RNA–Protein interactions for RNA: ENST00000559694.5

CARMIL3-202, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 5

Gene CARMIL3, Length 4,319 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-202ENST00000559694 APOBEC3BQ9UH17 382 aaKnown RBP10.39□□□□□ -0.75
CARMIL3-202ENST00000559694 TAC3Q9UHF0 121 aa10.39□□□□□ -0.75
CARMIL3-202ENST00000559694 A0A0J9YVX5 310 aa10.39□□□□□ -0.75
CARMIL3-202ENST00000559694 EPN2O95208 641 aa10.39□□□□□ -0.75
CARMIL3-202ENST00000559694 TOP3BO95985 862 aaKnown RBP10.39□□□□□ -0.75
CARMIL3-202ENST00000559694 GM2AP17900 193 aa10.39□□□□□ -0.75
CARMIL3-202ENST00000559694 ITGB7P26010 798 aa10.39□□□□□ -0.75
CARMIL3-202ENST00000559694 MAOBP27338 520 aa10.39□□□□□ -0.75
CARMIL3-202ENST00000559694 SOX6P35712 828 aa10.39□□□□□ -0.75
CARMIL3-202ENST00000559694 ARCN1P48444 511 aaKnown RBP10.39□□□□□ -0.75
CARMIL3-202ENST00000559694 MLF2Q15773 248 aaPredicted RBP10.39□□□□□ -0.75
CARMIL3-202ENST00000559694 KDELC1Q6UW63 502 aa10.39□□□□□ -0.75
CARMIL3-202ENST00000559694 SUSD1Q6UWL2 747 aa10.39□□□□□ -0.75
CARMIL3-202ENST00000559694 CD300LGQ6UXG3 332 aa10.39□□□□□ -0.75
CARMIL3-202ENST00000559694 ATG16L2Q8NAA4 619 aa10.39□□□□□ -0.75
CARMIL3-202ENST00000559694 OR2A12Q8NGT7 310 aa10.39□□□□□ -0.75
CARMIL3-202ENST00000559694 ZFP28Q8NHY6 868 aa10.39□□□□□ -0.75
CARMIL3-202ENST00000559694 ARRDC2Q8TBH0 407 aa10.39□□□□□ -0.75
CARMIL3-202ENST00000559694 SPPL2AQ8TCT8 520 aa10.39□□□□□ -0.75
CARMIL3-202ENST00000559694 C19orf60Q96EN9 201 aa10.39□□□□□ -0.75
CARMIL3-202ENST00000559694 DEPDC7Q96QD5 511 aa10.39□□□□□ -0.75
CARMIL3-202ENST00000559694 UBAP1Q9NZ09 502 aa10.39□□□□□ -0.75
CARMIL3-202ENST00000559694 CLEC4EQ9ULY5 219 aa10.39□□□□□ -0.75
CARMIL3-202ENST00000559694 DHRS7Q9Y394 339 aa10.39□□□□□ -0.75
CARMIL3-202ENST00000559694 RBBP6Q7Z6E9 1792 aaKnown RBP10.38□□□□□ -0.75
CARMIL3-202ENST00000559694 KIF13BQ9NQT8 1826 aa10.38□□□□□ -0.75
CARMIL3-202ENST00000559694 APBB3O95704 486 aa10.38□□□□□ -0.75
CARMIL3-202ENST00000559694 S1PR4O95977 384 aa10.38□□□□□ -0.75
CARMIL3-202ENST00000559694 NR4A1P22736 598 aa10.38□□□□□ -0.75
CARMIL3-202ENST00000559694 CRATP43155 626 aa10.38□□□□□ -0.75
CARMIL3-202ENST00000559694 CDH15P55291 814 aa10.38□□□□□ -0.75
CARMIL3-202ENST00000559694 CLDN2P57739 230 aa10.38□□□□□ -0.75
CARMIL3-202ENST00000559694 TRAF3Q13114 568 aa10.38□□□□□ -0.75
CARMIL3-202ENST00000559694 SMAD4Q13485 552 aaKnown RBP10.38□□□□□ -0.75
CARMIL3-202ENST00000559694 ELOCQ15369 112 aa10.38□□□□□ -0.75
CARMIL3-202ENST00000559694 ZNF77Q15935 545 aa10.38□□□□□ -0.75
CARMIL3-202ENST00000559694 TIGD2Q4W5G0 525 aa10.38□□□□□ -0.75
CARMIL3-202ENST00000559694 PRAMEF13Q5VWM6 474 aa10.38□□□□□ -0.75
CARMIL3-202ENST00000559694 AGTRAPQ6RW13 159 aa10.38□□□□□ -0.75
CARMIL3-202ENST00000559694 FRMD7Q6ZUT3 714 aa10.38□□□□□ -0.75
CARMIL3-202ENST00000559694 C11orf74Q86VG3 221 aa10.38□□□□□ -0.75
CARMIL3-202ENST00000559694 PARP8Q8N3A8 854 aa10.38□□□□□ -0.75
CARMIL3-202ENST00000559694 DENND1AQ8TEH3 1009 aa10.38□□□□□ -0.75
CARMIL3-202ENST00000559694 USP7Q93009 1102 aa10.38□□□□□ -0.75
CARMIL3-202ENST00000559694 PPCDCQ96CD2 204 aa10.38□□□□□ -0.75
CARMIL3-202ENST00000559694 PANX1Q96RD7 426 aa10.38□□□□□ -0.75
CARMIL3-202ENST00000559694 VN1R3Q9BXE9 311 aa10.38□□□□□ -0.75
CARMIL3-202ENST00000559694 KLHL28Q9NXS3 571 aa10.38□□□□□ -0.75
CARMIL3-202ENST00000559694 OBP2AQ9NY56 170 aa10.38□□□□□ -0.75
CARMIL3-202ENST00000559694 PLAGL1Q9UM63 463 aa10.38□□□□□ -0.75
CARMIL3-202ENST00000559694 OR10H1Q9Y4A9 318 aa10.38□□□□□ -0.75
CARMIL3-202ENST00000559694 ZDBF2Q9HCK1 2354 aa10.38□□□□□ -0.75
CARMIL3-202ENST00000559694 E7ESA3 106 aa10.38□□□□□ -0.75
CARMIL3-202ENST00000559694 ITM2AO43736 263 aa10.38□□□□□ -0.75
CARMIL3-202ENST00000559694 AP2A2O94973 939 aa10.38□□□□□ -0.75
CARMIL3-202ENST00000559694 NUDT14O95848 222 aa10.38□□□□□ -0.75
CARMIL3-202ENST00000559694 IFNA14P01570 189 aa10.38□□□□□ -0.75
CARMIL3-202ENST00000559694 ANXA4P09525 319 aaPredicted RBP10.38□□□□□ -0.75
CARMIL3-202ENST00000559694 XRCC1P18887 633 aaPredicted RBP10.38□□□□□ -0.75
CARMIL3-202ENST00000559694 ITGAXP20702 1163 aa10.38□□□□□ -0.75
CARMIL3-202ENST00000559694 HNRNPA2B1P22626 353 aaKnown RBP10.38□□□□□ -0.75
CARMIL3-202ENST00000559694 C2orf80Q0P641 193 aa10.38□□□□□ -0.75
CARMIL3-202ENST00000559694 STX4Q12846 297 aa10.38□□□□□ -0.75
CARMIL3-202ENST00000559694 SEMA3AQ14563 771 aa10.38□□□□□ -0.75
CARMIL3-202ENST00000559694 SUZ12Q15022 739 aaKnown RBP10.38□□□□□ -0.75
CARMIL3-202ENST00000559694 CARTPTQ16568 116 aa10.38□□□□□ -0.75
CARMIL3-202ENST00000559694 INAVAQ3KP66 663 aa10.38□□□□□ -0.75
CARMIL3-202ENST00000559694 LSM12Q3MHD2 195 aaKnown RBP10.38□□□□□ -0.75
CARMIL3-202ENST00000559694 PHF19Q5T6S3 580 aa10.38□□□□□ -0.75
CARMIL3-202ENST00000559694 IL23RQ5VWK5 629 aa10.38□□□□□ -0.75
CARMIL3-202ENST00000559694 OR52E8Q6IFG1 317 aa10.38□□□□□ -0.75
CARMIL3-202ENST00000559694 KIAA1161Q6NSJ0 714 aa10.38□□□□□ -0.75
CARMIL3-202ENST00000559694 OMA1Q96E52 524 aa10.38□□□□□ -0.75
CARMIL3-202ENST00000559694 OR52E6Q96RD3 313 aa10.38□□□□□ -0.75
CARMIL3-202ENST00000559694 C1orf21Q9H246 121 aa10.38□□□□□ -0.75
CARMIL3-202ENST00000559694 XKR8Q9H6D3 395 aa10.38□□□□□ -0.75
CARMIL3-202ENST00000559694 ACSL5Q9ULC5 683 aa10.38□□□□□ -0.75
CARMIL3-202ENST00000559694 MAPRE3Q9UPY8 281 aa10.38□□□□□ -0.75
CARMIL3-202ENST00000559694 COLQQ9Y215 455 aaPredicted RBP10.38□□□□□ -0.75
CARMIL3-202ENST00000559694 HS3ST2Q9Y278 367 aa10.38□□□□□ -0.75
CARMIL3-202ENST00000559694 TPRKBQ9Y3C4 175 aa10.38□□□□□ -0.75
CARMIL3-202ENST00000559694 ZNF780BQ9Y6R6 833 aa10.38□□□□□ -0.75
CARMIL3-202ENST00000559694 DGKBQ9Y6T7 804 aa10.38□□□□□ -0.75
CARMIL3-202ENST00000559694 NRP2O60462 931 aa10.38□□□□□ -0.75
CARMIL3-202ENST00000559694 SDC3O75056 442 aa10.38□□□□□ -0.75
CARMIL3-202ENST00000559694 NADKO95544 446 aaPredicted RBP10.38□□□□□ -0.75
CARMIL3-202ENST00000559694 PENKP01210 267 aaPredicted RBP10.38□□□□□ -0.75
CARMIL3-202ENST00000559694 TIMP2P16035 220 aa10.38□□□□□ -0.75
CARMIL3-202ENST00000559694 AOC1P19801 751 aa10.38□□□□□ -0.75
CARMIL3-202ENST00000559694 ACRV1P26436 265 aa10.38□□□□□ -0.75
CARMIL3-202ENST00000559694 CCT8P50990 548 aa10.38□□□□□ -0.75
CARMIL3-202ENST00000559694 CYP4F3Q08477 520 aa10.38□□□□□ -0.75
CARMIL3-202ENST00000559694 LAPTM5Q13571 262 aa10.38□□□□□ -0.75
CARMIL3-202ENST00000559694 SPANXN2Q5MJ10 180 aa10.38□□□□□ -0.75
CARMIL3-202ENST00000559694 CXorf57Q6NSI4 855 aaKnown RBP10.38□□□□□ -0.75
CARMIL3-202ENST00000559694 LIPIQ6XZB0 460 aa10.38□□□□□ -0.75
CARMIL3-202ENST00000559694 EID3Q8N140 333 aa10.38□□□□□ -0.75
CARMIL3-202ENST00000559694 VPS33AQ96AX1 596 aa10.38□□□□□ -0.75
CARMIL3-202ENST00000559694 ELSPBP1Q96BH3 223 aa10.38□□□□□ -0.75
CARMIL3-202ENST00000559694 KLF11O14901 512 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms