RNA–Protein interactions for RNA: ENST00000558958.1

CLPX-203, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 1 (best)

Gene CLPX, Length 1,493 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-203ENST00000558958 SPEM2Q0P670 501 aa17.47■□□□□ 0.39
CLPX-203ENST00000558958 BIRC2Q13490 618 aa17.47■□□□□ 0.39
CLPX-203ENST00000558958 RBBP7Q16576 425 aa17.47■□□□□ 0.39
CLPX-203ENST00000558958 PRAMEF13Q5VWM6 474 aa17.47■□□□□ 0.39
CLPX-203ENST00000558958 LCTLQ6UWM7 567 aa17.47■□□□□ 0.39
CLPX-203ENST00000558958 CUZD1Q86UP6 607 aa17.47■□□□□ 0.39
CLPX-203ENST00000558958 ZNF761Q86XN6 746 aaPredicted RBP17.47■□□□□ 0.39
CLPX-203ENST00000558958 LRRC34Q8IZ02 419 aa17.47■□□□□ 0.39
CLPX-203ENST00000558958 EID2Q8N6I1 236 aa17.47■□□□□ 0.39
CLPX-203ENST00000558958 OR52B6Q8NGF0 335 aa17.47■□□□□ 0.39
CLPX-203ENST00000558958 AGAP11Q8TF27 550 aa17.47■□□□□ 0.39
CLPX-203ENST00000558958 HAUS8Q9BT25 410 aa17.47■□□□□ 0.39
CLPX-203ENST00000558958 TBC1D10AQ9BXI6 508 aa17.47■□□□□ 0.39
CLPX-203ENST00000558958 SHCBP1LQ9BZQ2 653 aa17.47■□□□□ 0.39
CLPX-203ENST00000558958 ILKAPQ9H0C8 392 aaPredicted RBP17.47■□□□□ 0.39
CLPX-203ENST00000558958 PCBD2Q9H0N5 130 aa17.47■□□□□ 0.39
CLPX-203ENST00000558958 SEMA4GQ9NTN9 838 aa17.47■□□□□ 0.39
CLPX-203ENST00000558958 ABCF3Q9NUQ8 709 aa17.47■□□□□ 0.39
CLPX-203ENST00000558958 GPRC5BQ9NZH0 403 aa17.47■□□□□ 0.39
CLPX-203ENST00000558958 HAO1Q9UJM8 370 aa17.47■□□□□ 0.39
CLPX-203ENST00000558958 STK38LQ9Y2H1 464 aa17.47■□□□□ 0.39
CLPX-203ENST00000558958 EPB41L3Q9Y2J2 1087 aaPredicted RBP17.47■□□□□ 0.39
CLPX-203ENST00000558958 RAP2CQ9Y3L5 183 aa17.47■□□□□ 0.39
CLPX-203ENST00000558958 KCNE2Q9Y6J6 123 aa17.47■□□□□ 0.39
CLPX-203ENST00000558958 RNF215Q9Y6U7 377 aa17.47■□□□□ 0.39
CLPX-203ENST00000558958 GMNCA6NCL1 334 aa17.46■□□□□ 0.39
CLPX-203ENST00000558958 SRRM3A6NNA2 597 aaPredicted RBP17.46■□□□□ 0.39
CLPX-203ENST00000558958 RHPN2P1A8MT19 583 aa17.46■□□□□ 0.39
CLPX-203ENST00000558958 LRP3O75074 770 aa17.46■□□□□ 0.39
CLPX-203ENST00000558958 OTCP00480 354 aa17.46■□□□□ 0.39
CLPX-203ENST00000558958 PRDX3P30048 256 aaKnown RBP17.46■□□□□ 0.39
CLPX-203ENST00000558958 PEBP1P30086 187 aaKnown RBP17.46■□□□□ 0.39
CLPX-203ENST00000558958 PCDH1Q08174 1060 aa17.46■□□□□ 0.39
CLPX-203ENST00000558958 TRAF3Q13114 568 aa17.46■□□□□ 0.39
CLPX-203ENST00000558958 PRKAA1Q13131 559 aa17.46■□□□□ 0.39
CLPX-203ENST00000558958 SUZ12Q15022 739 aaKnown RBP17.46■□□□□ 0.39
CLPX-203ENST00000558958 THEMIS2Q5TEJ8 643 aa17.46■□□□□ 0.39
CLPX-203ENST00000558958 DBX2Q6ZNG2 339 aa17.46■□□□□ 0.39
CLPX-203ENST00000558958 ZNF438Q7Z4V0 828 aa17.46■□□□□ 0.39
CLPX-203ENST00000558958 ATP6V1E2Q96A05 226 aa17.46■□□□□ 0.39
CLPX-203ENST00000558958 APOLD1Q96LR9 279 aa17.46■□□□□ 0.39
CLPX-203ENST00000558958 SLC38A3Q99624 504 aa17.46■□□□□ 0.39
CLPX-203ENST00000558958 NTMT1Q9BV86 223 aa17.46■□□□□ 0.39
CLPX-203ENST00000558958 TNFRSF12AQ9NP84 129 aa17.46■□□□□ 0.39
CLPX-203ENST00000558958 MID1IP1Q9NPA3 183 aa17.46■□□□□ 0.39
CLPX-203ENST00000558958 FGFR1OP2Q9NVK5 253 aa17.46■□□□□ 0.39
CLPX-203ENST00000558958 SPHK1Q9NYA1 384 aa17.46■□□□□ 0.39
CLPX-203ENST00000558958 LRIT1Q9P2V4 623 aa17.46■□□□□ 0.39
CLPX-203ENST00000558958 NCDNQ9UBB6 729 aa17.46■□□□□ 0.39
CLPX-203ENST00000558958 TAC3Q9UHF0 121 aa17.46■□□□□ 0.39
CLPX-203ENST00000558958 ZDHHC2Q9UIJ5 367 aa17.46■□□□□ 0.39
CLPX-203ENST00000558958 ZNF225Q9UK10 706 aa17.46■□□□□ 0.39
CLPX-203ENST00000558958 PADI4Q9UM07 663 aa17.46■□□□□ 0.39
CLPX-203ENST00000558958 RALGAPA1Q6GYQ0 2036 aa17.46■□□□□ 0.39
CLPX-203ENST00000558958 OTOGLQ3ZCN5 2332 aa17.45■□□□□ 0.38
CLPX-203ENST00000558958 LY6G6EA0A0G2JKS1 128 aa17.45■□□□□ 0.38
CLPX-203ENST00000558958 OR6C74A6NCV1 312 aa17.45■□□□□ 0.38
CLPX-203ENST00000558958 CDX4O14627 284 aaPredicted RBP17.45■□□□□ 0.38
CLPX-203ENST00000558958 ESRRBO95718 433 aa17.45■□□□□ 0.38
CLPX-203ENST00000558958 GLB1P16278 677 aa17.45■□□□□ 0.38
CLPX-203ENST00000558958 GNAZP19086 355 aa17.45■□□□□ 0.38
CLPX-203ENST00000558958 MPSTP25325 297 aa17.45■□□□□ 0.38
CLPX-203ENST00000558958 PSMB5P28074 263 aa17.45■□□□□ 0.38
CLPX-203ENST00000558958 CCNG1P51959 295 aa17.45■□□□□ 0.38
CLPX-203ENST00000558958 PKNOX1P55347 436 aa17.45■□□□□ 0.38
CLPX-203ENST00000558958 ERVPABLB-1P60509 514 aa17.45■□□□□ 0.38
CLPX-203ENST00000558958 KIR2DS3Q14952 304 aa17.45■□□□□ 0.38
CLPX-203ENST00000558958 CSRP2Q16527 193 aa17.45■□□□□ 0.38
CLPX-203ENST00000558958 GPRIN3Q6ZVF9 776 aa17.45■□□□□ 0.38
CLPX-203ENST00000558958 SYVN1Q86TM6 617 aa17.45■□□□□ 0.38
CLPX-203ENST00000558958 CRLF3Q8IUI8 442 aa17.45■□□□□ 0.38
CLPX-203ENST00000558958 ZNF781Q8N8C0 355 aa17.45■□□□□ 0.38
CLPX-203ENST00000558958 OR2A1Q8NGT9 310 aa17.45■□□□□ 0.38
CLPX-203ENST00000558958 NEIL2Q969S2 332 aa17.45■□□□□ 0.38
CLPX-203ENST00000558958 ACAT2Q9BWD1 397 aa17.45■□□□□ 0.38
CLPX-203ENST00000558958 SH2B3Q9UQQ2 575 aa17.45■□□□□ 0.38
CLPX-203ENST00000558958 DYRK1BQ9Y463 629 aa17.45■□□□□ 0.38
CLPX-203ENST00000558958 PCDHB11Q9Y5F2 797 aa17.45■□□□□ 0.38
CLPX-203ENST00000558958 U3KQA8 63 aa17.45■□□□□ 0.38
CLPX-203ENST00000558958 GOLGA4Q13439 2230 aaKnown RBP17.45■□□□□ 0.38
CLPX-203ENST00000558958 PIPSLA2A3N6 862 aa17.44■□□□□ 0.38
CLPX-203ENST00000558958 E7EQ34 232 aa17.44■□□□□ 0.38
CLPX-203ENST00000558958 PRAMEF4O60810 478 aa17.44■□□□□ 0.38
CLPX-203ENST00000558958 UBXN7O94888 489 aa17.44■□□□□ 0.38
CLPX-203ENST00000558958 EBLN1P0CF75 366 aa17.44■□□□□ 0.38
CLPX-203ENST00000558958 MYF5P13349 255 aa17.44■□□□□ 0.38
CLPX-203ENST00000558958 POLR2CP19387 275 aaPredicted RBP17.44■□□□□ 0.38
CLPX-203ENST00000558958 EPHA4P54764 986 aa17.44■□□□□ 0.38
CLPX-203ENST00000558958 NR0B2Q15466 257 aa17.44■□□□□ 0.38
CLPX-203ENST00000558958 PRAMEF9Q5VWM5 478 aa17.44■□□□□ 0.38
CLPX-203ENST00000558958 LETMD1Q6P1Q0 360 aa17.44■□□□□ 0.38
CLPX-203ENST00000558958 MILR1Q7Z6M3 343 aa17.44■□□□□ 0.38
CLPX-203ENST00000558958 OR4F6Q8NGB9 312 aa17.44■□□□□ 0.38
CLPX-203ENST00000558958 SLC22A18Q96BI1 424 aa17.44■□□□□ 0.38
CLPX-203ENST00000558958 CDK15Q96Q40 435 aa17.44■□□□□ 0.38
CLPX-203ENST00000558958 EPN3Q9H201 632 aa17.44■□□□□ 0.38
CLPX-203ENST00000558958 PARD6AQ9NPB6 346 aa17.44■□□□□ 0.38
CLPX-203ENST00000558958 PNPOQ9NVS9 261 aa17.44■□□□□ 0.38
CLPX-203ENST00000558958 HRASLS2Q9NWW9 162 aa17.44■□□□□ 0.38
CLPX-203ENST00000558958 ENTPD2Q9Y5L3 495 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms