RNA–Protein interactions for RNA: ENST00000559891.1

TM2D3-208, Transcript of TM2 domain containing 3, humanhuman

TSL 1 (best)

Gene TM2D3, Length 2,133 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM2D3-208ENST00000559891 CCR10P46092 362 aa11.25□□□□□ -0.61
TM2D3-208ENST00000559891 BLKP51451 505 aa11.25□□□□□ -0.61
TM2D3-208ENST00000559891 HNRNPKP61978 463 aaKnown RBP eCLIP11.25□□□□□ -0.61
TM2D3-208ENST00000559891 TGFBIQ15582 683 aa11.25□□□□□ -0.61
TM2D3-208ENST00000559891 IYDQ6PHW0 289 aa11.25□□□□□ -0.61
TM2D3-208ENST00000559891 ABRAXAS1Q6UWZ7 409 aa11.25□□□□□ -0.61
TM2D3-208ENST00000559891 MAVSQ7Z434 540 aa11.25□□□□□ -0.61
TM2D3-208ENST00000559891 PPP4R1Q8TF05 950 aa11.25□□□□□ -0.61
TM2D3-208ENST00000559891 FERD3LQ96RJ6 166 aa11.25□□□□□ -0.61
TM2D3-208ENST00000559891 GSDMCQ9BYG8 508 aa11.25□□□□□ -0.61
TM2D3-208ENST00000559891 TFB2MQ9H5Q4 396 aaKnown RBP11.25□□□□□ -0.61
TM2D3-208ENST00000559891 XKR8Q9H6D3 395 aa11.25□□□□□ -0.61
TM2D3-208ENST00000559891 PARD6AQ9NPB6 346 aa11.25□□□□□ -0.61
TM2D3-208ENST00000559891 KLHL42Q9P2K6 505 aa11.25□□□□□ -0.61
TM2D3-208ENST00000559891 RAB23Q9ULC3 237 aa11.25□□□□□ -0.61
TM2D3-208ENST00000559891 ACSL5Q9ULC5 683 aa11.25□□□□□ -0.61
TM2D3-208ENST00000559891 RNF112Q9ULX5 631 aa11.25□□□□□ -0.61
TM2D3-208ENST00000559891 ZNF195O14628 629 aa11.24□□□□□ -0.61
TM2D3-208ENST00000559891 GSTM1P09488 218 aa11.24□□□□□ -0.61
TM2D3-208ENST00000559891 ZCCHC18P0CG32 403 aa11.24□□□□□ -0.61
TM2D3-208ENST00000559891 MPC1LP0DKB6 136 aa11.24□□□□□ -0.61
TM2D3-208ENST00000559891 COL6A2P12110 1019 aa11.24□□□□□ -0.61
TM2D3-208ENST00000559891 ENO3P13929 434 aaPredicted RBP11.24□□□□□ -0.61
TM2D3-208ENST00000559891 EPHA8P29322 1005 aaPredicted RBP11.24□□□□□ -0.61
TM2D3-208ENST00000559891 SLC26A3P40879 764 aa11.24□□□□□ -0.61
TM2D3-208ENST00000559891 GDF5P43026 501 aa11.24□□□□□ -0.61
TM2D3-208ENST00000559891 RPIAP49247 311 aa11.24□□□□□ -0.61
TM2D3-208ENST00000559891 IDH3AP50213 366 aa11.24□□□□□ -0.61
TM2D3-208ENST00000559891 POLE2P56282 527 aa11.24□□□□□ -0.61
TM2D3-208ENST00000559891 YBX1P67809 324 aaKnown RBP11.24□□□□□ -0.61
TM2D3-208ENST00000559891 GSTM4Q03013 218 aa11.24□□□□□ -0.61
TM2D3-208ENST00000559891 CCNIQ14094 377 aa11.24□□□□□ -0.61
TM2D3-208ENST00000559891 ZNF423Q2M1K9 1284 aa11.24□□□□□ -0.61
TM2D3-208ENST00000559891 KANSL1Q7Z3B3 1105 aa11.24□□□□□ -0.61
TM2D3-208ENST00000559891 C10orf107Q8IVU9 208 aa11.24□□□□□ -0.61
TM2D3-208ENST00000559891 MINDY1Q8N5J2 469 aa11.24□□□□□ -0.61
TM2D3-208ENST00000559891 SLC37A2Q8TED4 501 aa11.24□□□□□ -0.61
TM2D3-208ENST00000559891 SAP25Q8TEE9 199 aa11.24□□□□□ -0.61
TM2D3-208ENST00000559891 ZDHHC1Q8WTX9 485 aa11.24□□□□□ -0.61
TM2D3-208ENST00000559891 NCSTNQ92542 709 aa11.24□□□□□ -0.61
TM2D3-208ENST00000559891 CMTM5Q96DZ9 223 aa11.24□□□□□ -0.61
TM2D3-208ENST00000559891 SORT1Q99523 831 aa11.24□□□□□ -0.61
TM2D3-208ENST00000559891 PKP4Q99569 1192 aa11.24□□□□□ -0.61
TM2D3-208ENST00000559891 ATG10Q9H0Y0 220 aa11.24□□□□□ -0.61
TM2D3-208ENST00000559891 ERVMER34-1Q9H9K5 563 aa11.24□□□□□ -0.61
TM2D3-208ENST00000559891 SPASTQ9UBP0 616 aa11.24□□□□□ -0.61
TM2D3-208ENST00000559891 ASCC3Q8N3C0 2202 aaKnown RBP11.24□□□□□ -0.61
TM2D3-208ENST00000559891 RIF1Q5UIP0 2472 aaKnown RBP11.24□□□□□ -0.61
TM2D3-208ENST00000559891 SUPT3HB4E1H0 165 aa11.24□□□□□ -0.61
TM2D3-208ENST00000559891 TRIM38O00635 465 aa11.24□□□□□ -0.61
TM2D3-208ENST00000559891 TAPBPO15533 448 aa11.24□□□□□ -0.61
TM2D3-208ENST00000559891 NOBOXO60393 691 aa11.24□□□□□ -0.61
TM2D3-208ENST00000559891 SUPT3HO75486 399 aa11.24□□□□□ -0.61
TM2D3-208ENST00000559891 PRDX6P30041 224 aa11.24□□□□□ -0.61
TM2D3-208ENST00000559891 RXRGP48443 463 aa11.24□□□□□ -0.61
TM2D3-208ENST00000559891 ERFP50548 548 aa11.24□□□□□ -0.61
TM2D3-208ENST00000559891 ATP6V0D1P61421 351 aa11.24□□□□□ -0.61
TM2D3-208ENST00000559891 ASPHQ12797 758 aa11.24□□□□□ -0.61
TM2D3-208ENST00000559891 RPA4Q13156 261 aa11.24□□□□□ -0.61
TM2D3-208ENST00000559891 FASTKQ14296 549 aaKnown RBP11.24□□□□□ -0.61
TM2D3-208ENST00000559891 ELOCQ15369 112 aa11.24□□□□□ -0.61
TM2D3-208ENST00000559891 PFKFB4Q16877 469 aa11.24□□□□□ -0.61
TM2D3-208ENST00000559891 LAIR1Q6GTX8 287 aa11.24□□□□□ -0.61
TM2D3-208ENST00000559891 RNF111Q6ZNA4 994 aa11.24□□□□□ -0.61
TM2D3-208ENST00000559891 GPSM1Q86YR5 675 aa11.24□□□□□ -0.61
TM2D3-208ENST00000559891 CEP76Q8TAP6 659 aa11.24□□□□□ -0.61
TM2D3-208ENST00000559891 STAG3L4Q8TBR4 150 aa11.24□□□□□ -0.61
TM2D3-208ENST00000559891 PYDC1Q8WXC3 89 aa11.24□□□□□ -0.61
TM2D3-208ENST00000559891 PYCR2Q96C36 320 aa11.24□□□□□ -0.61
TM2D3-208ENST00000559891 MRPL57Q9BQC6 102 aaKnown RBP11.24□□□□□ -0.61
TM2D3-208ENST00000559891 SLC12A9Q9BXP2 914 aa11.24□□□□□ -0.61
TM2D3-208ENST00000559891 MRPL46Q9H2W6 279 aaKnown RBP11.24□□□□□ -0.61
TM2D3-208ENST00000559891 PCOLCE2Q9UKZ9 415 aa11.24□□□□□ -0.61
TM2D3-208ENST00000559891 DOLKQ9UPQ8 538 aa11.24□□□□□ -0.61
TM2D3-208ENST00000559891 BTBD3Q9Y2F9 522 aa11.24□□□□□ -0.61
TM2D3-208ENST00000559891 CFAP54Q96N23 3096 aa11.23□□□□□ -0.61
TM2D3-208ENST00000559891 A8MT66 165 aa11.23□□□□□ -0.61
TM2D3-208ENST00000559891 IFRD1O00458 451 aaPredicted RBP11.23□□□□□ -0.61
TM2D3-208ENST00000559891 PPP6CO00743 305 aa11.23□□□□□ -0.61
TM2D3-208ENST00000559891 KHNYNO15037 678 aaKnown RBP11.23□□□□□ -0.61
TM2D3-208ENST00000559891 PPM1DO15297 605 aa11.23□□□□□ -0.61
TM2D3-208ENST00000559891 GDF9O60383 454 aa11.23□□□□□ -0.61
TM2D3-208ENST00000559891 KERAO60938 352 aa11.23□□□□□ -0.61
TM2D3-208ENST00000559891 SLC16A8O95907 504 aa11.23□□□□□ -0.61
TM2D3-208ENST00000559891 MTHFD1P11586 935 aaKnown RBP11.23□□□□□ -0.61
TM2D3-208ENST00000559891 TSPAN8P19075 237 aa11.23□□□□□ -0.61
TM2D3-208ENST00000559891 ARRB2P32121 409 aa11.23□□□□□ -0.61
TM2D3-208ENST00000559891 HOXD12P35452 270 aa11.23□□□□□ -0.61
TM2D3-208ENST00000559891 ARRB1P49407 418 aaPredicted RBP11.23□□□□□ -0.61
TM2D3-208ENST00000559891 ABCE1P61221 599 aaKnown RBP11.23□□□□□ -0.61
TM2D3-208ENST00000559891 LIN52Q52LA3 116 aa11.23□□□□□ -0.61
TM2D3-208ENST00000559891 NEK10Q6ZWH5 1172 aa11.23□□□□□ -0.61
TM2D3-208ENST00000559891 ST13P4Q8IZP2 240 aaPredicted RBP11.23□□□□□ -0.61
TM2D3-208ENST00000559891 SFRP1Q8N474 314 aa11.23□□□□□ -0.61
TM2D3-208ENST00000559891 POU5F2Q8N7G0 328 aa11.23□□□□□ -0.61
TM2D3-208ENST00000559891 LOXL4Q96JB6 756 aa11.23□□□□□ -0.61
TM2D3-208ENST00000559891 CENPKQ9BS16 269 aa11.23□□□□□ -0.61
TM2D3-208ENST00000559891 MENTQ9BUN1 341 aa11.23□□□□□ -0.61
TM2D3-208ENST00000559891 NUSAP1Q9BXS6 441 aaKnown RBP11.23□□□□□ -0.61
TM2D3-208ENST00000559891 KLHL4Q9C0H6 718 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms