RNA–Protein interactions for RNA: ENST00000560307.5

SNRPA1-209, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 433 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-209ENST00000560307 SCAF8Q9UPN6 1271 aaKnown RBP5.83□□□□□ -1.48
SNRPA1-209ENST00000560307 TNFSF13BQ9Y275 285 aa5.83□□□□□ -1.48
SNRPA1-209ENST00000560307 BTRCQ9Y297 605 aa5.83□□□□□ -1.48
SNRPA1-209ENST00000560307 AAR2Q9Y312 384 aaKnown RBP5.83□□□□□ -1.48
SNRPA1-209ENST00000560307 PCDHGA3Q9Y5H0 932 aa5.83□□□□□ -1.48
SNRPA1-209ENST00000560307 TIMM13Q9Y5L4 95 aaPredicted RBP5.83□□□□□ -1.48
SNRPA1-209ENST00000560307 GPR45Q9Y5Y3 372 aa5.83□□□□□ -1.48
SNRPA1-209ENST00000560307 SCN9AQ15858 1988 aa5.83□□□□□ -1.48
SNRPA1-209ENST00000560307 PHIPQ8WWQ0 1821 aa5.83□□□□□ -1.48
SNRPA1-209ENST00000560307 LCTP09848 1927 aa5.82□□□□□ -1.48
SNRPA1-209ENST00000560307 MYLKQ15746 1914 aa5.82□□□□□ -1.48
SNRPA1-209ENST00000560307 A0A075B6Q4 140 aa5.82□□□□□ -1.48
SNRPA1-209ENST00000560307 OR5K3A6NET4 321 aa5.82□□□□□ -1.48
SNRPA1-209ENST00000560307 H3BS24 57 aa5.82□□□□□ -1.48
SNRPA1-209ENST00000560307 TOR1BO14657 336 aa5.82□□□□□ -1.48
SNRPA1-209ENST00000560307 ARHGEF9O43307 516 aa5.82□□□□□ -1.48
SNRPA1-209ENST00000560307 B4GAT1O43505 415 aa5.82□□□□□ -1.48
SNRPA1-209ENST00000560307 ANXA9O76027 345 aa5.82□□□□□ -1.48
SNRPA1-209ENST00000560307 MFN2O95140 757 aa5.82□□□□□ -1.48
SNRPA1-209ENST00000560307 SCELO95171 688 aa5.82□□□□□ -1.48
SNRPA1-209ENST00000560307 ZNF205O95201 554 aa5.82□□□□□ -1.48
SNRPA1-209ENST00000560307 ZBTB7AO95365 584 aa5.82□□□□□ -1.48
SNRPA1-209ENST00000560307 FYNP06241 537 aa5.82□□□□□ -1.48
SNRPA1-209ENST00000560307 RETP07949 1114 aa5.82□□□□□ -1.48
SNRPA1-209ENST00000560307 SERPINF2P08697 491 aa5.82□□□□□ -1.48
SNRPA1-209ENST00000560307 MSL3P1P0C860 447 aa5.82□□□□□ -1.48
SNRPA1-209ENST00000560307 MTHFD1P11586 935 aaKnown RBP5.82□□□□□ -1.48
SNRPA1-209ENST00000560307 IL7P13232 177 aa5.82□□□□□ -1.48
SNRPA1-209ENST00000560307 HNRNPLP14866 589 aaKnown RBP eCLIP5.82□□□□□ -1.48
SNRPA1-209ENST00000560307 CTRB1P17538 263 aa5.82□□□□□ -1.48
SNRPA1-209ENST00000560307 MSH3P20585 1137 aa5.82□□□□□ -1.48
SNRPA1-209ENST00000560307 CYP2A7P20853 494 aa5.82□□□□□ -1.48
SNRPA1-209ENST00000560307 YWHAQP27348 245 aa5.82□□□□□ -1.48
SNRPA1-209ENST00000560307 NMBRP28336 390 aa5.82□□□□□ -1.48
SNRPA1-209ENST00000560307 ERP29P30040 261 aaKnown RBP5.82□□□□□ -1.48
SNRPA1-209ENST00000560307 MATKP42679 507 aa5.82□□□□□ -1.48
SNRPA1-209ENST00000560307 MTHFRP42898 656 aa5.82□□□□□ -1.48
SNRPA1-209ENST00000560307 RECQLP46063 649 aaPredicted RBP5.82□□□□□ -1.48
SNRPA1-209ENST00000560307 GLRBP48167 497 aa5.82□□□□□ -1.48
SNRPA1-209ENST00000560307 PPP3CCP48454 512 aa5.82□□□□□ -1.48
SNRPA1-209ENST00000560307 CLK3P49761 638 aaKnown RBP5.82□□□□□ -1.48
SNRPA1-209ENST00000560307 BCAT1P54687 386 aa5.82□□□□□ -1.48
SNRPA1-209ENST00000560307 GEMP55040 296 aa5.82□□□□□ -1.48
SNRPA1-209ENST00000560307 CDH8P55286 799 aa5.82□□□□□ -1.48
SNRPA1-209ENST00000560307 TAS2R39P59534 338 aa5.82□□□□□ -1.48
SNRPA1-209ENST00000560307 VBP1P61758 197 aa5.82□□□□□ -1.48
SNRPA1-209ENST00000560307 RPL11P62913 178 aaKnown RBP5.82□□□□□ -1.48
SNRPA1-209ENST00000560307 HERVK_113P63132 956 aa5.82□□□□□ -1.48
SNRPA1-209ENST00000560307 RBP5P82980 135 aa5.82□□□□□ -1.48
SNRPA1-209ENST00000560307 POU5F1BQ06416 359 aa5.82□□□□□ -1.48
SNRPA1-209ENST00000560307 SLC13A2Q13183 592 aa5.82□□□□□ -1.48
SNRPA1-209ENST00000560307 SEMA3BQ13214 749 aa5.82□□□□□ -1.48
SNRPA1-209ENST00000560307 RPS6KA2Q15349 733 aa5.82□□□□□ -1.48
SNRPA1-209ENST00000560307 TBCEQ15813 527 aaPredicted RBP5.82□□□□□ -1.48
SNRPA1-209ENST00000560307 FAM187BQ17R55 369 aa5.82□□□□□ -1.48
SNRPA1-209ENST00000560307 SMU1Q2TAY7 513 aa5.82□□□□□ -1.48
SNRPA1-209ENST00000560307 KRTAP19-4Q3LI73 84 aa5.82□□□□□ -1.48
SNRPA1-209ENST00000560307 SLC25A52Q3SY17 297 aa5.82□□□□□ -1.48
SNRPA1-209ENST00000560307 ZIK1Q3SY52 487 aaPredicted RBP5.82□□□□□ -1.48
SNRPA1-209ENST00000560307 MINDY4Q4G0A6 757 aa5.82□□□□□ -1.48
SNRPA1-209ENST00000560307 CDONQ4KMG0 1287 aa5.82□□□□□ -1.48
SNRPA1-209ENST00000560307 UNC50Q53HI1 259 aa5.82□□□□□ -1.48
SNRPA1-209ENST00000560307 PITRM1Q5JRX3 1037 aa5.82□□□□□ -1.48
SNRPA1-209ENST00000560307 RTP2Q5QGT7 225 aa5.82□□□□□ -1.48
SNRPA1-209ENST00000560307 TPRG1LQ5T0D9 272 aa5.82□□□□□ -1.48
SNRPA1-209ENST00000560307 CERCAMQ5T4B2 595 aa5.82□□□□□ -1.48
SNRPA1-209ENST00000560307 ATF7IP2Q5U623 682 aa5.82□□□□□ -1.48
SNRPA1-209ENST00000560307 MLIPQ5VWP3 458 aa5.82□□□□□ -1.48
SNRPA1-209ENST00000560307 TMEM236Q5W0B7 351 aa5.82□□□□□ -1.48
SNRPA1-209ENST00000560307 BSPRYQ5W0U4 402 aa5.82□□□□□ -1.48
SNRPA1-209ENST00000560307 CTRB2Q6GPI1 263 aa5.82□□□□□ -1.48
SNRPA1-209ENST00000560307 GDPD3Q7L5L3 318 aa5.82□□□□□ -1.48
SNRPA1-209ENST00000560307 NOXA1Q86UR1 476 aa5.82□□□□□ -1.48
SNRPA1-209ENST00000560307 ZFAND4Q86XD8 727 aa5.82□□□□□ -1.48
SNRPA1-209ENST00000560307 RAB43Q86YS6 212 aa5.82□□□□□ -1.48
SNRPA1-209ENST00000560307 CEP97Q8IW35 865 aa5.82□□□□□ -1.48
SNRPA1-209ENST00000560307 TCTE3Q8IZS6 198 aa5.82□□□□□ -1.48
SNRPA1-209ENST00000560307 Q8N9G6 341 aaPredicted RBP5.82□□□□□ -1.48
SNRPA1-209ENST00000560307 C1orf162Q8NEQ5 155 aaPredicted RBP5.82□□□□□ -1.48
SNRPA1-209ENST00000560307 DNERQ8NFT8 737 aa5.82□□□□□ -1.48
SNRPA1-209ENST00000560307 RHEBL1Q8TAI7 183 aa5.82□□□□□ -1.48
SNRPA1-209ENST00000560307 FIG4Q92562 907 aa5.82□□□□□ -1.48
SNRPA1-209ENST00000560307 DPF3Q92784 378 aa5.82□□□□□ -1.48
SNRPA1-209ENST00000560307 NT5C3BQ969T7 300 aa5.82□□□□□ -1.48
SNRPA1-209ENST00000560307 NCLNQ969V3 563 aa5.82□□□□□ -1.48
SNRPA1-209ENST00000560307 TIFAQ96CG3 184 aa5.82□□□□□ -1.48
SNRPA1-209ENST00000560307 SLC39A13Q96H72 371 aa5.82□□□□□ -1.48
SNRPA1-209ENST00000560307 ST6GAL2Q96JF0 529 aa5.82□□□□□ -1.48
SNRPA1-209ENST00000560307 TEKT5Q96M29 485 aa5.82□□□□□ -1.48
SNRPA1-209ENST00000560307 RNF145Q96MT1 663 aa5.82□□□□□ -1.48
SNRPA1-209ENST00000560307 PTCHD1Q96NR3 888 aa5.82□□□□□ -1.48
SNRPA1-209ENST00000560307 FCRL5Q96RD9 977 aa5.82□□□□□ -1.48
SNRPA1-209ENST00000560307 PITX2Q99697 317 aa5.82□□□□□ -1.48
SNRPA1-209ENST00000560307 AIFM2Q9BRQ8 373 aa5.82□□□□□ -1.48
SNRPA1-209ENST00000560307 TMEM246Q9BRR3 403 aa5.82□□□□□ -1.48
SNRPA1-209ENST00000560307 MLPHQ9BV36 600 aaPredicted RBP5.82□□□□□ -1.48
SNRPA1-209ENST00000560307 JAM3Q9BX67 310 aa5.82□□□□□ -1.48
SNRPA1-209ENST00000560307 ERVK-6Q9BXR3 956 aa5.82□□□□□ -1.48
SNRPA1-209ENST00000560307 FZD8Q9H461 694 aa5.82□□□□□ -1.48
SNRPA1-209ENST00000560307 C3orf14Q9HBI5 128 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms