RNA–Protein interactions for RNA: ENST00000560447.1

RTF1-206, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-206ENST00000560447 TMEM159Q96B96 161 aa9.44□□□□□ -0.9
RTF1-206ENST00000560447 REPS1Q96D71 796 aa9.44□□□□□ -0.9
RTF1-206ENST00000560447 CXorf40BQ96DE9 158 aa9.44□□□□□ -0.9
RTF1-206ENST00000560447 PPP1R16AQ96I34 528 aa9.44□□□□□ -0.9
RTF1-206ENST00000560447 LINC00615Q96LM1 132 aaPredicted RBP9.44□□□□□ -0.9
RTF1-206ENST00000560447 PPM1MQ96MI6 270 aa9.44□□□□□ -0.9
RTF1-206ENST00000560447 TMEM74Q96NL1 305 aa9.44□□□□□ -0.9
RTF1-206ENST00000560447 OR52E6Q96RD3 313 aa9.44□□□□□ -0.9
RTF1-206ENST00000560447 ADI1Q9BV57 179 aa9.44□□□□□ -0.9
RTF1-206ENST00000560447 SMG9Q9H0W8 520 aaKnown RBP9.44□□□□□ -0.9
RTF1-206ENST00000560447 FAM120CQ9NX05 1096 aaKnown RBP9.44□□□□□ -0.9
RTF1-206ENST00000560447 SIRT5Q9NXA8 310 aa9.44□□□□□ -0.9
RTF1-206ENST00000560447 SMPD3Q9NY59 655 aaPredicted RBP9.44□□□□□ -0.9
RTF1-206ENST00000560447 PTTG2Q9NZH5 202 aa9.44□□□□□ -0.9
RTF1-206ENST00000560447 NEUROG3Q9Y4Z2 214 aa9.44□□□□□ -0.9
RTF1-206ENST00000560447 PCDHGA11Q9Y5H2 935 aa9.44□□□□□ -0.9
RTF1-206ENST00000560447 LRRK1Q38SD2 2015 aa9.43□□□□□ -0.9
RTF1-206ENST00000560447 DOCK6Q96HP0 2047 aa9.43□□□□□ -0.9
RTF1-206ENST00000560447 A0A087WXM4 84 aa9.43□□□□□ -0.9
RTF1-206ENST00000560447 EDDM13A0A1B0GTR0 161 aa9.43□□□□□ -0.9
RTF1-206ENST00000560447 C17orf113A0A1B0GUU1 675 aa9.43□□□□□ -0.9
RTF1-206ENST00000560447 A8MX80 341 aa9.43□□□□□ -0.9
RTF1-206ENST00000560447 GSTA4O15217 222 aa9.43□□□□□ -0.9
RTF1-206ENST00000560447 MYO1DO94832 1006 aa9.43□□□□□ -0.9
RTF1-206ENST00000560447 CYP17A1P05093 508 aa9.43□□□□□ -0.9
RTF1-206ENST00000560447 ELFN1P0C7U0 828 aa9.43□□□□□ -0.9
RTF1-206ENST00000560447 CKMT2P17540 419 aa9.43□□□□□ -0.9
RTF1-206ENST00000560447 AMD1P17707 334 aa9.43□□□□□ -0.9
RTF1-206ENST00000560447 OXTRP30559 389 aa9.43□□□□□ -0.9
RTF1-206ENST00000560447 CAPGP40121 348 aa9.43□□□□□ -0.9
RTF1-206ENST00000560447 GRIA2P42262 883 aa9.43□□□□□ -0.9
RTF1-206ENST00000560447 RPS9P46781 194 aaKnown RBP9.43□□□□□ -0.9
RTF1-206ENST00000560447 ALDH3B2P48448 385 aa9.43□□□□□ -0.9
RTF1-206ENST00000560447 RPS6KA3P51812 740 aa9.43□□□□□ -0.9
RTF1-206ENST00000560447 DGKQP52824 942 aa9.43□□□□□ -0.9
RTF1-206ENST00000560447 PFN3P60673 137 aa9.43□□□□□ -0.9
RTF1-206ENST00000560447 HMGCS1Q01581 520 aa9.43□□□□□ -0.9
RTF1-206ENST00000560447 IRF8Q02556 426 aa9.43□□□□□ -0.9
RTF1-206ENST00000560447 DPTQ07507 201 aa9.43□□□□□ -0.9
RTF1-206ENST00000560447 CHIT1Q13231 466 aa9.43□□□□□ -0.9
RTF1-206ENST00000560447 PTGR1Q14914 329 aa9.43□□□□□ -0.9
RTF1-206ENST00000560447 CPSF6Q16630 551 aaKnown RBP eCLIP9.43□□□□□ -0.9
RTF1-206ENST00000560447 SLC5A9Q2M3M2 681 aa9.43□□□□□ -0.9
RTF1-206ENST00000560447 EML3Q32P44 896 aa9.43□□□□□ -0.9
RTF1-206ENST00000560447 SPANXN4Q5MJ08 99 aa9.43□□□□□ -0.9
RTF1-206ENST00000560447 TMEM215Q68D42 235 aa9.43□□□□□ -0.9
RTF1-206ENST00000560447 SUSD1Q6UWL2 747 aa9.43□□□□□ -0.9
RTF1-206ENST00000560447 Q6ZVL8 140 aa9.43□□□□□ -0.9
RTF1-206ENST00000560447 CAMKMTQ7Z624 323 aa9.43□□□□□ -0.9
RTF1-206ENST00000560447 GPR149Q86SP6 731 aa9.43□□□□□ -0.9
RTF1-206ENST00000560447 GPR180Q86V85 440 aa9.43□□□□□ -0.9
RTF1-206ENST00000560447 ETFBKMTQ8IXQ9 262 aa9.43□□□□□ -0.9
RTF1-206ENST00000560447 DTWD1Q8N5C7 304 aa9.43□□□□□ -0.9
RTF1-206ENST00000560447 TERB1Q8NA31 727 aa9.43□□□□□ -0.9
RTF1-206ENST00000560447 TTC16Q8NEE8 873 aa9.43□□□□□ -0.9
RTF1-206ENST00000560447 TSPAN14Q8NG11 270 aa9.43□□□□□ -0.9
RTF1-206ENST00000560447 OR56A3Q8NH54 315 aa9.43□□□□□ -0.9
RTF1-206ENST00000560447 OR8D1Q8WZ84 308 aa9.43□□□□□ -0.9
RTF1-206ENST00000560447 NELL1Q92832 810 aa9.43□□□□□ -0.9
RTF1-206ENST00000560447 RAB7BQ96AH8 199 aa9.43□□□□□ -0.9
RTF1-206ENST00000560447 SDCCAG3Q96C92 435 aa9.43□□□□□ -0.9
RTF1-206ENST00000560447 WDR34Q96EX3 536 aa9.43□□□□□ -0.9
RTF1-206ENST00000560447 DTD2Q96FN9 168 aa9.43□□□□□ -0.9
RTF1-206ENST00000560447 REXO5Q96IC2 774 aaKnown RBP9.43□□□□□ -0.9
RTF1-206ENST00000560447 COQ10AQ96MF6 247 aa9.43□□□□□ -0.9
RTF1-206ENST00000560447 PRPF18Q99633 342 aaKnown RBP9.43□□□□□ -0.9
RTF1-206ENST00000560447 P2RY13Q9BPV8 354 aa9.43□□□□□ -0.9
RTF1-206ENST00000560447 CPPED1Q9BRF8 314 aaPredicted RBP9.43□□□□□ -0.9
RTF1-206ENST00000560447 RIOK2Q9BVS4 552 aaKnown RBP9.43□□□□□ -0.9
RTF1-206ENST00000560447 CHID1Q9BWS9 393 aa9.43□□□□□ -0.9
RTF1-206ENST00000560447 TRIM4Q9C037 500 aa9.43□□□□□ -0.9
RTF1-206ENST00000560447 PAIP1Q9H074 479 aaKnown RBP9.43□□□□□ -0.9
RTF1-206ENST00000560447 ABCG8Q9H221 673 aa9.43□□□□□ -0.9
RTF1-206ENST00000560447 LINC00597Q9H2U6 94 aa9.43□□□□□ -0.9
RTF1-206ENST00000560447 EHD1Q9H4M9 534 aa9.43□□□□□ -0.9
RTF1-206ENST00000560447 KAT8Q9H7Z6 458 aaKnown RBP9.43□□□□□ -0.9
RTF1-206ENST00000560447 SPATA6Q9NWH7 488 aaPredicted RBP9.43□□□□□ -0.9
RTF1-206ENST00000560447 USE1Q9NZ43 259 aa9.43□□□□□ -0.9
RTF1-206ENST00000560447 VAPAQ9P0L0 249 aa9.43□□□□□ -0.9
RTF1-206ENST00000560447 SLAMF8Q9P0V8 285 aa9.43□□□□□ -0.9
RTF1-206ENST00000560447 GMPR2Q9P2T1 348 aaKnown RBP9.43□□□□□ -0.9
RTF1-206ENST00000560447 DNAJB9Q9UBS3 223 aa9.43□□□□□ -0.9
RTF1-206ENST00000560447 NIPSNAP3AQ9UFN0 247 aaPredicted RBP9.43□□□□□ -0.9
RTF1-206ENST00000560447 PPT2Q9UMR5 302 aa9.43□□□□□ -0.9
RTF1-206ENST00000560447 CORO2BQ9UQ03 480 aa9.43□□□□□ -0.9
RTF1-206ENST00000560447 MRPS23Q9Y3D9 190 aaKnown RBP9.43□□□□□ -0.9
RTF1-206ENST00000560447 TSC22D4Q9Y3Q8 395 aa9.43□□□□□ -0.9
RTF1-206ENST00000560447 CROCCQ5TZA2 2017 aa9.43□□□□□ -0.9
RTF1-206ENST00000560447 ALPK3Q96L96 1907 aa9.43□□□□□ -0.9
RTF1-206ENST00000560447 CEP350Q5VT06 3117 aa9.42□□□□□ -0.9
RTF1-206ENST00000560447 LINC01553A4QN01 128 aa9.42□□□□□ -0.9
RTF1-206ENST00000560447 KLHL33A6NCF5 533 aa9.42□□□□□ -0.9
RTF1-206ENST00000560447 SAC3D1A6NKF1 404 aa9.42□□□□□ -0.9
RTF1-206ENST00000560447 ENO4A6NNW6 628 aa9.42□□□□□ -0.9
RTF1-206ENST00000560447 ARHGEF33A8MVX0 844 aa9.42□□□□□ -0.9
RTF1-206ENST00000560447 FADS2P1A8MWK0 482 aa9.42□□□□□ -0.9
RTF1-206ENST00000560447 TTC34A8MYJ7 566 aa9.42□□□□□ -0.9
RTF1-206ENST00000560447 EVPLLA8MZ36 301 aa9.42□□□□□ -0.9
RTF1-206ENST00000560447 ZNF701M0R085 212 aaPredicted RBP9.42□□□□□ -0.9
RTF1-206ENST00000560447 DLGAP1O14490 977 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms