RNA–Protein interactions for RNA: ENST00000564068.1

COMMD4-209, Transcript of COMM domain containing 4, humanhuman

Gene COMMD4, Length 4,204 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-209ENST00000564068 DNAJB5O75953 348 aa12.32□□□□□ -0.44
COMMD4-209ENST00000564068 IFNW1P05000 195 aa12.32□□□□□ -0.44
COMMD4-209ENST00000564068 ALDH2P05091 517 aa12.32□□□□□ -0.44
COMMD4-209ENST00000564068 NR2F1P10589 423 aa12.32□□□□□ -0.44
COMMD4-209ENST00000564068 GADD45AP24522 165 aa12.32□□□□□ -0.44
COMMD4-209ENST00000564068 NFKB2Q00653 900 aa12.32□□□□□ -0.44
COMMD4-209ENST00000564068 ABHD18Q0P651 414 aa12.32□□□□□ -0.44
COMMD4-209ENST00000564068 PON2Q15165 354 aa12.32□□□□□ -0.44
COMMD4-209ENST00000564068 FBXL22Q6P050 247 aa12.32□□□□□ -0.44
COMMD4-209ENST00000564068 ASB18Q6ZVZ8 466 aa12.32□□□□□ -0.44
COMMD4-209ENST00000564068 GPR142Q7Z601 462 aa12.32□□□□□ -0.44
COMMD4-209ENST00000564068 CLEC14AQ86T13 490 aa12.32□□□□□ -0.44
COMMD4-209ENST00000564068 OR13F1Q8NGS4 319 aa12.32□□□□□ -0.44
COMMD4-209ENST00000564068 PPCDCQ96CD2 204 aa12.32□□□□□ -0.44
COMMD4-209ENST00000564068 TEPSINQ96N21 525 aa12.32□□□□□ -0.44
COMMD4-209ENST00000564068 FRMD6Q96NE9 622 aa12.32□□□□□ -0.44
COMMD4-209ENST00000564068 COL21A1Q96P44 957 aa12.32□□□□□ -0.44
COMMD4-209ENST00000564068 CDK5RAP1Q96SZ6 601 aaKnown RBP12.32□□□□□ -0.44
COMMD4-209ENST00000564068 FNDC11Q9BVV2 318 aa12.32□□□□□ -0.44
COMMD4-209ENST00000564068 UPK3BL1B0FP48 263 aa12.31□□□□□ -0.44
COMMD4-209ENST00000564068 UPK3BL2E5RIL1 263 aa12.31□□□□□ -0.44
COMMD4-209ENST00000564068 ANXA8P13928 327 aa12.31□□□□□ -0.44
COMMD4-209ENST00000564068 PTGS2P35354 604 aa12.31□□□□□ -0.44
COMMD4-209ENST00000564068 FKBP1BP68106 108 aa12.31□□□□□ -0.44
COMMD4-209ENST00000564068 NAE1Q13564 534 aa12.31□□□□□ -0.44
COMMD4-209ENST00000564068 SF3B4Q15427 424 aaKnown RBP eCLIP12.31□□□□□ -0.443e-6■■■■■ 28.5
COMMD4-209ENST00000564068 ZNF181Q2M3W8 571 aa12.31□□□□□ -0.44
COMMD4-209ENST00000564068 CYP27C1Q4G0S4 372 aa12.31□□□□□ -0.44
COMMD4-209ENST00000564068 IFI44LQ53G44 452 aa12.31□□□□□ -0.44
COMMD4-209ENST00000564068 CADM3Q8N126 398 aa12.31□□□□□ -0.44
COMMD4-209ENST00000564068 CHDHQ8NE62 594 aaPredicted RBP12.31□□□□□ -0.44
COMMD4-209ENST00000564068 SIPA1Q96FS4 1042 aa12.31□□□□□ -0.44
COMMD4-209ENST00000564068 CEP295NLQ96MC4 621 aa12.31□□□□□ -0.44
COMMD4-209ENST00000564068 SGK2Q9HBY8 427 aa12.31□□□□□ -0.44
COMMD4-209ENST00000564068 CLCA3PQ9Y6N3 262 aa12.31□□□□□ -0.44
COMMD4-209ENST00000564068 MYO10Q9HD67 2058 aa12.31□□□□□ -0.44
COMMD4-209ENST00000564068 SLITRK5O94991 958 aa12.31□□□□□ -0.44
COMMD4-209ENST00000564068 CDRT1O95170 752 aa12.31□□□□□ -0.44
COMMD4-209ENST00000564068 NPPAP01160 153 aa12.31□□□□□ -0.44
COMMD4-209ENST00000564068 MMP3P08254 477 aa12.31□□□□□ -0.44
COMMD4-209ENST00000564068 MAPK12P53778 367 aa12.31□□□□□ -0.44
COMMD4-209ENST00000564068 GSTM4Q03013 218 aa12.31□□□□□ -0.44
COMMD4-209ENST00000564068 PCBP1Q15365 356 aaKnown RBP eCLIP12.31□□□□□ -0.44
COMMD4-209ENST00000564068 POM121L1PQ3SYA9 428 aa12.31□□□□□ -0.44
COMMD4-209ENST00000564068 ANXA8L1Q5VT79 327 aa12.31□□□□□ -0.44
COMMD4-209ENST00000564068 BHLHB9Q6PI77 547 aa12.31□□□□□ -0.44
COMMD4-209ENST00000564068 MMAAQ8IVH4 418 aaKnown RBP12.31□□□□□ -0.44
COMMD4-209ENST00000564068 HJURPQ8NCD3 748 aaPredicted RBP12.31□□□□□ -0.44
COMMD4-209ENST00000564068 ASPNQ9BXN1 380 aa12.31□□□□□ -0.44
COMMD4-209ENST00000564068 OR2B2Q9GZK3 357 aa12.31□□□□□ -0.44
COMMD4-209ENST00000564068 DNAJC11Q9NVH1 559 aa12.31□□□□□ -0.44
COMMD4-209ENST00000564068 ANKMY1Q9P2S6 941 aa12.31□□□□□ -0.44
COMMD4-209ENST00000564068 CCNB2O95067 398 aa12.31□□□□□ -0.44
COMMD4-209ENST00000564068 HAPLN1P10915 354 aaPredicted RBP12.31□□□□□ -0.44
COMMD4-209ENST00000564068 TACR2P21452 398 aa12.31□□□□□ -0.44
COMMD4-209ENST00000564068 CD72P21854 359 aa12.31□□□□□ -0.44
COMMD4-209ENST00000564068 SERPINA4P29622 427 aa12.31□□□□□ -0.44
COMMD4-209ENST00000564068 OR1E2P47887 323 aa12.31□□□□□ -0.44
COMMD4-209ENST00000564068 RPS24P62847 133 aaKnown RBP12.31□□□□□ -0.44
COMMD4-209ENST00000564068 SPATS1Q496A3 300 aa12.31□□□□□ -0.44
COMMD4-209ENST00000564068 DUSP28Q4G0W2 176 aa12.31□□□□□ -0.44
COMMD4-209ENST00000564068 PPP2R2DQ66LE6 453 aa12.31□□□□□ -0.44
COMMD4-209ENST00000564068 CXorf57Q6NSI4 855 aaKnown RBP12.31□□□□□ -0.44
COMMD4-209ENST00000564068 CERS6Q6ZMG9 384 aa12.31□□□□□ -0.44
COMMD4-209ENST00000564068 CSGALNACT1Q8TDX6 532 aa12.31□□□□□ -0.44
COMMD4-209ENST00000564068 EFHD2Q96C19 240 aaPredicted RBP12.31□□□□□ -0.44
COMMD4-209ENST00000564068 ACBD6Q9BR61 282 aa12.31□□□□□ -0.44
COMMD4-209ENST00000564068 ZBTB20Q9HC78 741 aaPredicted RBP12.31□□□□□ -0.44
COMMD4-209ENST00000564068 KLHL28Q9NXS3 571 aa12.31□□□□□ -0.44
COMMD4-209ENST00000564068 AHSPQ9NZD4 102 aa12.31□□□□□ -0.44
COMMD4-209ENST00000564068 DNMT3LQ9UJW3 386 aa12.31□□□□□ -0.44
COMMD4-209ENST00000564068 KCNE2Q9Y6J6 123 aa12.31□□□□□ -0.44
COMMD4-209ENST00000564068 LTBP3Q9NS15 1303 aa12.3□□□□□ -0.44
COMMD4-209ENST00000564068 SMIM35A0A1B0GVV1 85 aa12.3□□□□□ -0.44
COMMD4-209ENST00000564068 FAM172BPA6NC97 362 aa12.3□□□□□ -0.44
COMMD4-209ENST00000564068 NUAK1O60285 661 aa12.3□□□□□ -0.44
COMMD4-209ENST00000564068 HPRP00739 348 aa12.3□□□□□ -0.44
COMMD4-209ENST00000564068 SLC2A2P11168 524 aaPredicted RBP12.3□□□□□ -0.44
COMMD4-209ENST00000564068 CKMT1AP12532 417 aa12.3□□□□□ -0.44
COMMD4-209ENST00000564068 CD40LGP29965 261 aa12.3□□□□□ -0.44
COMMD4-209ENST00000564068 BUD31P41223 144 aaPredicted RBP12.3□□□□□ -0.44
COMMD4-209ENST00000564068 SNRPD2P62316 118 aaKnown RBP12.3□□□□□ -0.44
COMMD4-209ENST00000564068 CACNG1Q06432 222 aa12.3□□□□□ -0.44
COMMD4-209ENST00000564068 LGALS3BPQ08380 585 aa12.3□□□□□ -0.44
COMMD4-209ENST00000564068 STX4Q12846 297 aa12.3□□□□□ -0.44
COMMD4-209ENST00000564068 SMN1Q16637 294 aaKnown RBP12.3□□□□□ -0.44
COMMD4-209ENST00000564068 VTCN1Q7Z7D3 282 aa12.3□□□□□ -0.44
COMMD4-209ENST00000564068 PEX5LQ8IYB4 626 aa12.3□□□□□ -0.44
COMMD4-209ENST00000564068 FAM110BQ8TC76 370 aa12.3□□□□□ -0.44
COMMD4-209ENST00000564068 XAGE5Q8WWM1 108 aa12.3□□□□□ -0.44
COMMD4-209ENST00000564068 MAF1Q9H063 256 aa12.3□□□□□ -0.44
COMMD4-209ENST00000564068 DUS2Q9NX74 493 aaKnown RBP12.3□□□□□ -0.44
COMMD4-209ENST00000564068 MIOSQ9NXC5 875 aa12.3□□□□□ -0.44
COMMD4-209ENST00000564068 COQ3Q9NZJ6 369 aa12.3□□□□□ -0.44
COMMD4-209ENST00000564068 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.3□□□□□ -0.44
COMMD4-209ENST00000564068 FAM47E-STBD1D6RA91 191 aa12.3□□□□□ -0.44
COMMD4-209ENST00000564068 MAFKO60675 156 aa12.3□□□□□ -0.44
COMMD4-209ENST00000564068 USP45Q70EL2 814 aa12.3□□□□□ -0.44
COMMD4-209ENST00000564068 AMIGO1Q86WK6 493 aa12.3□□□□□ -0.44
COMMD4-209ENST00000564068 TRIT1Q9H3H1 467 aaKnown RBP12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms