RNA–Protein interactions for RNA: ENST00000566915.5

LPCAT2-208, Transcript of lysophosphatidylcholine acyltransferase 2, humanhuman

TSL 1 (best)

Gene LPCAT2, Length 5,285 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT2-208ENST00000566915 ZNF30P17039 623 aa4.25□□□□□ -1.73
LPCAT2-208ENST00000566915 CTPS1P17812 591 aa4.25□□□□□ -1.73
LPCAT2-208ENST00000566915 NELFEP18615 380 aaKnown RBP4.25□□□□□ -1.73
LPCAT2-208ENST00000566915 NDUFS1P28331 727 aa4.25□□□□□ -1.73
LPCAT2-208ENST00000566915 CD40LGP29965 261 aa4.25□□□□□ -1.73
LPCAT2-208ENST00000566915 MSX2P35548 267 aaPredicted RBP4.25□□□□□ -1.73
LPCAT2-208ENST00000566915 CAPZA1P52907 286 aa4.25□□□□□ -1.73
LPCAT2-208ENST00000566915 PHC1P78364 1004 aa4.25□□□□□ -1.73
LPCAT2-208ENST00000566915 GSTM4Q03013 218 aa4.25□□□□□ -1.73
LPCAT2-208ENST00000566915 ZBTB6Q15916 424 aa4.25□□□□□ -1.73
LPCAT2-208ENST00000566915 CRTC2Q53ET0 693 aaPredicted RBP4.25□□□□□ -1.73
LPCAT2-208ENST00000566915 TPGS2Q68CL5 300 aa4.25□□□□□ -1.73
LPCAT2-208ENST00000566915 DET1Q7L5Y6 550 aa4.25□□□□□ -1.73
LPCAT2-208ENST00000566915 CHERPQ8IWX8 916 aaKnown RBP4.25□□□□□ -1.73
LPCAT2-208ENST00000566915 AVL9Q8NBF6 648 aa4.25□□□□□ -1.73
LPCAT2-208ENST00000566915 OR10H5Q8NGA6 315 aa4.25□□□□□ -1.73
LPCAT2-208ENST00000566915 LMO3Q8TAP4 145 aa4.25□□□□□ -1.73
LPCAT2-208ENST00000566915 SLC22A18Q96BI1 424 aa4.25□□□□□ -1.73
LPCAT2-208ENST00000566915 ISOC1Q96CN7 298 aa4.25□□□□□ -1.73
LPCAT2-208ENST00000566915 PCED1BQ96HM7 432 aa4.25□□□□□ -1.73
LPCAT2-208ENST00000566915 CDKN2AIPNLQ96HQ2 116 aa4.25□□□□□ -1.73
LPCAT2-208ENST00000566915 DNAJC1Q96KC8 554 aaKnown RBP4.25□□□□□ -1.73
LPCAT2-208ENST00000566915 SLC35G5Q96KT7 338 aa4.25□□□□□ -1.73
LPCAT2-208ENST00000566915 FRMD6Q96NE9 622 aa4.25□□□□□ -1.73
LPCAT2-208ENST00000566915 OR52B2Q96RD2 323 aa4.25□□□□□ -1.73
LPCAT2-208ENST00000566915 SLC2A11Q9BYW1 496 aa4.25□□□□□ -1.73
LPCAT2-208ENST00000566915 KCNH6Q9H252 994 aa4.25□□□□□ -1.73
LPCAT2-208ENST00000566915 SMOC2Q9H3U7 446 aa4.25□□□□□ -1.73
LPCAT2-208ENST00000566915 MEAF6Q9HAF1 191 aa4.25□□□□□ -1.73
LPCAT2-208ENST00000566915 BPIFA1Q9NP55 256 aa4.25□□□□□ -1.73
LPCAT2-208ENST00000566915 ZDHHC3Q9NYG2 299 aa4.25□□□□□ -1.73
LPCAT2-208ENST00000566915 EIF2B4Q9UI10 523 aaKnown RBP4.25□□□□□ -1.73
LPCAT2-208ENST00000566915 ERVW-1Q9UQF0 538 aa4.25□□□□□ -1.73
LPCAT2-208ENST00000566915 TMEM5Q9Y2B1 443 aa4.25□□□□□ -1.73
LPCAT2-208ENST00000566915 PCDHGB5Q9Y5G0 923 aa4.25□□□□□ -1.73
LPCAT2-208ENST00000566915 PCDHGB2Q9Y5G2 931 aa4.25□□□□□ -1.73
LPCAT2-208ENST00000566915 PCDHAC2Q9Y5I4 1007 aa4.25□□□□□ -1.73
LPCAT2-208ENST00000566915 SLX4Q8IY92 1834 aa4.25□□□□□ -1.73
LPCAT2-208ENST00000566915 PRAMEF33A0A0G2JMD5 474 aa4.25□□□□□ -1.73
LPCAT2-208ENST00000566915 A0A1W2PQ45 241 aaPredicted RBP4.25□□□□□ -1.73
LPCAT2-208ENST00000566915 A0A1W2PQY0 241 aa4.25□□□□□ -1.73
LPCAT2-208ENST00000566915 GTPBP1O00178 669 aaKnown RBP4.25□□□□□ -1.73
LPCAT2-208ENST00000566915 PSMD11O00231 422 aa4.25□□□□□ -1.73
LPCAT2-208ENST00000566915 CLDN5O00501 218 aa4.25□□□□□ -1.73
LPCAT2-208ENST00000566915 XKRYO14609 159 aa4.25□□□□□ -1.73
LPCAT2-208ENST00000566915 NOBOXO60393 691 aa4.25□□□□□ -1.73
LPCAT2-208ENST00000566915 PRAMEF10O60809 474 aa4.25□□□□□ -1.73
LPCAT2-208ENST00000566915 PSIP1O75475 530 aaKnown RBP4.25□□□□□ -1.73
LPCAT2-208ENST00000566915 CNTN5O94779 1100 aa4.25□□□□□ -1.73
LPCAT2-208ENST00000566915 CDK14O94921 469 aa4.25□□□□□ -1.73
LPCAT2-208ENST00000566915 RAB36O95755 333 aa4.25□□□□□ -1.73
LPCAT2-208ENST00000566915 NUDT14O95848 222 aa4.25□□□□□ -1.73
LPCAT2-208ENST00000566915 NR2C1P13056 603 aa4.25□□□□□ -1.73
LPCAT2-208ENST00000566915 CKMT2P17540 419 aa4.25□□□□□ -1.73
LPCAT2-208ENST00000566915 MAPK3P27361 379 aaPredicted RBP4.25□□□□□ -1.73
LPCAT2-208ENST00000566915 CSTF2P33240 577 aaKnown RBP eCLIP4.25□□□□□ -1.73
LPCAT2-208ENST00000566915 LEPRP48357 1165 aaKnown RBP4.25□□□□□ -1.73
LPCAT2-208ENST00000566915 GBX2P52951 348 aaPredicted RBP4.25□□□□□ -1.73
LPCAT2-208ENST00000566915 FADDQ13158 208 aa4.25□□□□□ -1.73
LPCAT2-208ENST00000566915 DSC3Q14574 896 aa4.25□□□□□ -1.73
LPCAT2-208ENST00000566915 SYT16Q17RD7 645 aa4.25□□□□□ -1.73
LPCAT2-208ENST00000566915 SFT2D3Q587I9 215 aa4.25□□□□□ -1.73
LPCAT2-208ENST00000566915 MORN1Q5T089 497 aa4.25□□□□□ -1.73
LPCAT2-208ENST00000566915 LCN8Q6JVE9 175 aa4.25□□□□□ -1.73
LPCAT2-208ENST00000566915 RPL13AP3Q6NVV1 102 aa4.25□□□□□ -1.73
LPCAT2-208ENST00000566915 DOK6Q6PKX4 331 aa4.25□□□□□ -1.73
LPCAT2-208ENST00000566915 RNF19BQ6ZMZ0 732 aa4.25□□□□□ -1.73
LPCAT2-208ENST00000566915 LINC00299Q6ZSB3 139 aa4.25□□□□□ -1.73
LPCAT2-208ENST00000566915 NUDT13Q86X67 352 aa4.25□□□□□ -1.73
LPCAT2-208ENST00000566915 EGFL6Q8IUX8 553 aa4.25□□□□□ -1.73
LPCAT2-208ENST00000566915 ADGRG2Q8IZP9 1017 aa4.25□□□□□ -1.73
LPCAT2-208ENST00000566915 BIRC7Q96CA5 298 aa4.25□□□□□ -1.73
LPCAT2-208ENST00000566915 SLC7A6OSQ96CW6 309 aaPredicted RBP4.25□□□□□ -1.73
LPCAT2-208ENST00000566915 NPY6RQ99463 290 aa4.25□□□□□ -1.73
LPCAT2-208ENST00000566915 FEM1AQ9BSK4 669 aa4.25□□□□□ -1.73
LPCAT2-208ENST00000566915 TM6SF2Q9BZW4 377 aa4.25□□□□□ -1.73
LPCAT2-208ENST00000566915 TRIM36Q9NQ86 728 aa4.25□□□□□ -1.73
LPCAT2-208ENST00000566915 ARMC1Q9NVT9 282 aa4.25□□□□□ -1.73
LPCAT2-208ENST00000566915 MTMR10Q9NXD2 777 aa4.25□□□□□ -1.73
LPCAT2-208ENST00000566915 COPZ2Q9P299 210 aa4.25□□□□□ -1.73
LPCAT2-208ENST00000566915 HECAQ9UBI9 543 aaPredicted RBP4.25□□□□□ -1.73
LPCAT2-208ENST00000566915 P2RX2Q9UBL9 471 aa4.25□□□□□ -1.73
LPCAT2-208ENST00000566915 B3GNT3Q9Y2A9 372 aa4.25□□□□□ -1.73
LPCAT2-208ENST00000566915 HCN4Q9Y3Q4 1203 aa4.25□□□□□ -1.73
LPCAT2-208ENST00000566915 TAF1LQ8IZX4 1826 aa4.25□□□□□ -1.73
LPCAT2-208ENST00000566915 FAM155AB1AL88 458 aaPredicted RBP4.25□□□□□ -1.73
LPCAT2-208ENST00000566915 TLR4O00206 839 aa4.25□□□□□ -1.73
LPCAT2-208ENST00000566915 SNNO75324 88 aaPredicted RBP4.25□□□□□ -1.73
LPCAT2-208ENST00000566915 TRIM3O75382 744 aaPredicted RBP4.25□□□□□ -1.73
LPCAT2-208ENST00000566915 CREG1O75629 220 aa4.25□□□□□ -1.73
LPCAT2-208ENST00000566915 RSL1D1O76021 490 aaKnown RBP4.25□□□□□ -1.73
LPCAT2-208ENST00000566915 PTTG1O95997 202 aa4.25□□□□□ -1.73
LPCAT2-208ENST00000566915 LINGO3P0C6S8 592 aa4.25□□□□□ -1.73
LPCAT2-208ENST00000566915 TAL1P17542 331 aaPredicted RBP4.25□□□□□ -1.73
LPCAT2-208ENST00000566915 MYF6P23409 242 aa4.25□□□□□ -1.73
LPCAT2-208ENST00000566915 IL1R2P27930 398 aa4.25□□□□□ -1.73
LPCAT2-208ENST00000566915 GSTM2P28161 218 aa4.25□□□□□ -1.73
LPCAT2-208ENST00000566915 MLLT6P55198 1093 aaPredicted RBP4.25□□□□□ -1.73
LPCAT2-208ENST00000566915 PPP3R1P63098 170 aa4.25□□□□□ -1.73
LPCAT2-208ENST00000566915 BEX3Q00994 111 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms