□□□□ -1.04
LINC00558-201ENST00000569422 ISG20Q96AZ6 181 aaKnown RBP8.53□□□□□ -1.04
LINC00558-201ENST00000569422 SDCCAG3Q96C92 435 aa8.53□□□□□ -1.04
LINC00558-201ENST00000569422 SLC47A1Q96FL8 570 aa8.53□□□□□ -1.04
LINC00558-201ENST00000569422 RBM14Q96PK6 669 aaKnown RBP8.53□□□□□ -1.04
LINC00558-201ENST00000569422 NAA50Q9GZZ1 169 aaKnown RBP8.53□□□□□ -1.04
LINC00558-201ENST00000569422 NTN4Q9HB63 628 aa8.53□□□□□ -1.04
LINC00558-201ENST00000569422 ASAH2Q9NR71 780 aa8.53□□□□□ -1.04
LINC00558-201ENST00000569422 GPRC5BQ9NZH0 403 aa8.53□□□□□ -1.04
LINC00558-201ENST00000569422 SLC25A13Q9UJS0 675 aa8.53□□□□□ -1.04
LINC00558-201ENST00000569422 PCDHB3Q9Y5E6 796 aa8.53□□□□□ -1.04
LINC00558-201ENST00000569422 ZFC3H1O60293 1989 aaKnown RBP8.53□□□□□ -1.04
LINC00558-201ENST00000569422 ELOVL7A1L3X0 281 aa8.53□□□□□ -1.04
LINC00558-201ENST00000569422 G3V2T6 193 aa8.53□□□□□ -1.04
LINC00558-201ENST00000569422 CXCR6O00574 342 aa8.53□□□□□ -1.04
LINC00558-201ENST00000569422 AREL1O15033 823 aa8.53□□□□□ -1.04
LINC00558-201ENST00000569422 SOCS5O75159 536 aa8.53□□□□□ -1.04
LINC00558-201ENST00000569422 SERPINA1P01009 418 aa8.53□□□□□ -1.04
LINC00558-201ENST00000569422 C1SP09871 688 aa8.53□□□□□ -1.04
LINC00558-201ENST00000569422 IL7RP16871 459 aa8.53□□□□□ -1.04
LINC00558-201ENST00000569422 GGT1P19440 569 aa8.53□□□□□ -1.04
LINC00558-201ENST00000569422 XPAP23025 273 aaPredicted RBP8.53□□□□□ -1.04
LINC00558-201ENST00000569422 JAK1P23458 1154 aa8.53□□□□□ -1.04
LINC00558-201ENST00000569422 STT3AP46977 705 aa8.53□□□□□ -1.04
LINC00558-201ENST00000569422 ARSFP54793 590 aa8.53□□□□□ -1.04
LINC00558-201ENST00000569422 CHIT1Q13231 466 aa8.53□□□□□ -1.04
LINC00558-201ENST00000569422 PMS2P3Q13401 168 aa8.53□□□□□ -1.04
LINC00558-201ENST00000569422 GTF2H3Q13889 308 aa8.53□□□□□ -1.04
LINC00558-201ENST00000569422 SUZ12Q15022 739 aaKnown RBP8.53□□□□□ -1.04
LINC00558-201ENST00000569422 TEAD2Q15562 447 aa8.53□□□□□ -1.04
LINC00558-201ENST00000569422 GPR33Q49SQ1 333 aa8.53□□□□□ -1.04
LINC00558-201ENST00000569422 ARSIQ5FYB1 569 aa8.53□□□□□ -1.04
LINC00558-201ENST00000569422 HTR3DQ70Z44 454 aa8.53□□□□□ -1.04
LINC00558-201ENST00000569422 GALNT5Q7Z7M9 940 aa8.53□□□□□ -1.04
LINC00558-201ENST00000569422 DDX53Q86TM3 631 aaKnown RBP8.53□□□□□ -1.04
LINC00558-201ENST00000569422 MSRB3Q8IXL7 192 aa8.53□□□□□ -1.04
LINC00558-201ENST00000569422 MFSD2AQ8NA29 543 aa8.53□□□□□ -1.04
LINC00558-201ENST00000569422 NETO1Q8TDF5 533 aa8.53□□□□□ -1.04
LINC00558-201ENST00000569422 VWCEQ96DN2 955 aa8.53□□□□□ -1.04
LINC00558-201ENST00000569422 CEP295NLQ96MC4 621 aa8.53□□□□□ -1.04
LINC00558-201ENST00000569422 EPB41L1Q9H4G0 881 aa8.53□□□□□ -1.04
LINC00558-201ENST00000569422 SLC32A1Q9H598 525 aa8.53□□□□□ -1.04
LINC00558-201ENST00000569422 PFDN2Q9UHV9 154 aa8.53□□□□□ -1.04
LINC00558-201ENST00000569422 TMPRSS11EQ9UL52 423 aa8.53□□□□□ -1.04
LINC00558-201ENST00000569422 WNT6Q9Y6F9 365 aa8.53□□□□□ -1.04
LINC00558-201ENST00000569422 TMEM221A6NGB7 291 aa8.52□□□□□ -1.05
LINC00558-201ENST00000569422 TTC34A8MYJ7 566 aa8.52□□□□□ -1.05
LINC00558-201ENST00000569422 MYO1GB0I1T2 1018 aa8.52□□□□□ -1.05
LINC00558-201ENST00000569422 HS6ST1O60243 411 aa8.52□□□□□ -1.05
LINC00558-201ENST00000569422 PRMT3O60678 531 aa8.52□□□□□ -1.05
LINC00558-201ENST00000569422 RAP2AP10114 183 aa8.52□□□□□ -1.05
LINC00558-201ENST00000569422 UMPSP11172 480 aa8.52□□□□□ -1.05
LINC00558-201ENST00000569422 LAG3P18627 525 aa8.52□□□□□ -1.05
LINC00558-201ENST00000569422 EPORP19235 508 aa8.52□□□□□ -1.05
LINC00558-201ENST00000569422 SHMT2P34897 504 aa8.52□□□□□ -1.05
LINC00558-201ENST00000569422 POLR2IP36954 125 aaKnown RBP8.52□□□□□ -1.05
LINC00558-201ENST00000569422 MAPK8P45983 427 aa8.52□□□□□ -1.05
LINC00558-201ENST00000569422 ARPC4P59998 168 aa8.52□□□□□ -1.05
LINC00558-201ENST00000569422 NAA20P61599 178 aa8.52□□□□□ -1.05
LINC00558-201ENST00000569422 CCSMST1Q4G0I0 132 aa8.52□□□□□ -1.05
LINC00558-201ENST00000569422 CARD16Q5EG05 197 aa8.52□□□□□ -1.05
LINC00558-201ENST00000569422 ADNP2Q6IQ32 1131 aa8.52□□□□□ -1.05
LINC00558-201ENST00000569422 DOK6Q6PKX4 331 aa8.52□□□□□ -1.05
LINC00558-201ENST00000569422 ZNF621Q6ZSS3 439 aa8.52□□□□□ -1.05
LINC00558-201ENST00000569422 KCTD8Q6ZWB6 473 aa8.52□□□□□ -1.05
LINC00558-201ENST00000569422 HSD11B1LQ7Z5J1 315 aa8.52□□□□□ -1.05
LINC00558-201ENST00000569422 SPRED1Q7Z699 444 aa8.52□□□□□ -1.05
LINC00558-201ENST00000569422 DPP10Q8N608 796 aa8.52□□□□□ -1.05
LINC00558-201ENST00000569422 HERC2P3Q9BVR0 1158 aa8.52□□□□□ -1.05
LINC00558-201ENST00000569422 ZDHHC4Q9NPG8 344 aa8.52□□□□□ -1.05
LINC00558-201ENST00000569422 AASSQ9UDR5 926 aa8.52□□□□□ -1.05
LINC00558-201ENST00000569422 TRBV5-4A0A0C4DH59 114 aa8.52□□□□□ -1.05
LINC00558-201ENST00000569422 HIDE1A8MVS5 230 aa8.52□□□□□ -1.05
LINC00558-201ENST00000569422 PTGES3LE9PB15 166 aa8.52□□□□□ -1.05
LINC00558-201ENST00000569422 MAN1A2O60476 641 aa8.52□□□□□ -1.05
LINC00558-201ENST00000569422 LEFTY1O75610 366 aa8.52□□□□□ -1.05
LINC00558-201ENST00000569422 CYP4B1P13584 511 aa8.52□□□□□ -1.05
LINC00558-201ENST00000569422 ATP1B2P14415 290 aaPredicted RBP8.52□□□□□ -1.05
LINC00558-201ENST00000569422 TYRP14679 529 aa8.52□□□□□ -1.05
LINC00558-201ENST00000569422 SPINT3P49223 89 aa8.52□□□□□ -1.05
LINC00558-201ENST00000569422 GABREP78334 506 aa8.52□□□□□ -1.05
LINC00558-201ENST00000569422 KIAA0040Q15053 153 aa8.52□□□□□ -1.05
LINC00558-201ENST00000569422 ADRM1Q16186 407 aa8.52□□□□□ -1.05
LINC00558-201ENST00000569422 USP39Q53GS9 565 aaKnown RBP8.52□□□□□ -1.05
LINC00558-201ENST00000569422 LY6G5CQ5SRR4 150 aa8.52□□□□□ -1.05
LINC00558-201ENST00000569422 ANGPTL8Q6UXH0 198 aa8.52□□□□□ -1.05
LINC00558-201ENST00000569422 TMEM26Q6ZUK4 368 aa8.52□□□□□ -1.05
LINC00558-201ENST00000569422 PACRGLQ8N7B6 248 aa8.52□□□□□ -1.05
LINC00558-201ENST00000569422 GPR156Q8NFN8 814 aa8.52□□□□□ -1.05
LINC00558-201ENST00000569422 OR7A2PQ8NGA2 310 aa8.52□□□□□ -1.05
LINC00558-201ENST00000569422 JPH3Q8WXH2 748 aaPredicted RBP8.52□□□□□ -1.05
LINC00558-201ENST00000569422 WRAP53Q9BUR4 548 aaKnown RBP8.52□□□□□ -1.05
LINC00558-201ENST00000569422 RIOK2Q9BVS4 552 aaKnown RBP8.52□□□□□ -1.05
LINC00558-201ENST00000569422 CCDC90BQ9GZT6 254 aa8.52□□□□□ -1.05
LINC00558-201ENST00000569422 CXorf21Q9HAI6 301 aa8.52□□□□□ -1.05
LINC00558-201ENST00000569422 SCHIP1Q9P0W5 487 aaPredicted RBP8.52□□□□□ -1.05
LINC00558-201ENST00000569422 PCDHGA11Q9Y5H2 935 aa8.52□□□□□ -1.05
LINC00558-201ENST00000569422 ANKRD36A6QL64 1941 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms