RNA–Protein interactions for RNA: ENST00000561242.1

TPM1-229, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-229ENST00000561242 AIF1LQ9BQI0 150 aa10.34□□□□□ -0.75
TPM1-229ENST00000561242 CENPKQ9BS16 269 aa10.34□□□□□ -0.75
TPM1-229ENST00000561242 DDA1Q9BW61 102 aa10.34□□□□□ -0.75
TPM1-229ENST00000561242 ULBP3Q9BZM4 244 aa10.34□□□□□ -0.75
TPM1-229ENST00000561242 B3GNT4Q9C0J1 378 aa10.34□□□□□ -0.75
TPM1-229ENST00000561242 KLHL25Q9H0H3 589 aa10.34□□□□□ -0.75
TPM1-229ENST00000561242 FBXO8Q9NRD0 319 aa10.34□□□□□ -0.75
TPM1-229ENST00000561242 FGF21Q9NSA1 209 aa10.34□□□□□ -0.75
TPM1-229ENST00000561242 PCMTD2Q9NV79 361 aa10.34□□□□□ -0.75
TPM1-229ENST00000561242 NUDT4Q9NZJ9 180 aa10.34□□□□□ -0.75
TPM1-229ENST00000561242 CPSF2Q9P2I0 782 aaKnown RBP10.34□□□□□ -0.75
TPM1-229ENST00000561242 NDOR1Q9UHB4 597 aa10.34□□□□□ -0.75
TPM1-229ENST00000561242 TAC3Q9UHF0 121 aa10.34□□□□□ -0.75
TPM1-229ENST00000561242 GRID1Q9ULK0 1009 aa10.34□□□□□ -0.75
TPM1-229ENST00000561242 TRIOO75962 3097 aa10.33□□□□□ -0.76
TPM1-229ENST00000561242 MUC3AQ02505 3323 aa10.33□□□□□ -0.76
TPM1-229ENST00000561242 MED19A0JLT2 244 aaPredicted RBP10.33□□□□□ -0.76
TPM1-229ENST00000561242 CCDC151A5D8V7 595 aa10.33□□□□□ -0.76
TPM1-229ENST00000561242 TMEM150CB9EJG8 249 aa10.33□□□□□ -0.76
TPM1-229ENST00000561242 STMND1H3BQB6 276 aa10.33□□□□□ -0.76
TPM1-229ENST00000561242 CDC7O00311 574 aa10.33□□□□□ -0.76
TPM1-229ENST00000561242 NVLO15381 856 aaKnown RBP10.33□□□□□ -0.76
TPM1-229ENST00000561242 PRPF4O43172 522 aaKnown RBP eCLIP10.33□□□□□ -0.76
TPM1-229ENST00000561242 SRPX2O60687 465 aaPredicted RBP10.33□□□□□ -0.76
TPM1-229ENST00000561242 CRCPO75575 148 aa10.33□□□□□ -0.76
TPM1-229ENST00000561242 STK16O75716 305 aa10.33□□□□□ -0.76
TPM1-229ENST00000561242 OR2B3O76000 313 aa10.33□□□□□ -0.76
TPM1-229ENST00000561242 SERPIND1P05546 499 aa10.33□□□□□ -0.76
TPM1-229ENST00000561242 GSTA1P08263 222 aa10.33□□□□□ -0.76
TPM1-229ENST00000561242 CD1DP15813 335 aa10.33□□□□□ -0.76
TPM1-229ENST00000561242 ALAS2P22557 587 aa10.33□□□□□ -0.76
TPM1-229ENST00000561242 ECHS1P30084 290 aa10.33□□□□□ -0.76
TPM1-229ENST00000561242 CSF2RBP32927 897 aa10.33□□□□□ -0.76
TPM1-229ENST00000561242 GLRBP48167 497 aa10.33□□□□□ -0.76
TPM1-229ENST00000561242 PRDX1Q06830 199 aaKnown RBP10.33□□□□□ -0.76
TPM1-229ENST00000561242 LAPTM5Q13571 262 aa10.33□□□□□ -0.76
TPM1-229ENST00000561242 GRM7Q14831 915 aa10.33□□□□□ -0.76
TPM1-229ENST00000561242 RTP5Q14D33 572 aa10.33□□□□□ -0.76
TPM1-229ENST00000561242 RBBP5Q15291 538 aaKnown RBP10.33□□□□□ -0.76
TPM1-229ENST00000561242 ZNF658BQ4V348 819 aaPredicted RBP10.33□□□□□ -0.76
TPM1-229ENST00000561242 CFAP157Q5JU67 520 aa10.33□□□□□ -0.76
TPM1-229ENST00000561242 ICE2Q659A1 982 aa10.33□□□□□ -0.76
TPM1-229ENST00000561242 TTC19Q6DKK2 380 aaPredicted RBP10.33□□□□□ -0.76
TPM1-229ENST00000561242 TLDC1Q6P9B6 456 aa10.33□□□□□ -0.76
TPM1-229ENST00000561242 UNQ6494/PRO21346Q6UXR6 183 aa10.33□□□□□ -0.76
TPM1-229ENST00000561242 ARHGAP22Q7Z5H3 698 aa10.33□□□□□ -0.76
TPM1-229ENST00000561242 MYLK4Q86YV6 388 aaPredicted RBP10.33□□□□□ -0.76
TPM1-229ENST00000561242 HOMEZQ8IX15 550 aa10.33□□□□□ -0.76
TPM1-229ENST00000561242 SPATA6LQ8N4H0 392 aa10.33□□□□□ -0.76
TPM1-229ENST00000561242 LMNTD1Q8N9Z9 388 aa10.33□□□□□ -0.76
TPM1-229ENST00000561242 PPFIBP2Q8ND30 876 aa10.33□□□□□ -0.76
TPM1-229ENST00000561242 GIMAP7Q8NHV1 300 aa10.33□□□□□ -0.76
TPM1-229ENST00000561242 PPP1R14CQ8TAE6 165 aa10.33□□□□□ -0.76
TPM1-229ENST00000561242 RHEBL1Q8TAI7 183 aa10.33□□□□□ -0.76
TPM1-229ENST00000561242 HMGCLL1Q8TB92 370 aa10.33□□□□□ -0.76
TPM1-229ENST00000561242 ZNF480Q8WV37 535 aa10.33□□□□□ -0.76
TPM1-229ENST00000561242 KCTD4Q8WVF5 259 aa10.33□□□□□ -0.76
TPM1-229ENST00000561242 KCNE4Q8WWG9 221 aa10.33□□□□□ -0.76
TPM1-229ENST00000561242 NXNL1Q96CM4 212 aa10.33□□□□□ -0.76
TPM1-229ENST00000561242 CCDC126Q96EE4 140 aa10.33□□□□□ -0.76
TPM1-229ENST00000561242 VPS50Q96JG6 964 aa10.33□□□□□ -0.76
TPM1-229ENST00000561242 SLC46A1Q96NT5 459 aa10.33□□□□□ -0.76
TPM1-229ENST00000561242 DCBLD2Q96PD2 775 aa10.33□□□□□ -0.76
TPM1-229ENST00000561242 TRAPPC9Q96Q05 1148 aa10.33□□□□□ -0.76
TPM1-229ENST00000561242 OR2A14Q96R47 310 aa10.33□□□□□ -0.76
TPM1-229ENST00000561242 MRPL57Q9BQC6 102 aaKnown RBP10.33□□□□□ -0.76
TPM1-229ENST00000561242 SELENOSQ9BQE4 189 aa10.33□□□□□ -0.76
TPM1-229ENST00000561242 DPH7Q9BTV6 452 aa10.33□□□□□ -0.76
TPM1-229ENST00000561242 YIPF2Q9BWQ6 316 aa10.33□□□□□ -0.76
TPM1-229ENST00000561242 UNKQ9C0B0 810 aaKnown RBP10.33□□□□□ -0.76
TPM1-229ENST00000561242 TMEM184CQ9NVA4 438 aa10.33□□□□□ -0.76
TPM1-229ENST00000561242 DNAJC11Q9NVH1 559 aa10.33□□□□□ -0.76
TPM1-229ENST00000561242 OGFRQ9NZT2 677 aa10.33□□□□□ -0.76
TPM1-229ENST00000561242 TMEM9Q9P0T7 183 aa10.33□□□□□ -0.76
TPM1-229ENST00000561242 SENP1Q9P0U3 644 aa10.33□□□□□ -0.76
TPM1-229ENST00000561242 STOX2Q9P2F5 926 aaPredicted RBP10.33□□□□□ -0.76
TPM1-229ENST00000561242 PDP2Q9P2J9 529 aa10.33□□□□□ -0.76
TPM1-229ENST00000561242 OPTCQ9UBM4 332 aa10.33□□□□□ -0.76
TPM1-229ENST00000561242 CDC14AQ9UNH5 594 aa10.33□□□□□ -0.76
TPM1-229ENST00000561242 SRPK3Q9UPE1 567 aa10.33□□□□□ -0.76
TPM1-229ENST00000561242 PLAAQ9Y263 795 aa10.33□□□□□ -0.76
TPM1-229ENST00000561242 PCDHB3Q9Y5E6 796 aa10.33□□□□□ -0.76
TPM1-229ENST00000561242 TNRC6BQ9UPQ9 1833 aaKnown RBP10.33□□□□□ -0.76
TPM1-229ENST00000561242 EP300Q09472 2414 aaPredicted RBP10.32□□□□□ -0.76
TPM1-229ENST00000561242 IGHV5-51A0A0C4DH38 117 aa10.32□□□□□ -0.76
TPM1-229ENST00000561242 C9J4A7 227 aa10.32□□□□□ -0.76
TPM1-229ENST00000561242 E7ENX8 843 aa10.32□□□□□ -0.76
TPM1-229ENST00000561242 KIF1CO43896 1103 aaKnown RBP10.32□□□□□ -0.76
TPM1-229ENST00000561242 BRINP1O60477 761 aa10.32□□□□□ -0.76
TPM1-229ENST00000561242 KERAO60938 352 aa10.32□□□□□ -0.76
TPM1-229ENST00000561242 GLRA3O75311 464 aa10.32□□□□□ -0.76
TPM1-229ENST00000561242 SCRG1O75711 98 aa10.32□□□□□ -0.76
TPM1-229ENST00000561242 EBLN1P0CF75 366 aa10.32□□□□□ -0.76
TPM1-229ENST00000561242 HGFP14210 728 aa10.32□□□□□ -0.76
TPM1-229ENST00000561242 EPB42P16452 691 aa10.32□□□□□ -0.76
TPM1-229ENST00000561242 ITIH1P19827 911 aa10.32□□□□□ -0.76
TPM1-229ENST00000561242 MAGP20916 626 aa10.32□□□□□ -0.76
TPM1-229ENST00000561242 SLC5A2P31639 672 aa10.32□□□□□ -0.76
TPM1-229ENST00000561242 RPS15AP62244 130 aaKnown RBP10.32□□□□□ -0.76
TPM1-229ENST00000561242 RPS15P62841 145 aaKnown RBP10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms