RNA–Protein interactions for RNA: ENST00000566703.1

RNF40-209, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 808 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-209ENST00000566703 AGAP4Q96P64 663 aa14.35□□□□□ -0.11
RNF40-209ENST00000566703 WDR77Q9BQA1 342 aaPredicted RBP14.35□□□□□ -0.11
RNF40-209ENST00000566703 KIFC1Q9BW19 673 aa14.35□□□□□ -0.11
RNF40-209ENST00000566703 SPATA7Q9P0W8 599 aa14.35□□□□□ -0.11
RNF40-209ENST00000566703 GUCA1BQ9UMX6 200 aa14.35□□□□□ -0.11
RNF40-209ENST00000566703 SLC5A6Q9Y289 635 aa14.35□□□□□ -0.11
RNF40-209ENST00000566703 HS3ST3B1Q9Y662 390 aa14.35□□□□□ -0.11
RNF40-209ENST00000566703 FAM169AQ9Y6X4 670 aa14.35□□□□□ -0.11
RNF40-209ENST00000566703 FLNCQ14315 2725 aa14.34□□□□□ -0.11
RNF40-209ENST00000566703 LRRK2Q5S007 2527 aa14.34□□□□□ -0.11
RNF40-209ENST00000566703 HYKKA2RU49 373 aa14.34□□□□□ -0.11
RNF40-209ENST00000566703 CTSVO60911 334 aa14.34□□□□□ -0.11
RNF40-209ENST00000566703 LDLRP01130 860 aa14.34□□□□□ -0.11
RNF40-209ENST00000566703 ZSCAN5DPP0CG00 497 aa14.34□□□□□ -0.11
RNF40-209ENST00000566703 ATXN8OSP0DMR3 200 aa14.34□□□□□ -0.11
RNF40-209ENST00000566703 MCM3P25205 808 aa14.34□□□□□ -0.11
RNF40-209ENST00000566703 NMBRP28336 390 aa14.34□□□□□ -0.11
RNF40-209ENST00000566703 ATP5DP30049 168 aa14.34□□□□□ -0.11
RNF40-209ENST00000566703 FOXL2P58012 376 aa14.34□□□□□ -0.11
RNF40-209ENST00000566703 ELOAQ14241 798 aaKnown RBP14.34□□□□□ -0.11
RNF40-209ENST00000566703 TUBB8Q3ZCM7 444 aa14.34□□□□□ -0.11
RNF40-209ENST00000566703 RNF187Q5TA31 235 aaPredicted RBP14.34□□□□□ -0.11
RNF40-209ENST00000566703 MRNIPQ6NTE8 343 aa14.34□□□□□ -0.11
RNF40-209ENST00000566703 MAMDC2Q7Z304 686 aaPredicted RBP14.34□□□□□ -0.11
RNF40-209ENST00000566703 CUZD1Q86UP6 607 aa14.34□□□□□ -0.11
RNF40-209ENST00000566703 TAX1BP1Q86VP1 789 aa14.34□□□□□ -0.11
RNF40-209ENST00000566703 LURAP1LQ8IV03 231 aa14.34□□□□□ -0.11
RNF40-209ENST00000566703 TMEM151BQ8IW70 566 aa14.34□□□□□ -0.11
RNF40-209ENST00000566703 OR2L3Q8NG85 312 aa14.34□□□□□ -0.11
RNF40-209ENST00000566703 OR2A1Q8NGT9 310 aa14.34□□□□□ -0.11
RNF40-209ENST00000566703 BIRC8Q96P09 236 aa14.34□□□□□ -0.11
RNF40-209ENST00000566703 LMF1Q96S06 567 aa14.34□□□□□ -0.11
RNF40-209ENST00000566703 LHPPQ9H008 270 aa14.34□□□□□ -0.11
RNF40-209ENST00000566703 ZBTB20Q9HC78 741 aaPredicted RBP14.34□□□□□ -0.11
RNF40-209ENST00000566703 ZNF304Q9HCX3 659 aa14.34□□□□□ -0.11
RNF40-209ENST00000566703 CIDEBQ9UHD4 219 aa14.34□□□□□ -0.11
RNF40-209ENST00000566703 ERRFI1Q9UJM3 462 aaPredicted RBP14.34□□□□□ -0.11
RNF40-209ENST00000566703 NFS1Q9Y697 457 aa14.34□□□□□ -0.11
RNF40-209ENST00000566703 RELNP78509 3460 aa14.34□□□□□ -0.11
RNF40-209ENST00000566703 FER1L5A0AVI2 2057 aa14.34□□□□□ -0.11
RNF40-209ENST00000566703 A0A1W2PPV9 198 aa14.33□□□□□ -0.12
RNF40-209ENST00000566703 MASP2O00187 686 aa14.33□□□□□ -0.12
RNF40-209ENST00000566703 PHF2O75151 1096 aa14.33□□□□□ -0.12
RNF40-209ENST00000566703 MATN4O95460 622 aa14.33□□□□□ -0.12
RNF40-209ENST00000566703 ESR1P03372 595 aa14.33□□□□□ -0.12
RNF40-209ENST00000566703 RNF224P0DH78 156 aa14.33□□□□□ -0.12
RNF40-209ENST00000566703 TSFMP43897 325 aaKnown RBP14.33□□□□□ -0.12
RNF40-209ENST00000566703 OR1D4P47884 311 aa14.33□□□□□ -0.12
RNF40-209ENST00000566703 EIF3BP55884 814 aaKnown RBP14.33□□□□□ -0.12
RNF40-209ENST00000566703 VSX2P58304 361 aaPredicted RBP14.33□□□□□ -0.12
RNF40-209ENST00000566703 OCA2Q04671 838 aa14.33□□□□□ -0.12
RNF40-209ENST00000566703 GBX1Q14549 363 aa14.33□□□□□ -0.12
RNF40-209ENST00000566703 ARHGAP19Q14CB8 494 aa14.33□□□□□ -0.12
RNF40-209ENST00000566703 RBBP7Q16576 425 aa14.33□□□□□ -0.12
RNF40-209ENST00000566703 TYSND1Q2T9J0 566 aa14.33□□□□□ -0.12
RNF40-209ENST00000566703 B3GNTL1Q67FW5 361 aaPredicted RBP14.33□□□□□ -0.12
RNF40-209ENST00000566703 HIST2H2BCQ6DN03 193 aa14.33□□□□□ -0.12
RNF40-209ENST00000566703 FBXO42Q6P3S6 717 aa14.33□□□□□ -0.12
RNF40-209ENST00000566703 LRRC8BQ6P9F7 803 aa14.33□□□□□ -0.12
RNF40-209ENST00000566703 RNF44Q7L0R7 432 aa14.33□□□□□ -0.12
RNF40-209ENST00000566703 ST6GALNAC3Q8NDV1 305 aa14.33□□□□□ -0.12
RNF40-209ENST00000566703 DNAJB14Q8TBM8 379 aa14.33□□□□□ -0.12
RNF40-209ENST00000566703 SKA2Q8WVK7 121 aaPredicted RBP14.33□□□□□ -0.12
RNF40-209ENST00000566703 ZDHHC19Q8WVZ1 309 aaPredicted RBP14.33□□□□□ -0.12
RNF40-209ENST00000566703 C5orf34Q96MH7 638 aa14.33□□□□□ -0.12
RNF40-209ENST00000566703 EPS8L2Q9H6S3 715 aa14.33□□□□□ -0.12
RNF40-209ENST00000566703 HOMER3Q9NSC5 361 aa14.33□□□□□ -0.12
RNF40-209ENST00000566703 CDC14AQ9UNH5 594 aa14.33□□□□□ -0.12
RNF40-209ENST00000566703 ANKRD12Q6UB98 2062 aa14.33□□□□□ -0.12
RNF40-209ENST00000566703 ICE1Q9Y2F5 2266 aa14.32□□□□□ -0.12
RNF40-209ENST00000566703 USP9YO00507 2555 aaPredicted RBP14.32□□□□□ -0.12
RNF40-209ENST00000566703 COL12A1Q99715 3063 aa14.32□□□□□ -0.12
RNF40-209ENST00000566703 IGLV3-12A0A075B6K2 115 aa14.32□□□□□ -0.12
RNF40-209ENST00000566703 OR2A25A4D2G3 310 aa14.32□□□□□ -0.12
RNF40-209ENST00000566703 GOLGA6L6A8MZA4 724 aa14.32□□□□□ -0.12
RNF40-209ENST00000566703 VAPBO95292 243 aa14.32□□□□□ -0.12
RNF40-209ENST00000566703 ERGP11308 486 aa14.32□□□□□ -0.12
RNF40-209ENST00000566703 CMPK1P30085 196 aa14.32□□□□□ -0.12
RNF40-209ENST00000566703 FMO4P31512 558 aa14.32□□□□□ -0.12
RNF40-209ENST00000566703 HSD17B2P37059 387 aa14.32□□□□□ -0.12
RNF40-209ENST00000566703 BDKRB1P46663 353 aa14.32□□□□□ -0.12
RNF40-209ENST00000566703 CRADDP78560 199 aa14.32□□□□□ -0.12
RNF40-209ENST00000566703 BASP1P80723 227 aaKnown RBP14.32□□□□□ -0.12
RNF40-209ENST00000566703 RELAQ04206 551 aa14.32□□□□□ -0.12
RNF40-209ENST00000566703 MUM1Q2TAK8 710 aa14.32□□□□□ -0.12
RNF40-209ENST00000566703 CCSMST1Q4G0I0 132 aa14.32□□□□□ -0.12
RNF40-209ENST00000566703 ANKRD20A4Q4UJ75 823 aa14.32□□□□□ -0.12
RNF40-209ENST00000566703 ISLR2Q6UXK2 745 aa14.32□□□□□ -0.12
RNF40-209ENST00000566703 ZNF662Q6ZS27 426 aa14.32□□□□□ -0.12
RNF40-209ENST00000566703 GSTA5Q7RTV2 222 aa14.32□□□□□ -0.12
RNF40-209ENST00000566703 KCNMB4Q86W47 210 aa14.32□□□□□ -0.12
RNF40-209ENST00000566703 GAS2L3Q86XJ1 694 aa14.32□□□□□ -0.12
RNF40-209ENST00000566703 OR11G2Q8NGC1 345 aa14.32□□□□□ -0.12
RNF40-209ENST00000566703 OR9A1PQ8NGU1 263 aa14.32□□□□□ -0.12
RNF40-209ENST00000566703 STT3BQ8TCJ2 826 aa14.32□□□□□ -0.12
RNF40-209ENST00000566703 LPGAT1Q92604 370 aa14.32□□□□□ -0.12
RNF40-209ENST00000566703 MFSD3Q96ES6 412 aa14.32□□□□□ -0.12
RNF40-209ENST00000566703 MVB12AQ96EY5 273 aa14.32□□□□□ -0.12
RNF40-209ENST00000566703 MIPEPQ99797 713 aa14.32□□□□□ -0.12
RNF40-209ENST00000566703 ZFYVE21Q9BQ24 234 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms