RNA–Protein interactions for RNA: ENST00000564844.1

MAP1LC3B-206, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 3,085 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-206ENST00000564844 LATS2Q9NRM7 1088 aa19.97■□□□□ 0.79
MAP1LC3B-206ENST00000564844 S100A3P33764 101 aa19.97■□□□□ 0.79
MAP1LC3B-206ENST00000564844 GRK3P35626 688 aa19.97■□□□□ 0.79
MAP1LC3B-206ENST00000564844 CTSKP43235 329 aa19.97■□□□□ 0.79
MAP1LC3B-206ENST00000564844 PSEN2P49810 448 aa19.97■□□□□ 0.79
MAP1LC3B-206ENST00000564844 ZNF140P52738 457 aaPredicted RBP19.97■□□□□ 0.79
MAP1LC3B-206ENST00000564844 ACVR1Q04771 509 aa19.97■□□□□ 0.79
MAP1LC3B-206ENST00000564844 SHQ1Q6PI26 577 aaKnown RBP19.97■□□□□ 0.79
MAP1LC3B-206ENST00000564844 ENTHD1Q8IYW4 607 aa19.97■□□□□ 0.79
MAP1LC3B-206ENST00000564844 GPC2Q8N158 579 aa19.97■□□□□ 0.79
MAP1LC3B-206ENST00000564844 SKA2Q8WVK7 121 aaPredicted RBP19.97■□□□□ 0.79
MAP1LC3B-206ENST00000564844 CCDC115Q96NT0 180 aa19.97■□□□□ 0.79
MAP1LC3B-206ENST00000564844 NLE1Q9NVX2 485 aaPredicted RBP19.97■□□□□ 0.79
MAP1LC3B-206ENST00000564844 TMEM248Q9NWD8 314 aa19.97■□□□□ 0.79
MAP1LC3B-206ENST00000564844 A0A0C4DFX4 3053 aa19.97■□□□□ 0.79
MAP1LC3B-206ENST00000564844 SMIM30A4D0T7 59 aa19.96■□□□□ 0.79
MAP1LC3B-206ENST00000564844 CXCL11O14625 94 aa19.96■□□□□ 0.79
MAP1LC3B-206ENST00000564844 TNFRSF10BO14763 440 aa19.96■□□□□ 0.79
MAP1LC3B-206ENST00000564844 HOXC11O43248 304 aaPredicted RBP19.96■□□□□ 0.79
MAP1LC3B-206ENST00000564844 PTRHD1Q6GMV3 140 aaKnown RBP19.96■□□□□ 0.79
MAP1LC3B-206ENST00000564844 AFTPHQ6ULP2 937 aa19.96■□□□□ 0.79
MAP1LC3B-206ENST00000564844 CXCL17Q6UXB2 119 aa19.96■□□□□ 0.79
MAP1LC3B-206ENST00000564844 NEK10Q6ZWH5 1172 aa19.96■□□□□ 0.79
MAP1LC3B-206ENST00000564844 NRARPQ7Z6K4 114 aa19.96■□□□□ 0.79
MAP1LC3B-206ENST00000564844 MAL2Q969L2 176 aa19.96■□□□□ 0.79
MAP1LC3B-206ENST00000564844 AASDHPPTQ9NRN7 309 aa19.96■□□□□ 0.79
MAP1LC3B-206ENST00000564844 FAM8A1Q9UBU6 413 aa19.96■□□□□ 0.79
MAP1LC3B-206ENST00000564844 ZNF221Q9UK13 617 aa19.96■□□□□ 0.79
MAP1LC3B-206ENST00000564844 OPN1SWP03999 348 aa19.96■□□□□ 0.79
MAP1LC3B-206ENST00000564844 RPS24P62847 133 aaKnown RBP19.96■□□□□ 0.79
MAP1LC3B-206ENST00000564844 ZMAT1Q5H9K5 638 aa19.96■□□□□ 0.79
MAP1LC3B-206ENST00000564844 ATAD3CQ5T2N8 411 aa19.96■□□□□ 0.79
MAP1LC3B-206ENST00000564844 FAM151BQ6UXP7 276 aa19.96■□□□□ 0.79
MAP1LC3B-206ENST00000564844 DEPDC4Q8N2C3 294 aa19.96■□□□□ 0.79
MAP1LC3B-206ENST00000564844 LKAAEAR1Q8TD35 194 aa19.96■□□□□ 0.79
MAP1LC3B-206ENST00000564844 PPP3R2Q96LZ3 170 aa19.96■□□□□ 0.79
MAP1LC3B-206ENST00000564844 SP140LQ9H930 580 aa19.96■□□□□ 0.79
MAP1LC3B-206ENST00000564844 POPDC3Q9HBV1 291 aa19.96■□□□□ 0.79
MAP1LC3B-206ENST00000564844 PCDHGB6Q9Y5F9 930 aa19.96■□□□□ 0.79
MAP1LC3B-206ENST00000564844 PCDHGB1Q9Y5G3 927 aa19.96■□□□□ 0.79
MAP1LC3B-206ENST00000564844 DNMT3AQ9Y6K1 912 aaPredicted RBP19.96■□□□□ 0.79
MAP1LC3B-206ENST00000564844 DOCK3Q8IZD9 2030 aa19.96■□□□□ 0.79
MAP1LC3B-206ENST00000564844 DYTNA2CJ06 578 aa19.96■□□□□ 0.79
MAP1LC3B-206ENST00000564844 CCRL2O00421 344 aa19.96■□□□□ 0.79
MAP1LC3B-206ENST00000564844 TAPBPO15533 448 aa19.96■□□□□ 0.79
MAP1LC3B-206ENST00000564844 RGS14O43566 566 aa19.96■□□□□ 0.79
MAP1LC3B-206ENST00000564844 F2P00734 622 aa19.96■□□□□ 0.79
MAP1LC3B-206ENST00000564844 NUDT7P0C024 238 aa19.96■□□□□ 0.79
MAP1LC3B-206ENST00000564844 CXCR2P25025 360 aa19.96■□□□□ 0.79
MAP1LC3B-206ENST00000564844 PPP2R2DQ66LE6 453 aa19.96■□□□□ 0.79
MAP1LC3B-206ENST00000564844 SIX5Q8N196 739 aa19.96■□□□□ 0.79
MAP1LC3B-206ENST00000564844 APH1BQ8WW43 257 aa19.96■□□□□ 0.79
MAP1LC3B-206ENST00000564844 CEP19Q96LK0 163 aa19.96■□□□□ 0.79
MAP1LC3B-206ENST00000564844 THUMPD1Q9NXG2 353 aaKnown RBP19.96■□□□□ 0.79
MAP1LC3B-206ENST00000564844 MBLAC1A4D2B0 266 aaPredicted RBP19.95■□□□□ 0.78
MAP1LC3B-206ENST00000564844 M0QX08 132 aa19.95■□□□□ 0.78
MAP1LC3B-206ENST00000564844 OTCP00480 354 aa19.95■□□□□ 0.78
MAP1LC3B-206ENST00000564844 NPRL3Q12980 569 aa19.95■□□□□ 0.78
MAP1LC3B-206ENST00000564844 ANGPTL8Q6UXH0 198 aa19.95■□□□□ 0.78
MAP1LC3B-206ENST00000564844 AADATQ8N5Z0 425 aa19.95■□□□□ 0.78
MAP1LC3B-206ENST00000564844 TMEM246Q9BRR3 403 aa19.95■□□□□ 0.78
MAP1LC3B-206ENST00000564844 TSEN34Q9BSV6 310 aaKnown RBP19.95■□□□□ 0.78
MAP1LC3B-206ENST00000564844 CINPQ9BW66 212 aaPredicted RBP19.95■□□□□ 0.78
MAP1LC3B-206ENST00000564844 MMP27Q9H306 513 aa19.95■□□□□ 0.78
MAP1LC3B-206ENST00000564844 TMEM184CQ9NVA4 438 aa19.95■□□□□ 0.78
MAP1LC3B-206ENST00000564844 GABRQQ9UN88 632 aa19.95■□□□□ 0.78
MAP1LC3B-206ENST00000564844 WDR90Q96KV7 1748 aa19.95■□□□□ 0.78
MAP1LC3B-206ENST00000564844 LOC110117498-PIK3R3F6TDL0 507 aa19.95■□□□□ 0.78
MAP1LC3B-206ENST00000564844 RFXANKO14593 260 aa19.95■□□□□ 0.78
MAP1LC3B-206ENST00000564844 ZW10O43264 779 aa19.95■□□□□ 0.78
MAP1LC3B-206ENST00000564844 PTHP01270 115 aa19.95■□□□□ 0.78
MAP1LC3B-206ENST00000564844 ALPIP09923 528 aa19.95■□□□□ 0.78
MAP1LC3B-206ENST00000564844 IL10RBQ08334 325 aa19.95■□□□□ 0.78
MAP1LC3B-206ENST00000564844 MED22Q15528 200 aa19.95■□□□□ 0.78
MAP1LC3B-206ENST00000564844 KIAA1614Q5VZ46 1190 aa19.95■□□□□ 0.78
MAP1LC3B-206ENST00000564844 KDM4DQ6B0I6 523 aa19.95■□□□□ 0.78
MAP1LC3B-206ENST00000564844 SPATA17Q96L03 361 aa19.95■□□□□ 0.78
MAP1LC3B-206ENST00000564844 DEPDC7Q96QD5 511 aa19.95■□□□□ 0.78
MAP1LC3B-206ENST00000564844 PAQR5Q9NXK6 330 aaPredicted RBP19.95■□□□□ 0.78
MAP1LC3B-206ENST00000564844 MARCH2Q9P0N8 246 aa19.95■□□□□ 0.78
MAP1LC3B-206ENST00000564844 DMC1Q14565 340 aa19.94■□□□□ 0.78
MAP1LC3B-206ENST00000564844 RFX4Q33E94 735 aa19.94■□□□□ 0.78
MAP1LC3B-206ENST00000564844 TRIM60Q495X7 471 aa19.94■□□□□ 0.78
MAP1LC3B-206ENST00000564844 SBSNQ6UWP8 590 aa19.94■□□□□ 0.78
MAP1LC3B-206ENST00000564844 C16orf59Q7L2K0 433 aa19.94■□□□□ 0.78
MAP1LC3B-206ENST00000564844 PRSS48Q7RTY5 328 aa19.94■□□□□ 0.78
MAP1LC3B-206ENST00000564844 CYP4Z2PQ8N1L4 340 aa19.94■□□□□ 0.78
MAP1LC3B-206ENST00000564844 AMER2Q8N7J2 671 aa19.94■□□□□ 0.78
MAP1LC3B-206ENST00000564844 HSH2DQ96JZ2 352 aa19.94■□□□□ 0.78
MAP1LC3B-206ENST00000564844 APOLD1Q96LR9 279 aa19.94■□□□□ 0.78
MAP1LC3B-206ENST00000564844 ABHD16BQ9H3Z7 469 aa19.94■□□□□ 0.78
MAP1LC3B-206ENST00000564844 FBXL12Q9NXK8 326 aa19.94■□□□□ 0.78
MAP1LC3B-206ENST00000564844 TLR6Q9Y2C9 796 aa19.94■□□□□ 0.78
MAP1LC3B-206ENST00000564844 APOA1P02647 267 aa19.94■□□□□ 0.78
MAP1LC3B-206ENST00000564844 CD52P31358 61 aa19.94■□□□□ 0.78
MAP1LC3B-206ENST00000564844 OR1E2P47887 323 aa19.94■□□□□ 0.78
MAP1LC3B-206ENST00000564844 CAMK2GQ13555 558 aaPredicted RBP19.94■□□□□ 0.78
MAP1LC3B-206ENST00000564844 SPANXN2Q5MJ10 180 aa19.94■□□□□ 0.78
MAP1LC3B-206ENST00000564844 SNX20Q7Z614 316 aa19.94■□□□□ 0.78
MAP1LC3B-206ENST00000564844 THEM5Q8N1Q8 247 aa19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms