RNA–Protein interactions for RNA: ENST00000563283.1

CNOT1-205, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-205ENST00000563283 COQ10AQ96MF6 247 aa5.06□□□□□ -1.6
CNOT1-205ENST00000563283 LENG8Q96PV6 779 aaPredicted RBP5.06□□□□□ -1.6
CNOT1-205ENST00000563283 MCCC1Q96RQ3 725 aaPredicted RBP5.06□□□□□ -1.6
CNOT1-205ENST00000563283 NEU1Q99519 415 aa5.06□□□□□ -1.6
CNOT1-205ENST00000563283 MYOCQ99972 504 aa5.06□□□□□ -1.6
CNOT1-205ENST00000563283 GTPBP2Q9BX10 602 aaKnown RBP5.06□□□□□ -1.6
CNOT1-205ENST00000563283 GAREM1Q9H706 876 aa5.06□□□□□ -1.6
CNOT1-205ENST00000563283 EPB41L5Q9HCM4 733 aa5.06□□□□□ -1.6
CNOT1-205ENST00000563283 TMEM9BQ9NQ34 198 aa5.06□□□□□ -1.6
CNOT1-205ENST00000563283 EIF2B3Q9NR50 452 aaKnown RBP5.06□□□□□ -1.6
CNOT1-205ENST00000563283 ANAPC5Q9UJX4 755 aa5.06□□□□□ -1.6
CNOT1-205ENST00000563283 RPL26L1Q9UNX3 145 aaKnown RBP5.06□□□□□ -1.6
CNOT1-205ENST00000563283 SHOC2Q9UQ13 582 aa5.06□□□□□ -1.6
CNOT1-205ENST00000563283 COL27A1Q8IZC6 1860 aaPredicted RBP5.06□□□□□ -1.6
CNOT1-205ENST00000563283 LAMA5O15230 3695 aa5.06□□□□□ -1.6
CNOT1-205ENST00000563283 PCNX2A6NKB5 2137 aa5.06□□□□□ -1.6
CNOT1-205ENST00000563283 CNOT1A5YKK6 2376 aaKnown RBP5.06□□□□□ -1.6
CNOT1-205ENST00000563283 TDRD6O60522 2096 aaKnown RBP5.06□□□□□ -1.6
CNOT1-205ENST00000563283 MYLKQ15746 1914 aa5.05□□□□□ -1.6
CNOT1-205ENST00000563283 PLXNB3Q9ULL4 1909 aa5.05□□□□□ -1.6
CNOT1-205ENST00000563283 A0A0J9YYE9 177 aa5.05□□□□□ -1.6
CNOT1-205ENST00000563283 C1orf232A0A0U1RR37 186 aa5.05□□□□□ -1.6
CNOT1-205ENST00000563283 A0A1B0GTQ1 180 aa5.05□□□□□ -1.6
CNOT1-205ENST00000563283 LOC285095A0A1B0GVY8 99 aa5.05□□□□□ -1.6
CNOT1-205ENST00000563283 A0A1W2PQ67 120 aa5.05□□□□□ -1.6
CNOT1-205ENST00000563283 CCDC78A2IDD5 438 aa5.05□□□□□ -1.6
CNOT1-205ENST00000563283 CAPN8A6NHC0 703 aa5.05□□□□□ -1.6
CNOT1-205ENST00000563283 ANKRD66B4E2M5 251 aa5.05□□□□□ -1.6
CNOT1-205ENST00000563283 PRAMEF26H0Y7S4 382 aa5.05□□□□□ -1.6
CNOT1-205ENST00000563283 NDC80O14777 642 aa5.05□□□□□ -1.6
CNOT1-205ENST00000563283 CASC3O15234 703 aaKnown RBP5.05□□□□□ -1.6
CNOT1-205ENST00000563283 GPR39O43194 453 aa5.05□□□□□ -1.6
CNOT1-205ENST00000563283 TSPAN6O43657 245 aa5.05□□□□□ -1.6
CNOT1-205ENST00000563283 PPFIA2O75334 1257 aa5.05□□□□□ -1.6
CNOT1-205ENST00000563283 SUN1O94901 812 aa5.05□□□□□ -1.6
CNOT1-205ENST00000563283 KCNK5O95279 499 aa5.05□□□□□ -1.6
CNOT1-205ENST00000563283 SOD1P00441 154 aa5.05□□□□□ -1.6
CNOT1-205ENST00000563283 EPOP01588 193 aa5.05□□□□□ -1.6
CNOT1-205ENST00000563283 TRBC1P01850 177 aa5.05□□□□□ -1.6
CNOT1-205ENST00000563283 CYP2A6P11509 494 aaPredicted RBP5.05□□□□□ -1.6
CNOT1-205ENST00000563283 BMP5P22003 454 aa5.05□□□□□ -1.6
CNOT1-205ENST00000563283 NFKBIAP25963 317 aa5.05□□□□□ -1.6
CNOT1-205ENST00000563283 IVDP26440 423 aa5.05□□□□□ -1.6
CNOT1-205ENST00000563283 RXRGP48443 463 aa5.05□□□□□ -1.6
CNOT1-205ENST00000563283 PLTPP55058 493 aa5.05□□□□□ -1.6
CNOT1-205ENST00000563283 SCAND1P57086 179 aa5.05□□□□□ -1.6
CNOT1-205ENST00000563283 RPS21P63220 83 aaKnown RBP5.05□□□□□ -1.6
CNOT1-205ENST00000563283 CRADDP78560 199 aa5.05□□□□□ -1.6
CNOT1-205ENST00000563283 CDK16Q00536 496 aa5.05□□□□□ -1.6
CNOT1-205ENST00000563283 CCDC15Q0P6D6 951 aa5.05□□□□□ -1.6
CNOT1-205ENST00000563283 CDH17Q12864 832 aa5.05□□□□□ -1.6
CNOT1-205ENST00000563283 EIF2B5Q13144 721 aaKnown RBP5.05□□□□□ -1.6
CNOT1-205ENST00000563283 MSLNQ13421 630 aaPredicted RBP5.05□□□□□ -1.6
CNOT1-205ENST00000563283 ARHGEF7Q14155 803 aa5.05□□□□□ -1.6
CNOT1-205ENST00000563283 POU6F1Q14863 301 aa5.05□□□□□ -1.6
CNOT1-205ENST00000563283 MORF4L2Q15014 288 aa5.05□□□□□ -1.6
CNOT1-205ENST00000563283 CNGA3Q16281 694 aa5.05□□□□□ -1.6
CNOT1-205ENST00000563283 UAP1L1Q3KQV9 507 aa5.05□□□□□ -1.6
CNOT1-205ENST00000563283 CCDC38Q502W7 563 aa5.05□□□□□ -1.6
CNOT1-205ENST00000563283 ZNF542PQ5EBM4 170 aa5.05□□□□□ -1.6
CNOT1-205ENST00000563283 TOR2AQ5JU69 321 aa5.05□□□□□ -1.6
CNOT1-205ENST00000563283 CERCAMQ5T4B2 595 aa5.05□□□□□ -1.6
CNOT1-205ENST00000563283 RNASEH2BQ5TBB1 312 aaKnown RBP5.05□□□□□ -1.6
CNOT1-205ENST00000563283 N4BP2L1Q5TBK1 243 aaPredicted RBP5.05□□□□□ -1.6
CNOT1-205ENST00000563283 AGAP9Q5VTM2 703 aa5.05□□□□□ -1.6
CNOT1-205ENST00000563283 HIBCHQ6NVY1 386 aaPredicted RBP5.05□□□□□ -1.6
CNOT1-205ENST00000563283 CASC4Q6P4E1 433 aa5.05□□□□□ -1.6
CNOT1-205ENST00000563283 ZDHHC24Q6UX98 284 aa5.05□□□□□ -1.6
CNOT1-205ENST00000563283 RANBP10Q6VN20 620 aa5.05□□□□□ -1.6
CNOT1-205ENST00000563283 Q6ZSR6 202 aa5.05□□□□□ -1.6
CNOT1-205ENST00000563283 LHFPL2Q6ZUX7 228 aa5.05□□□□□ -1.6
CNOT1-205ENST00000563283 ZNF534Q76KX8 674 aa5.05□□□□□ -1.6
CNOT1-205ENST00000563283 DPPA4Q7L190 304 aa5.05□□□□□ -1.6
CNOT1-205ENST00000563283 GLT6D1Q7Z4J2 308 aa5.05□□□□□ -1.6
CNOT1-205ENST00000563283 TECPR1Q7Z6L1 1165 aa5.05□□□□□ -1.6
CNOT1-205ENST00000563283 PCGF5Q86SE9 256 aa5.05□□□□□ -1.6
CNOT1-205ENST00000563283 HOOK3Q86VS8 718 aa5.05□□□□□ -1.6
CNOT1-205ENST00000563283 CCDC25Q86WR0 208 aa5.05□□□□□ -1.6
CNOT1-205ENST00000563283 GATAD2AQ86YP4 633 aa5.05□□□□□ -1.6
CNOT1-205ENST00000563283 KLHDC8BQ8IXV7 354 aa5.05□□□□□ -1.6
CNOT1-205ENST00000563283 IFT20Q8IY31 132 aa5.05□□□□□ -1.6
CNOT1-205ENST00000563283 NAT8LQ8N9F0 302 aa5.05□□□□□ -1.6
CNOT1-205ENST00000563283 MCUQ8NE86 351 aa5.05□□□□□ -1.6
CNOT1-205ENST00000563283 DEFB124Q8NES8 71 aa5.05□□□□□ -1.6
CNOT1-205ENST00000563283 CXorf40AQ8TE69 158 aa5.05□□□□□ -1.6
CNOT1-205ENST00000563283 SAP25Q8TEE9 199 aa5.05□□□□□ -1.6
CNOT1-205ENST00000563283 IFT81Q8WYA0 676 aa5.05□□□□□ -1.6
CNOT1-205ENST00000563283 RAB7BQ96AH8 199 aa5.05□□□□□ -1.6
CNOT1-205ENST00000563283 SCRN2Q96FV2 425 aa5.05□□□□□ -1.6
CNOT1-205ENST00000563283 SERPINB12Q96P63 405 aa5.05□□□□□ -1.6
CNOT1-205ENST00000563283 NUSAP1Q9BXS6 441 aaKnown RBP5.05□□□□□ -1.6
CNOT1-205ENST00000563283 GPR63Q9BZJ6 419 aa5.05□□□□□ -1.6
CNOT1-205ENST00000563283 TCEAL2Q9H3H9 227 aaPredicted RBP5.05□□□□□ -1.6
CNOT1-205ENST00000563283 XAB2Q9HCS7 855 aaKnown RBP5.05□□□□□ -1.6
CNOT1-205ENST00000563283 CASS4Q9NQ75 786 aa5.05□□□□□ -1.6
CNOT1-205ENST00000563283 FAM114A2Q9NRY5 505 aa5.05□□□□□ -1.6
CNOT1-205ENST00000563283 TM7SF3Q9NS93 570 aa5.05□□□□□ -1.6
CNOT1-205ENST00000563283 C14orf119Q9NWQ9 140 aa5.05□□□□□ -1.6
CNOT1-205ENST00000563283 GRHL1Q9NZI5 618 aa5.05□□□□□ -1.6
CNOT1-205ENST00000563283 PHTF1Q9UMS5 762 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms