RNA–Protein interactions for RNA: ENST00000566550.1

HERPUD1-211, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 511 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-211ENST00000566550 ILVBLA1L0T0 632 aa3.19□□□□□ -1.9
HERPUD1-211ENST00000566550 PATE3B3GLJ2 98 aa3.19□□□□□ -1.9
HERPUD1-211ENST00000566550 PRSS46E5RG02 174 aa3.19□□□□□ -1.9
HERPUD1-211ENST00000566550 SMIM22K7EJ46 135 aa3.19□□□□□ -1.9
HERPUD1-211ENST00000566550 K7EQM0 130 aa3.19□□□□□ -1.9
HERPUD1-211ENST00000566550 XPO1O14980 1071 aaKnown RBP3.19□□□□□ -1.9
HERPUD1-211ENST00000566550 MAPK13O15264 365 aa3.19□□□□□ -1.9
HERPUD1-211ENST00000566550 CTAGE5O15320 804 aa3.19□□□□□ -1.9
HERPUD1-211ENST00000566550 CHADO15335 359 aa3.19□□□□□ -1.9
HERPUD1-211ENST00000566550 FOXN1O15353 648 aa3.19□□□□□ -1.9
HERPUD1-211ENST00000566550 MPPED1O15442 326 aa3.19□□□□□ -1.9
HERPUD1-211ENST00000566550 PSMD3O43242 534 aa3.19□□□□□ -1.9
HERPUD1-211ENST00000566550 NDUFB4O95168 129 aa3.19□□□□□ -1.9
HERPUD1-211ENST00000566550 OR6A2O95222 327 aa3.19□□□□□ -1.9
HERPUD1-211ENST00000566550 VNN2O95498 520 aa3.19□□□□□ -1.9
HERPUD1-211ENST00000566550 PLAUP00749 431 aa3.19□□□□□ -1.9
HERPUD1-211ENST00000566550 SERPINA3P01011 423 aa3.19□□□□□ -1.9
HERPUD1-211ENST00000566550 CXCL10P02778 98 aa3.19□□□□□ -1.9
HERPUD1-211ENST00000566550 CSN3P07498 182 aa3.19□□□□□ -1.9
HERPUD1-211ENST00000566550 CHRNGP07510 517 aa3.19□□□□□ -1.9
HERPUD1-211ENST00000566550 MMP3P08254 477 aa3.19□□□□□ -1.9
HERPUD1-211ENST00000566550 HMBSP08397 361 aa3.19□□□□□ -1.9
HERPUD1-211ENST00000566550 NUDT17P0C025 328 aa3.19□□□□□ -1.9
HERPUD1-211ENST00000566550 ZCCHC18P0CG32 403 aa3.19□□□□□ -1.9
HERPUD1-211ENST00000566550 CLUP10909 449 aa3.19□□□□□ -1.9
HERPUD1-211ENST00000566550 ZFP36P26651 326 aaKnown RBP3.19□□□□□ -1.9
HERPUD1-211ENST00000566550 PPP2R1AP30153 589 aa3.19□□□□□ -1.9
HERPUD1-211ENST00000566550 SSTR1P30872 391 aa3.19□□□□□ -1.9
HERPUD1-211ENST00000566550 DLSTP36957 453 aa3.19□□□□□ -1.9
HERPUD1-211ENST00000566550 FOLR3P41439 243 aa3.19□□□□□ -1.9
HERPUD1-211ENST00000566550 ARHGAP25P42331 645 aa3.19□□□□□ -1.9
HERPUD1-211ENST00000566550 PTGER3P43115 390 aa3.19□□□□□ -1.9
HERPUD1-211ENST00000566550 ME1P48163 572 aa3.19□□□□□ -1.9
HERPUD1-211ENST00000566550 CLCNKAP51800 687 aa3.19□□□□□ -1.9
HERPUD1-211ENST00000566550 VCPP55072 806 aaKnown RBP3.19□□□□□ -1.9
HERPUD1-211ENST00000566550 SPIBQ01892 262 aa3.19□□□□□ -1.9
HERPUD1-211ENST00000566550 FOXM1Q08050 763 aa3.19□□□□□ -1.9
HERPUD1-211ENST00000566550 FAM27E3Q08E93 113 aa3.19□□□□□ -1.9
HERPUD1-211ENST00000566550 TROAPQ12815 778 aa3.19□□□□□ -1.9
HERPUD1-211ENST00000566550 GRIK2Q13002 908 aa3.19□□□□□ -1.9
HERPUD1-211ENST00000566550 PKP1Q13835 747 aa3.19□□□□□ -1.9
HERPUD1-211ENST00000566550 TOB2Q14106 344 aaPredicted RBP3.19□□□□□ -1.9
HERPUD1-211ENST00000566550 VEZF1Q14119 521 aa3.19□□□□□ -1.9
HERPUD1-211ENST00000566550 R3HDM1Q15032 1099 aaKnown RBP3.19□□□□□ -1.9
HERPUD1-211ENST00000566550 RCN1Q15293 331 aa3.19□□□□□ -1.9
HERPUD1-211ENST00000566550 STXBP2Q15833 593 aa3.19□□□□□ -1.9
HERPUD1-211ENST00000566550 FAM174BQ3ZCQ3 159 aa3.19□□□□□ -1.9
HERPUD1-211ENST00000566550 AARS2Q5JTZ9 985 aaKnown RBP3.19□□□□□ -1.9
HERPUD1-211ENST00000566550 MIIPQ5JXC2 388 aa3.19□□□□□ -1.9
HERPUD1-211ENST00000566550 DCST1Q5T197 706 aa3.19□□□□□ -1.9
HERPUD1-211ENST00000566550 PM20D1Q6GTS8 502 aa3.19□□□□□ -1.9
HERPUD1-211ENST00000566550 PRR27Q6MZM9 219 aa3.19□□□□□ -1.9
HERPUD1-211ENST00000566550 LRRC70Q7Z2Q7 622 aa3.19□□□□□ -1.9
HERPUD1-211ENST00000566550 ANKRD46Q86W74 232 aa3.19□□□□□ -1.9
HERPUD1-211ENST00000566550 LONP2Q86WA8 852 aa3.19□□□□□ -1.9
HERPUD1-211ENST00000566550 AMIGO1Q86WK6 493 aa3.19□□□□□ -1.9
HERPUD1-211ENST00000566550 MEX3DQ86XN8 651 aaKnown RBP3.19□□□□□ -1.9
HERPUD1-211ENST00000566550 NRROSQ86YC3 692 aa3.19□□□□□ -1.9
HERPUD1-211ENST00000566550 CENPLQ8N0S6 344 aaPredicted RBP3.19□□□□□ -1.9
HERPUD1-211ENST00000566550 THEM5Q8N1Q8 247 aa3.19□□□□□ -1.9
HERPUD1-211ENST00000566550 GBP7Q8N8V2 638 aaPredicted RBP3.19□□□□□ -1.9
HERPUD1-211ENST00000566550 RASGEF1AQ8N9B8 481 aa3.19□□□□□ -1.9
HERPUD1-211ENST00000566550 FAM133AQ8N9E0 248 aa3.19□□□□□ -1.9
HERPUD1-211ENST00000566550 CCDC148Q8NFR7 591 aa3.19□□□□□ -1.9
HERPUD1-211ENST00000566550 ZNF671Q8TAW3 534 aa3.19□□□□□ -1.9
HERPUD1-211ENST00000566550 GPT2Q8TD30 523 aa3.19□□□□□ -1.9
HERPUD1-211ENST00000566550 CKAP2Q8WWK9 683 aa3.19□□□□□ -1.9
HERPUD1-211ENST00000566550 GIMAP1Q8WWP7 306 aa3.19□□□□□ -1.9
HERPUD1-211ENST00000566550 OIT3Q8WWZ8 545 aa3.19□□□□□ -1.9
HERPUD1-211ENST00000566550 CAVIN3Q969G5 261 aa3.19□□□□□ -1.9
HERPUD1-211ENST00000566550 RFT1Q96AA3 541 aa3.19□□□□□ -1.9
HERPUD1-211ENST00000566550 TMEM18Q96B42 140 aa3.19□□□□□ -1.9
HERPUD1-211ENST00000566550 PYCR2Q96C36 320 aa3.19□□□□□ -1.9
HERPUD1-211ENST00000566550 ZG16BQ96DA0 208 aa3.19□□□□□ -1.9
HERPUD1-211ENST00000566550 GIMAP5Q96F15 307 aa3.19□□□□□ -1.9
HERPUD1-211ENST00000566550 FAM89AQ96GI7 184 aa3.19□□□□□ -1.9
HERPUD1-211ENST00000566550 THOC3Q96J01 351 aaKnown RBP3.19□□□□□ -1.9
HERPUD1-211ENST00000566550 RPGRIP1Q96KN7 1286 aa3.19□□□□□ -1.9
HERPUD1-211ENST00000566550 CNOT6LQ96LI5 555 aaKnown RBP3.19□□□□□ -1.9
HERPUD1-211ENST00000566550 GSDMAQ96QA5 445 aa3.19□□□□□ -1.9
HERPUD1-211ENST00000566550 ZNF607Q96SK3 696 aa3.19□□□□□ -1.9
HERPUD1-211ENST00000566550 SECISBP2Q96T21 854 aaKnown RBP3.19□□□□□ -1.9
HERPUD1-211ENST00000566550 SPAG8Q99932 426 aaPredicted RBP3.19□□□□□ -1.9
HERPUD1-211ENST00000566550 TBCDQ9BTW9 1192 aa3.19□□□□□ -1.9
HERPUD1-211ENST00000566550 TMEM245Q9H330 911 aa3.19□□□□□ -1.9
HERPUD1-211ENST00000566550 UBQLN3Q9H347 655 aa3.19□□□□□ -1.9
HERPUD1-211ENST00000566550 MAGIXQ9H6Y5 334 aa3.19□□□□□ -1.9
HERPUD1-211ENST00000566550 MAGEF1Q9HAY2 307 aa3.19□□□□□ -1.9
HERPUD1-211ENST00000566550 MOV10Q9HCE1 1003 aaKnown RBP3.19□□□□□ -1.9
HERPUD1-211ENST00000566550 VAT1LQ9HCJ6 419 aa3.19□□□□□ -1.9
HERPUD1-211ENST00000566550 HHATLQ9HCP6 504 aa3.19□□□□□ -1.9
HERPUD1-211ENST00000566550 RPRD1BQ9NQG5 326 aaKnown RBP3.19□□□□□ -1.9
HERPUD1-211ENST00000566550 GLRX2Q9NS18 164 aa3.19□□□□□ -1.9
HERPUD1-211ENST00000566550 HOMER3Q9NSC5 361 aa3.19□□□□□ -1.9
HERPUD1-211ENST00000566550 PIGVQ9NUD9 493 aa3.19□□□□□ -1.9
HERPUD1-211ENST00000566550 HOXC10Q9NYD6 342 aa3.19□□□□□ -1.9
HERPUD1-211ENST00000566550 GTSE1Q9NYZ3 720 aa3.19□□□□□ -1.9
HERPUD1-211ENST00000566550 IL20RAQ9UHF4 553 aa3.19□□□□□ -1.9
HERPUD1-211ENST00000566550 KCNJ14Q9UNX9 436 aa3.19□□□□□ -1.9
HERPUD1-211ENST00000566550 LAMP3Q9UQV4 416 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms