RNA–Protein interactions for RNA: ENST00000560492.1

CDC42BPB-207, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 2

Gene CDC42BPB, Length 646 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-207ENST00000560492 ADGRG4Q8IZF6 3080 aa10.04□□□□□ -0.8
CDC42BPB-207ENST00000560492 PKDREJQ9NTG1 2253 aa10.04□□□□□ -0.8
CDC42BPB-207ENST00000560492 CPAMD8Q8IZJ3 1885 aa10.04□□□□□ -0.8
CDC42BPB-207ENST00000560492 TRBV5-4A0A0C4DH59 114 aa10.03□□□□□ -0.8
CDC42BPB-207ENST00000560492 OR51F1A6NGY5 319 aa10.03□□□□□ -0.8
CDC42BPB-207ENST00000560492 PCDH17O14917 1159 aa10.03□□□□□ -0.8
CDC42BPB-207ENST00000560492 RASAL1O95294 804 aa10.03□□□□□ -0.8
CDC42BPB-207ENST00000560492 CRYABP02511 175 aaKnown RBP10.03□□□□□ -0.8
CDC42BPB-207ENST00000560492 RBP3P10745 1247 aa10.03□□□□□ -0.8
CDC42BPB-207ENST00000560492 FBLP22087 321 aaKnown RBP10.03□□□□□ -0.8
CDC42BPB-207ENST00000560492 ACADLP28330 430 aa10.03□□□□□ -0.8
CDC42BPB-207ENST00000560492 PKLRP30613 574 aa10.03□□□□□ -0.8
CDC42BPB-207ENST00000560492 MARCKSL1P49006 195 aa10.03□□□□□ -0.8
CDC42BPB-207ENST00000560492 PLOD1Q02809 727 aaPredicted RBP10.03□□□□□ -0.8
CDC42BPB-207ENST00000560492 KLC1Q07866 573 aa10.03□□□□□ -0.8
CDC42BPB-207ENST00000560492 HSPA14Q0VDF9 509 aa10.03□□□□□ -0.8
CDC42BPB-207ENST00000560492 TAZQ16635 292 aa10.03□□□□□ -0.8
CDC42BPB-207ENST00000560492 ASTE1Q2TB18 679 aaPredicted RBP10.03□□□□□ -0.8
CDC42BPB-207ENST00000560492 ZNF658BQ4V348 819 aaPredicted RBP10.03□□□□□ -0.8
CDC42BPB-207ENST00000560492 YOD1Q5VVQ6 348 aaPredicted RBP10.03□□□□□ -0.8
CDC42BPB-207ENST00000560492 RPUSD3Q6P087 351 aaKnown RBP10.03□□□□□ -0.8
CDC42BPB-207ENST00000560492 TTC23LQ6PF05 361 aa10.03□□□□□ -0.8
CDC42BPB-207ENST00000560492 RPTNQ6XPR3 784 aa10.03□□□□□ -0.8
CDC42BPB-207ENST00000560492 BBS12Q6ZW61 710 aa10.03□□□□□ -0.8
CDC42BPB-207ENST00000560492 PIANPQ8IYJ0 282 aa10.03□□□□□ -0.8
CDC42BPB-207ENST00000560492 KATNAL2Q8IYT4 538 aa10.03□□□□□ -0.8
CDC42BPB-207ENST00000560492 DTWD1Q8N5C7 304 aa10.03□□□□□ -0.8
CDC42BPB-207ENST00000560492 TAB3Q8N5C8 712 aaPredicted RBP10.03□□□□□ -0.8
CDC42BPB-207ENST00000560492 ACTL9Q8TC94 416 aa10.03□□□□□ -0.8
CDC42BPB-207ENST00000560492 STT3BQ8TCJ2 826 aa10.03□□□□□ -0.8
CDC42BPB-207ENST00000560492 STYXQ8WUJ0 223 aa10.03□□□□□ -0.8
CDC42BPB-207ENST00000560492 SKA2Q8WVK7 121 aaPredicted RBP10.03□□□□□ -0.8
CDC42BPB-207ENST00000560492 CDKN2AIPNLQ96HQ2 116 aa10.03□□□□□ -0.8
CDC42BPB-207ENST00000560492 TTC1Q99614 292 aa10.03□□□□□ -0.8
CDC42BPB-207ENST00000560492 MESP1Q9BRJ9 268 aa10.03□□□□□ -0.8
CDC42BPB-207ENST00000560492 TSSK1BQ9BXA7 367 aa10.03□□□□□ -0.8
CDC42BPB-207ENST00000560492 SLC26A1Q9H2B4 701 aa10.03□□□□□ -0.8
CDC42BPB-207ENST00000560492 IL1RAPL1Q9NZN1 696 aa10.03□□□□□ -0.8
CDC42BPB-207ENST00000560492 ZNF282Q9UDV7 671 aaPredicted RBP10.03□□□□□ -0.8
CDC42BPB-207ENST00000560492 ZC3H7BQ9UGR2 993 aaKnown RBP10.03□□□□□ -0.8
CDC42BPB-207ENST00000560492 FEZ2Q9UHY8 353 aaPredicted RBP10.03□□□□□ -0.8
CDC42BPB-207ENST00000560492 MRPS2Q9Y399 296 aaKnown RBP10.03□□□□□ -0.8
CDC42BPB-207ENST00000560492 ALG6Q9Y672 507 aa10.03□□□□□ -0.8
CDC42BPB-207ENST00000560492 MED13LQ71F56 2210 aa10.03□□□□□ -0.8
CDC42BPB-207ENST00000560492 A0A0J9YVX5 310 aa10.02□□□□□ -0.81
CDC42BPB-207ENST00000560492 HYKKA2RU49 373 aa10.02□□□□□ -0.81
CDC42BPB-207ENST00000560492 FAM227AF5H4B4 570 aa10.02□□□□□ -0.81
CDC42BPB-207ENST00000560492 S1PR4O95977 384 aa10.02□□□□□ -0.81
CDC42BPB-207ENST00000560492 ZGLP1P0C6A0 271 aa10.02□□□□□ -0.81
CDC42BPB-207ENST00000560492 TPBGLP0DKB5 382 aa10.02□□□□□ -0.81
CDC42BPB-207ENST00000560492 MYBL2P10244 700 aa10.02□□□□□ -0.81
CDC42BPB-207ENST00000560492 CD9P21926 228 aa10.02□□□□□ -0.81
CDC42BPB-207ENST00000560492 CETN2P41208 172 aa10.02□□□□□ -0.81
CDC42BPB-207ENST00000560492 TNFSF10P50591 281 aa10.02□□□□□ -0.81
CDC42BPB-207ENST00000560492 TDGF1P3P51864 188 aa10.02□□□□□ -0.81
CDC42BPB-207ENST00000560492 ITIH4Q14624 930 aa10.02□□□□□ -0.81
CDC42BPB-207ENST00000560492 INAQ16352 499 aa10.02□□□□□ -0.81
CDC42BPB-207ENST00000560492 WASHC2DQ5SRD0 308 aa10.02□□□□□ -0.81
CDC42BPB-207ENST00000560492 ABHD17BQ5VST6 288 aa10.02□□□□□ -0.81
CDC42BPB-207ENST00000560492 DCUN1D3Q8IWE4 304 aa10.02□□□□□ -0.81
CDC42BPB-207ENST00000560492 RAB42Q8N4Z0 105 aa10.02□□□□□ -0.81
CDC42BPB-207ENST00000560492 MAGED4Q96JG8 741 aa10.02□□□□□ -0.81
CDC42BPB-207ENST00000560492 CABS1Q96KC9 395 aa10.02□□□□□ -0.81
CDC42BPB-207ENST00000560492 SPATA13Q96N96 652 aa10.02□□□□□ -0.81
CDC42BPB-207ENST00000560492 TAAR6Q96RI8 345 aa10.02□□□□□ -0.81
CDC42BPB-207ENST00000560492 DNAJC7Q99615 494 aa10.02□□□□□ -0.81
CDC42BPB-207ENST00000560492 TSPY26PQ9H489 355 aa10.02□□□□□ -0.81
CDC42BPB-207ENST00000560492 LUC7LQ9NQ29 371 aaKnown RBP10.02□□□□□ -0.81
CDC42BPB-207ENST00000560492 IGSF5Q9NSI5 407 aa10.02□□□□□ -0.81
CDC42BPB-207ENST00000560492 ABHD10Q9NUJ1 306 aa10.02□□□□□ -0.81
CDC42BPB-207ENST00000560492 STOX2Q9P2F5 926 aaPredicted RBP10.02□□□□□ -0.81
CDC42BPB-207ENST00000560492 PDZD2O15018 2839 aa10.02□□□□□ -0.81
CDC42BPB-207ENST00000560492 PCNX1Q96RV3 2341 aa10.01□□□□□ -0.81
CDC42BPB-207ENST00000560492 CSMD2Q7Z408 3487 aa10.01□□□□□ -0.81
CDC42BPB-207ENST00000560492 SLC5A10A0PJK1 596 aa10.01□□□□□ -0.81
CDC42BPB-207ENST00000560492 H7C0S8 307 aa10.01□□□□□ -0.81
CDC42BPB-207ENST00000560492 FFAR3O14843 346 aa10.01□□□□□ -0.81
CDC42BPB-207ENST00000560492 GPR42O15529 346 aa10.01□□□□□ -0.81
CDC42BPB-207ENST00000560492 CBFA2T2O43439 604 aa10.01□□□□□ -0.81
CDC42BPB-207ENST00000560492 GAS8O95995 478 aa10.01□□□□□ -0.81
CDC42BPB-207ENST00000560492 APOA4P06727 396 aa10.01□□□□□ -0.81
CDC42BPB-207ENST00000560492 HEXBP07686 556 aa10.01□□□□□ -0.81
CDC42BPB-207ENST00000560492 PRR35P0CG20 571 aa10.01□□□□□ -0.81
CDC42BPB-207ENST00000560492 FDXRP22570 491 aa10.01□□□□□ -0.81
CDC42BPB-207ENST00000560492 CA7P43166 264 aa10.01□□□□□ -0.81
CDC42BPB-207ENST00000560492 SMSP52788 366 aa10.01□□□□□ -0.81
CDC42BPB-207ENST00000560492 EMP2P54851 167 aa10.01□□□□□ -0.81
CDC42BPB-207ENST00000560492 ZNF33BQ06732 778 aa10.01□□□□□ -0.81
CDC42BPB-207ENST00000560492 TSTA3Q13630 321 aaPredicted RBP10.01□□□□□ -0.81
CDC42BPB-207ENST00000560492 TMED2Q15363 201 aa10.01□□□□□ -0.81
CDC42BPB-207ENST00000560492 LONRF1Q17RB8 773 aa10.01□□□□□ -0.81
CDC42BPB-207ENST00000560492 ZNF630Q2M218 657 aaPredicted RBP10.01□□□□□ -0.81
CDC42BPB-207ENST00000560492 CCDC38Q502W7 563 aa10.01□□□□□ -0.81
CDC42BPB-207ENST00000560492 DNAJC21Q5F1R6 531 aaKnown RBP10.01□□□□□ -0.81
CDC42BPB-207ENST00000560492 DENND5AQ6IQ26 1287 aa10.01□□□□□ -0.81
CDC42BPB-207ENST00000560492 XKRXQ6PP77 449 aa10.01□□□□□ -0.81
CDC42BPB-207ENST00000560492 NDUFAF7Q7L592 441 aa10.01□□□□□ -0.81
CDC42BPB-207ENST00000560492 CEP97Q8IW35 865 aa10.01□□□□□ -0.81
CDC42BPB-207ENST00000560492 DNAAF3Q8N9W5 541 aa10.01□□□□□ -0.81
CDC42BPB-207ENST00000560492 LINC01555Q8NAE3 123 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms