RNA–Protein interactions for RNA: ENST00000562806.1

CHD9-207, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 400 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-207ENST00000562806 FYNP06241 537 aa2.57□□□□□ -2
CHD9-207ENST00000562806 SLC2A2P11168 524 aaPredicted RBP2.57□□□□□ -2
CHD9-207ENST00000562806 IL11P20809 199 aa2.57□□□□□ -2
CHD9-207ENST00000562806 SP100P23497 879 aaPredicted RBP2.57□□□□□ -2
CHD9-207ENST00000562806 HLA-FP30511 346 aa2.57□□□□□ -2
CHD9-207ENST00000562806 PTGER4P35408 488 aa2.57□□□□□ -2
CHD9-207ENST00000562806 CCR10P46092 362 aa2.57□□□□□ -2
CHD9-207ENST00000562806 CLK1P49759 484 aaKnown RBP2.57□□□□□ -2
CHD9-207ENST00000562806 MAPK12P53778 367 aa2.57□□□□□ -2
CHD9-207ENST00000562806 AIMP1Q12904 312 aaKnown RBP2.57□□□□□ -2
CHD9-207ENST00000562806 SGCGQ13326 291 aa2.57□□□□□ -2
CHD9-207ENST00000562806 ERMARDQ5T6L9 678 aa2.57□□□□□ -2
CHD9-207ENST00000562806 KRT39Q6A163 491 aa2.57□□□□□ -2
CHD9-207ENST00000562806 NOTUMQ6P988 496 aa2.57□□□□□ -2
CHD9-207ENST00000562806 ZNF497Q6ZNH5 498 aa2.57□□□□□ -2
CHD9-207ENST00000562806 NUP54Q7Z3B4 507 aa2.57□□□□□ -2
CHD9-207ENST00000562806 ARHGAP22Q7Z5H3 698 aa2.57□□□□□ -2
CHD9-207ENST00000562806 CENPVQ7Z7K6 275 aaPredicted RBP2.57□□□□□ -2
CHD9-207ENST00000562806 TMPRSS11BQ86T26 416 aa2.57□□□□□ -2
CHD9-207ENST00000562806 RTN4RL2Q86UN3 420 aa2.57□□□□□ -2
CHD9-207ENST00000562806 MYPOPQ86VE0 399 aaPredicted RBP2.57□□□□□ -2
CHD9-207ENST00000562806 HOGA1Q86XE5 327 aa2.57□□□□□ -2
CHD9-207ENST00000562806 LACC1Q8IV20 430 aa2.57□□□□□ -2
CHD9-207ENST00000562806 ZNF440Q8IYI8 595 aa2.57□□□□□ -2
CHD9-207ENST00000562806 LGI2Q8N0V4 545 aa2.57□□□□□ -2
CHD9-207ENST00000562806 OR4K1Q8NGD4 311 aa2.57□□□□□ -2
CHD9-207ENST00000562806 ROBO4Q8WZ75 1007 aa2.57□□□□□ -2
CHD9-207ENST00000562806 FEVQ99581 238 aa2.57□□□□□ -2
CHD9-207ENST00000562806 RBM4BQ9BQ04 359 aaKnown RBP2.57□□□□□ -2
CHD9-207ENST00000562806 SLF1Q9BQI6 1058 aa2.57□□□□□ -2
CHD9-207ENST00000562806 SYT11Q9BT88 431 aa2.57□□□□□ -2
CHD9-207ENST00000562806 PRRG4Q9BZD6 226 aa2.57□□□□□ -2
CHD9-207ENST00000562806 WWTR1Q9GZV5 400 aa2.57□□□□□ -2
CHD9-207ENST00000562806 GOLPH3LQ9H4A5 285 aa2.57□□□□□ -2
CHD9-207ENST00000562806 ATP13A3Q9H7F0 1226 aa2.57□□□□□ -2
CHD9-207ENST00000562806 CDH20Q9HBT6 801 aa2.57□□□□□ -2
CHD9-207ENST00000562806 Q9N2K0 584 aa2.57□□□□□ -2
CHD9-207ENST00000562806 BCCIPQ9P287 314 aaKnown RBP eCLIP2.57□□□□□ -2
CHD9-207ENST00000562806 TNNQ9UQP3 1299 aa2.57□□□□□ -2
CHD9-207ENST00000562806 MMP24Q9Y5R2 645 aa2.57□□□□□ -2
CHD9-207ENST00000562806 A0A1B0GU03 582 aa2.56□□□□□ -2
CHD9-207ENST00000562806 FEZF1A0PJY2 475 aa2.56□□□□□ -2
CHD9-207ENST00000562806 C15orf61A6NNL5 157 aa2.56□□□□□ -2
CHD9-207ENST00000562806 HSP90AA1P07900 732 aaKnown RBP2.56□□□□□ -2
CHD9-207ENST00000562806 SMIM18P0DKX4 95 aa2.56□□□□□ -2
CHD9-207ENST00000562806 EPCAMP16422 314 aa2.56□□□□□ -2
CHD9-207ENST00000562806 JAK1P23458 1154 aa2.56□□□□□ -2
CHD9-207ENST00000562806 HSD17B3P37058 310 aa2.56□□□□□ -2
CHD9-207ENST00000562806 RAD52P43351 418 aa2.56□□□□□ -2
CHD9-207ENST00000562806 TSFMP43897 325 aaKnown RBP2.56□□□□□ -2
CHD9-207ENST00000562806 VAMP7P51809 220 aa2.56□□□□□ -2
CHD9-207ENST00000562806 PAX9P55771 341 aa2.56□□□□□ -2
CHD9-207ENST00000562806 TAF10Q12962 218 aa2.56□□□□□ -2
CHD9-207ENST00000562806 RALGDSQ12967 914 aa2.56□□□□□ -2
CHD9-207ENST00000562806 SLC1A5Q15758 541 aa2.56□□□□□ -2
CHD9-207ENST00000562806 TMEM266Q2M3C6 531 aa2.56□□□□□ -2
CHD9-207ENST00000562806 VWC2Q2TAL6 325 aa2.56□□□□□ -2
CHD9-207ENST00000562806 LETM2Q2VYF4 491 aa2.56□□□□□ -2
CHD9-207ENST00000562806 PHLDA2Q53GA4 152 aa2.56□□□□□ -2
CHD9-207ENST00000562806 SPDYCQ5MJ68 293 aa2.56□□□□□ -2
CHD9-207ENST00000562806 C6orf163Q5TEZ5 329 aa2.56□□□□□ -2
CHD9-207ENST00000562806 OR4A47Q6IF82 309 aa2.56□□□□□ -2
CHD9-207ENST00000562806 UGT3A1Q6NUS8 523 aa2.56□□□□□ -2
CHD9-207ENST00000562806 SLC25A47Q6Q0C1 308 aa2.56□□□□□ -2
CHD9-207ENST00000562806 CHST3Q7LGC8 479 aa2.56□□□□□ -2
CHD9-207ENST00000562806 LRRTM1Q86UE6 522 aa2.56□□□□□ -2
CHD9-207ENST00000562806 GTSCR1Q86UQ5 136 aa2.56□□□□□ -2
CHD9-207ENST00000562806 LYG1Q8N1E2 194 aa2.56□□□□□ -2
CHD9-207ENST00000562806 FAM89BQ8N5H3 189 aa2.56□□□□□ -2
CHD9-207ENST00000562806 MAPK1IP1LQ8NDC0 245 aa2.56□□□□□ -2
CHD9-207ENST00000562806 KBTBD8Q8NFY9 601 aa2.56□□□□□ -2
CHD9-207ENST00000562806 OR11H4Q8NGC9 324 aa2.56□□□□□ -2
CHD9-207ENST00000562806 OR5T2Q8NGG2 359 aa2.56□□□□□ -2
CHD9-207ENST00000562806 OR6S1Q8NH40 331 aa2.56□□□□□ -2
CHD9-207ENST00000562806 SNRNP27Q8WVK2 155 aaKnown RBP2.56□□□□□ -2
CHD9-207ENST00000562806 SLCO2A1Q92959 643 aa2.56□□□□□ -2
CHD9-207ENST00000562806 ZNF689Q96CS4 500 aaPredicted RBP2.56□□□□□ -2
CHD9-207ENST00000562806 PRAC1Q96KF2 57 aa2.56□□□□□ -2
CHD9-207ENST00000562806 C10orf90Q96M02 699 aa2.56□□□□□ -2
CHD9-207ENST00000562806 NSMCE3Q96MG7 304 aa2.56□□□□□ -2
CHD9-207ENST00000562806 LPAR4Q99677 370 aa2.56□□□□□ -2
CHD9-207ENST00000562806 RABEP2Q9H5N1 569 aa2.56□□□□□ -2
CHD9-207ENST00000562806 CNOT10Q9H9A5 744 aaKnown RBP2.56□□□□□ -2
CHD9-207ENST00000562806 GSN-AS1Q9NRJ2 163 aa2.56□□□□□ -2
CHD9-207ENST00000562806 TBC1D7Q9P0N9 293 aa2.56□□□□□ -2
CHD9-207ENST00000562806 TXNDC16Q9P2K2 825 aa2.56□□□□□ -2
CHD9-207ENST00000562806 EPHA6Q9UF33 1036 aa2.56□□□□□ -2
CHD9-207ENST00000562806 PA2G4Q9UQ80 394 aaKnown RBP2.56□□□□□ -2
CHD9-207ENST00000562806 CHKBQ9Y259 395 aa2.56□□□□□ -2
CHD9-207ENST00000562806 RPS6KL1Q9Y6S9 549 aa2.56□□□□□ -2
CHD9-207ENST00000562806 TRAV24A0A0B4J272 114 aa2.55□□□□□ -2
CHD9-207ENST00000562806 TRIM77I1YAP6 450 aa2.55□□□□□ -2
CHD9-207ENST00000562806 SNX3O60493 162 aa2.55□□□□□ -2
CHD9-207ENST00000562806 RPS6KA5O75582 802 aa2.55□□□□□ -2
CHD9-207ENST00000562806 SEC24AO95486 1093 aa2.55□□□□□ -2
CHD9-207ENST00000562806 ATP5BP06576 529 aaKnown RBP2.55□□□□□ -2
CHD9-207ENST00000562806 LDHCP07864 332 aa2.55□□□□□ -2
CHD9-207ENST00000562806 AKR1B1P15121 316 aa2.55□□□□□ -2
CHD9-207ENST00000562806 ERCC2P18074 760 aa2.55□□□□□ -2
CHD9-207ENST00000562806 UGT1A4P22310 534 aa2.55□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms