RNA–Protein interactions for RNA: ENST00000563790.5

HDGFL3-204, Transcript of HDGF like 3, humanhuman

TSL 3

Gene HDGFL3, Length 934 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-204ENST00000563790 FAM234BA2RU67 622 aa9.93□□□□□ -0.82
HDGFL3-204ENST00000563790 ELOA3DA6NLF2 546 aaPredicted RBP9.93□□□□□ -0.82
HDGFL3-204ENST00000563790 FAM72CH0Y354 149 aa9.93□□□□□ -0.82
HDGFL3-204ENST00000563790 BTN3A3O00478 584 aa9.93□□□□□ -0.82
HDGFL3-204ENST00000563790 BTN3A1O00481 513 aa9.93□□□□□ -0.82
HDGFL3-204ENST00000563790 PEX1O43933 1283 aa9.93□□□□□ -0.82
HDGFL3-204ENST00000563790 KCNJ13O60928 360 aa9.93□□□□□ -0.82
HDGFL3-204ENST00000563790 LRIG2O94898 1065 aa9.93□□□□□ -0.82
HDGFL3-204ENST00000563790 SLC25A14O95258 325 aaPredicted RBP9.93□□□□□ -0.82
HDGFL3-204ENST00000563790 CTPS1P17812 591 aa9.93□□□□□ -0.82
HDGFL3-204ENST00000563790 TBXAS1P24557 533 aaPredicted RBP9.93□□□□□ -0.82
HDGFL3-204ENST00000563790 TIMP3P35625 211 aa9.93□□□□□ -0.82
HDGFL3-204ENST00000563790 FANCCQ00597 558 aa9.93□□□□□ -0.82
HDGFL3-204ENST00000563790 XRCC4Q13426 336 aa9.93□□□□□ -0.82
HDGFL3-204ENST00000563790 CR1LQ2VPA4 569 aa9.93□□□□□ -0.82
HDGFL3-204ENST00000563790 BTBD16Q32M84 506 aa9.93□□□□□ -0.82
HDGFL3-204ENST00000563790 ELOA3BQ3SY89 546 aa9.93□□□□□ -0.82
HDGFL3-204ENST00000563790 FAM72AQ5TYM5 149 aa9.93□□□□□ -0.82
HDGFL3-204ENST00000563790 FAM72DQ6L9T8 149 aa9.93□□□□□ -0.82
HDGFL3-204ENST00000563790 TMEM205Q6UW68 189 aa9.93□□□□□ -0.82
HDGFL3-204ENST00000563790 FAM183BPQ6ZVS7 135 aa9.93□□□□□ -0.82
HDGFL3-204ENST00000563790 PEG10Q86TG7 708 aaKnown RBP9.93□□□□□ -0.82
HDGFL3-204ENST00000563790 FAM72BQ86X60 149 aa9.93□□□□□ -0.82
HDGFL3-204ENST00000563790 BANPQ8N9N5 519 aa9.93□□□□□ -0.82
HDGFL3-204ENST00000563790 ZNF397Q8NF99 534 aaPredicted RBP9.93□□□□□ -0.82
HDGFL3-204ENST00000563790 ELOA3Q8NG57 546 aa9.93□□□□□ -0.82
HDGFL3-204ENST00000563790 TBC1D31Q96DN5 1066 aa9.93□□□□□ -0.82
HDGFL3-204ENST00000563790 PAGE5Q96GU1 130 aa9.93□□□□□ -0.82
HDGFL3-204ENST00000563790 SCYL1Q96KG9 808 aa9.93□□□□□ -0.82
HDGFL3-204ENST00000563790 THAP2Q9H0W7 228 aa9.93□□□□□ -0.82
HDGFL3-204ENST00000563790 SRMSQ9H3Y6 488 aa9.93□□□□□ -0.82
HDGFL3-204ENST00000563790 KCNK13Q9HB14 408 aa9.93□□□□□ -0.82
HDGFL3-204ENST00000563790 ALKBH4Q9NXW9 302 aa9.93□□□□□ -0.82
HDGFL3-204ENST00000563790 LAMP3Q9UQV4 416 aa9.93□□□□□ -0.82
HDGFL3-204ENST00000563790 LIPGQ9Y5X9 500 aa9.93□□□□□ -0.82
HDGFL3-204ENST00000563790 MAU2Q9Y6X3 613 aa9.93□□□□□ -0.82
HDGFL3-204ENST00000563790 DNAH7Q8WXX0 4024 aa9.93□□□□□ -0.82
HDGFL3-204ENST00000563790 HEATR5BQ9P2D3 2071 aa9.92□□□□□ -0.82
HDGFL3-204ENST00000563790 C2orf74A8MZ97 194 aa9.92□□□□□ -0.82
HDGFL3-204ENST00000563790 ITGA10O75578 1167 aa9.92□□□□□ -0.82
HDGFL3-204ENST00000563790 PDIA4P13667 645 aaKnown RBP9.92□□□□□ -0.82
HDGFL3-204ENST00000563790 GGT5P36269 586 aa9.92□□□□□ -0.82
HDGFL3-204ENST00000563790 LIMS1P48059 325 aa9.92□□□□□ -0.82
HDGFL3-204ENST00000563790 CYB561P49447 251 aa9.92□□□□□ -0.82
HDGFL3-204ENST00000563790 FOXL1Q12952 345 aa9.92□□□□□ -0.82
HDGFL3-204ENST00000563790 SIX1Q15475 284 aaPredicted RBP9.92□□□□□ -0.82
HDGFL3-204ENST00000563790 TAZQ16635 292 aa9.92□□□□□ -0.82
HDGFL3-204ENST00000563790 SLC25A52Q3SY17 297 aa9.92□□□□□ -0.82
HDGFL3-204ENST00000563790 SPESP1Q6UW49 350 aa9.92□□□□□ -0.82
HDGFL3-204ENST00000563790 ARHGEF18Q6ZSZ5 1173 aa9.92□□□□□ -0.82
HDGFL3-204ENST00000563790 C11orf57Q6ZUT1 292 aaPredicted RBP9.92□□□□□ -0.82
HDGFL3-204ENST00000563790 TRILQ7L0X0 811 aa9.92□□□□□ -0.82
HDGFL3-204ENST00000563790 BNIPLQ7Z465 357 aa9.92□□□□□ -0.82
HDGFL3-204ENST00000563790 MILR1Q7Z6M3 343 aa9.92□□□□□ -0.82
HDGFL3-204ENST00000563790 METTL27Q8N6F8 245 aaPredicted RBP9.92□□□□□ -0.82
HDGFL3-204ENST00000563790 RTL3Q8N8U3 475 aaKnown RBP9.92□□□□□ -0.82
HDGFL3-204ENST00000563790 ZNF441Q8N8Z8 693 aa9.92□□□□□ -0.82
HDGFL3-204ENST00000563790 SARAFQ96BY9 339 aa9.92□□□□□ -0.82
HDGFL3-204ENST00000563790 CPXM1Q96SM3 734 aa9.92□□□□□ -0.82
HDGFL3-204ENST00000563790 INSM2Q96T92 566 aaPredicted RBP9.92□□□□□ -0.82
HDGFL3-204ENST00000563790 CINPQ9BW66 212 aaPredicted RBP9.92□□□□□ -0.82
HDGFL3-204ENST00000563790 RASSF4Q9H2L5 321 aa9.92□□□□□ -0.82
HDGFL3-204ENST00000563790 UPF2Q9HAU5 1272 aaKnown RBP9.92□□□□□ -0.82
HDGFL3-204ENST00000563790 STAU2Q9NUL3 570 aaKnown RBP eCLIP9.92□□□□□ -0.82
HDGFL3-204ENST00000563790 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.92□□□□□ -0.82
HDGFL3-204ENST00000563790 DTLQ9NZJ0 730 aa9.92□□□□□ -0.82
HDGFL3-204ENST00000563790 ACSL5Q9ULC5 683 aa9.92□□□□□ -0.82
HDGFL3-204ENST00000563790 PCDHB4Q9Y5E5 795 aa9.92□□□□□ -0.82
HDGFL3-204ENST00000563790 PCDHGB3Q9Y5G1 929 aa9.92□□□□□ -0.82
HDGFL3-204ENST00000563790 HS3ST1O14792 307 aa9.91□□□□□ -0.82
HDGFL3-204ENST00000563790 PGLSO95336 258 aa9.91□□□□□ -0.82
HDGFL3-204ENST00000563790 KRT13P13646 458 aa9.91□□□□□ -0.82
HDGFL3-204ENST00000563790 AMPD1P23109 780 aa9.91□□□□□ -0.82
HDGFL3-204ENST00000563790 NR2F2P24468 414 aa9.91□□□□□ -0.82
HDGFL3-204ENST00000563790 EPHB2P29323 1055 aa9.91□□□□□ -0.82
HDGFL3-204ENST00000563790 SRP14P37108 136 aaKnown RBP9.91□□□□□ -0.82
HDGFL3-204ENST00000563790 PPIAP62937 165 aaKnown RBP9.91□□□□□ -0.82
HDGFL3-204ENST00000563790 TRAF2Q12933 501 aa9.91□□□□□ -0.82
HDGFL3-204ENST00000563790 DAAM2Q86T65 1068 aa9.91□□□□□ -0.82
HDGFL3-204ENST00000563790 FAM131BQ86XD5 332 aa9.91□□□□□ -0.82
HDGFL3-204ENST00000563790 DTWD1Q8N5C7 304 aa9.91□□□□□ -0.82
HDGFL3-204ENST00000563790 SLC5A8Q8N695 610 aa9.91□□□□□ -0.82
HDGFL3-204ENST00000563790 LCN9Q8WX39 176 aa9.91□□□□□ -0.82
HDGFL3-204ENST00000563790 ZDHHC16Q969W1 377 aa9.91□□□□□ -0.82
HDGFL3-204ENST00000563790 C12orf66Q96MD2 445 aa9.91□□□□□ -0.82
HDGFL3-204ENST00000563790 BHLHE41Q9C0J9 482 aaPredicted RBP9.91□□□□□ -0.82
HDGFL3-204ENST00000563790 MMP27Q9H306 513 aa9.91□□□□□ -0.82
HDGFL3-204ENST00000563790 EPB41L4BQ9H329 900 aa9.91□□□□□ -0.82
HDGFL3-204ENST00000563790 FAM83DQ9H4H8 585 aa9.91□□□□□ -0.82
HDGFL3-204ENST00000563790 BARX1Q9HBU1 254 aaPredicted RBP9.91□□□□□ -0.82
HDGFL3-204ENST00000563790 ZNF304Q9HCX3 659 aa9.91□□□□□ -0.82
HDGFL3-204ENST00000563790 EXOC1Q9NV70 894 aa9.91□□□□□ -0.82
HDGFL3-204ENST00000563790 TRMT1Q9NXH9 659 aaKnown RBP9.91□□□□□ -0.82
HDGFL3-204ENST00000563790 EURLQ9NYK6 297 aa9.91□□□□□ -0.82
HDGFL3-204ENST00000563790 HPSEQ9Y251 543 aa9.91□□□□□ -0.82
HDGFL3-204ENST00000563790 COQ4Q9Y3A0 265 aa9.91□□□□□ -0.82
HDGFL3-204ENST00000563790 EXPH5Q8NEV8 1989 aa9.91□□□□□ -0.82
HDGFL3-204ENST00000563790 SUSD5O60279 629 aa9.9□□□□□ -0.82
HDGFL3-204ENST00000563790 SEC24DO94855 1032 aaPredicted RBP9.9□□□□□ -0.82
HDGFL3-204ENST00000563790 IL2RAP01589 272 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms