RNA–Protein interactions for RNA: ENST00000568877.5

COMMD4-224, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 770 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-224ENST00000568877 C1GALT1Q9NS00 363 aa16.16■□□□□ 0.18
COMMD4-224ENST00000568877 SEMA5BQ9P283 1151 aa16.16■□□□□ 0.18
COMMD4-224ENST00000568877 IGHV5-51A0A0C4DH38 117 aa16.15■□□□□ 0.18
COMMD4-224ENST00000568877 A0A0J9YY10 115 aa16.15■□□□□ 0.18
COMMD4-224ENST00000568877 MAP2K7O14733 419 aa16.15■□□□□ 0.18
COMMD4-224ENST00000568877 HYAL3O43820 417 aaPredicted RBP16.15■□□□□ 0.18
COMMD4-224ENST00000568877 ANKRD34CP0C6C1 535 aa16.15■□□□□ 0.18
COMMD4-224ENST00000568877 MYZAPP0CAP1 466 aa16.15■□□□□ 0.18
COMMD4-224ENST00000568877 CCND1P24385 295 aa16.15■□□□□ 0.18
COMMD4-224ENST00000568877 PSMB5P28074 263 aa16.15■□□□□ 0.18
COMMD4-224ENST00000568877 LSSP48449 732 aa16.15■□□□□ 0.18
COMMD4-224ENST00000568877 TNFAIP8L3Q5GJ75 292 aa16.15■□□□□ 0.18
COMMD4-224ENST00000568877 THEMIS2Q5TEJ8 643 aa16.15■□□□□ 0.18
COMMD4-224ENST00000568877 CAPN13Q6MZZ7 669 aaPredicted RBP16.15■□□□□ 0.18
COMMD4-224ENST00000568877 CDHR3Q6ZTQ4 885 aa16.15■□□□□ 0.18
COMMD4-224ENST00000568877 FAM20CQ8IXL6 584 aa16.15■□□□□ 0.18
COMMD4-224ENST00000568877 COL27A1Q8IZC6 1860 aaPredicted RBP16.15■□□□□ 0.18
COMMD4-224ENST00000568877 TMEM151AQ8N4L1 468 aa16.15■□□□□ 0.18
COMMD4-224ENST00000568877 KLHL6Q8WZ60 621 aa16.15■□□□□ 0.18
COMMD4-224ENST00000568877 ALKBH8Q96BT7 664 aaKnown RBP16.15■□□□□ 0.18
COMMD4-224ENST00000568877 PYCR2Q96C36 320 aa16.15■□□□□ 0.18
COMMD4-224ENST00000568877 SMC6Q96SB8 1091 aa16.15■□□□□ 0.18
COMMD4-224ENST00000568877 MIPEPQ99797 713 aa16.15■□□□□ 0.18
COMMD4-224ENST00000568877 ACAT2Q9BWD1 397 aa16.15■□□□□ 0.18
COMMD4-224ENST00000568877 PCBD2Q9H0N5 130 aa16.15■□□□□ 0.18
COMMD4-224ENST00000568877 VIPAS39Q9H9C1 493 aa16.15■□□□□ 0.18
COMMD4-224ENST00000568877 ABCF3Q9NUQ8 709 aa16.15■□□□□ 0.18
COMMD4-224ENST00000568877 SENP1Q9P0U3 644 aa16.15■□□□□ 0.18
COMMD4-224ENST00000568877 CPSF2Q9P2I0 782 aaKnown RBP16.15■□□□□ 0.18
COMMD4-224ENST00000568877 TAC3Q9UHF0 121 aa16.15■□□□□ 0.18
COMMD4-224ENST00000568877 PTBP2Q9UKA9 531 aaKnown RBP16.15■□□□□ 0.18
COMMD4-224ENST00000568877 GRID1Q9ULK0 1009 aa16.15■□□□□ 0.18
COMMD4-224ENST00000568877 GOLGA6L10A6NI86 522 aa16.14■□□□□ 0.17
COMMD4-224ENST00000568877 SLC9B1P1A6NJY1 282 aa16.14■□□□□ 0.17
COMMD4-224ENST00000568877 AGPSO00116 658 aa16.14■□□□□ 0.17
COMMD4-224ENST00000568877 TK2O00142 265 aa16.14■□□□□ 0.17
COMMD4-224ENST00000568877 HGSO14964 777 aaPredicted RBP16.14■□□□□ 0.17
COMMD4-224ENST00000568877 TAPBPO15533 448 aa16.14■□□□□ 0.17
COMMD4-224ENST00000568877 KLK8O60259 260 aa16.14■□□□□ 0.17
COMMD4-224ENST00000568877 IPO13O94829 963 aaKnown RBP16.14■□□□□ 0.17
COMMD4-224ENST00000568877 FKBP9O95302 570 aa16.14■□□□□ 0.17
COMMD4-224ENST00000568877 GFAPP14136 432 aa16.14■□□□□ 0.17
COMMD4-224ENST00000568877 GGT5P36269 586 aa16.14■□□□□ 0.17
COMMD4-224ENST00000568877 SLC6A12P48065 614 aa16.14■□□□□ 0.17
COMMD4-224ENST00000568877 SEPHS1P49903 392 aa16.14■□□□□ 0.17
COMMD4-224ENST00000568877 PRDX1Q06830 199 aaKnown RBP16.14■□□□□ 0.17
COMMD4-224ENST00000568877 C16orf72Q14CZ0 275 aa16.14■□□□□ 0.17
COMMD4-224ENST00000568877 C18orf21Q32NC0 220 aaPredicted RBP16.14■□□□□ 0.17
COMMD4-224ENST00000568877 PTCHD3Q3KNS1 767 aa16.14■□□□□ 0.17
COMMD4-224ENST00000568877 PRAMEF13Q5VWM6 474 aa16.14■□□□□ 0.17
COMMD4-224ENST00000568877 KMT5CQ86Y97 462 aa16.14■□□□□ 0.17
COMMD4-224ENST00000568877 MARCH9Q86YJ5 346 aa16.14■□□□□ 0.17
COMMD4-224ENST00000568877 KLHDC8AQ8IYD2 350 aa16.14■□□□□ 0.17
COMMD4-224ENST00000568877 BANPQ8N9N5 519 aa16.14■□□□□ 0.17
COMMD4-224ENST00000568877 OR2L3Q8NG85 312 aa16.14■□□□□ 0.17
COMMD4-224ENST00000568877 LIN37Q96GY3 246 aaPredicted RBP16.14■□□□□ 0.17
COMMD4-224ENST00000568877 APOPT1Q96IL0 206 aa16.14■□□□□ 0.17
COMMD4-224ENST00000568877 TRAPPC9Q96Q05 1148 aa16.14■□□□□ 0.17
COMMD4-224ENST00000568877 TMEM79Q9BSE2 394 aa16.14■□□□□ 0.17
COMMD4-224ENST00000568877 CNOT10Q9H9A5 744 aaKnown RBP16.14■□□□□ 0.17
COMMD4-224ENST00000568877 INTS7Q9NVH2 962 aaKnown RBP16.14■□□□□ 0.17
COMMD4-224ENST00000568877 MKS1Q9NXB0 559 aa16.14■□□□□ 0.17
COMMD4-224ENST00000568877 WWOXQ9NZC7 414 aa16.14■□□□□ 0.17
COMMD4-224ENST00000568877 TMCO1Q9UM00 188 aa16.14■□□□□ 0.17
COMMD4-224ENST00000568877 TARM1B6A8C7 271 aa16.13■□□□□ 0.17
COMMD4-224ENST00000568877 SMIM24O75264 130 aa16.13■□□□□ 0.17
COMMD4-224ENST00000568877 CCNDBP1O95273 360 aa16.13■□□□□ 0.17
COMMD4-224ENST00000568877 ZBTB11O95625 1053 aaPredicted RBP16.13■□□□□ 0.17
COMMD4-224ENST00000568877 SBK3P0C264 359 aa16.13■□□□□ 0.17
COMMD4-224ENST00000568877 PVRP15151 417 aa16.13■□□□□ 0.17
COMMD4-224ENST00000568877 ST6GAL1P15907 406 aa16.13■□□□□ 0.17
COMMD4-224ENST00000568877 CREB1P16220 341 aa16.13■□□□□ 0.17
COMMD4-224ENST00000568877 CMPK1P30085 196 aa16.13■□□□□ 0.17
COMMD4-224ENST00000568877 CSTF2P33240 577 aaKnown RBP eCLIP16.13■□□□□ 0.17
COMMD4-224ENST00000568877 GDF5P43026 501 aa16.13■□□□□ 0.17
COMMD4-224ENST00000568877 ARL4DP49703 201 aa16.13■□□□□ 0.17
COMMD4-224ENST00000568877 ALDH18A1P54886 795 aaKnown RBP16.13■□□□□ 0.17
COMMD4-224ENST00000568877 YBX1P67809 324 aaKnown RBP16.13■□□□□ 0.17
COMMD4-224ENST00000568877 ABATP80404 500 aa16.13■□□□□ 0.17
COMMD4-224ENST00000568877 PFKFB4Q16877 469 aa16.13■□□□□ 0.17
COMMD4-224ENST00000568877 KIAA1614Q5VZ46 1190 aa16.13■□□□□ 0.17
COMMD4-224ENST00000568877 ICE2Q659A1 982 aa16.13■□□□□ 0.17
COMMD4-224ENST00000568877 LCTLQ6UWM7 567 aa16.13■□□□□ 0.17
COMMD4-224ENST00000568877 EXOC3L1Q86VI1 746 aa16.13■□□□□ 0.17
COMMD4-224ENST00000568877 THOC6Q86W42 341 aaKnown RBP16.13■□□□□ 0.17
COMMD4-224ENST00000568877 FBXO39Q8N4B4 442 aa16.13■□□□□ 0.17
COMMD4-224ENST00000568877 AGBL5Q8NDL9 886 aa16.13■□□□□ 0.17
COMMD4-224ENST00000568877 SLC41A2Q96JW4 573 aa16.13■□□□□ 0.17
COMMD4-224ENST00000568877 OR4K3Q96R72 315 aa16.13■□□□□ 0.17
COMMD4-224ENST00000568877 CMKLR1Q99788 373 aa16.13■□□□□ 0.17
COMMD4-224ENST00000568877 KLHL25Q9H0H3 589 aa16.13■□□□□ 0.17
COMMD4-224ENST00000568877 STMN4Q9H169 189 aaPredicted RBP16.13■□□□□ 0.17
COMMD4-224ENST00000568877 TMBIM4Q9HC24 238 aa16.13■□□□□ 0.17
COMMD4-224ENST00000568877 MRPS30Q9NP92 439 aaKnown RBP16.13■□□□□ 0.17
COMMD4-224ENST00000568877 AKAP7Q9P0M2 348 aaPredicted RBP16.13■□□□□ 0.17
COMMD4-224ENST00000568877 EMCNQ9ULC0 261 aa16.13■□□□□ 0.17
COMMD4-224ENST00000568877 SLC22A14Q9Y267 594 aa16.13■□□□□ 0.17
COMMD4-224ENST00000568877 CCDC187A0A096LP49 1063 aa16.12■□□□□ 0.17
COMMD4-224ENST00000568877 AGRPO00253 132 aa16.12■□□□□ 0.17
COMMD4-224ENST00000568877 SPAG7O75391 227 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms