RNA–Protein interactions for RNA: ENST00000558335.5

GABPB1-207, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 3

Gene GABPB1, Length 406 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-207ENST00000558335 CANT1Q8WVQ1 401 aa5.38□□□□□ -1.55
GABPB1-207ENST00000558335 CYGBQ8WWM9 190 aa5.38□□□□□ -1.55
GABPB1-207ENST00000558335 NDRG1Q92597 394 aaKnown RBP5.38□□□□□ -1.55
GABPB1-207ENST00000558335 TMEM125Q96AQ2 219 aa5.38□□□□□ -1.55
GABPB1-207ENST00000558335 PHF21AQ96BD5 680 aa5.38□□□□□ -1.55
GABPB1-207ENST00000558335 PLD4Q96BZ4 506 aa5.38□□□□□ -1.55
GABPB1-207ENST00000558335 NXPE2Q96DL1 559 aa5.38□□□□□ -1.55
GABPB1-207ENST00000558335 CDKN2AIPNLQ96HQ2 116 aa5.38□□□□□ -1.55
GABPB1-207ENST00000558335 RIPOR3Q96MK2 946 aa5.38□□□□□ -1.55
GABPB1-207ENST00000558335 ATOH8Q96SQ7 321 aa5.38□□□□□ -1.55
GABPB1-207ENST00000558335 SEMA3CQ99985 751 aa5.38□□□□□ -1.55
GABPB1-207ENST00000558335 MGME1Q9BQP7 344 aa5.38□□□□□ -1.55
GABPB1-207ENST00000558335 FEM1AQ9BSK4 669 aa5.38□□□□□ -1.55
GABPB1-207ENST00000558335 ZNF700Q9H0M5 742 aa5.38□□□□□ -1.55
GABPB1-207ENST00000558335 SEMA6AQ9H2E6 1030 aa5.38□□□□□ -1.55
GABPB1-207ENST00000558335 ZFYVE28Q9HCC9 887 aa5.38□□□□□ -1.55
GABPB1-207ENST00000558335 PCDHB16Q9NRJ7 776 aa5.38□□□□□ -1.55
GABPB1-207ENST00000558335 EXD2Q9NVH0 621 aa5.38□□□□□ -1.55
GABPB1-207ENST00000558335 POLR3BQ9NW08 1133 aaPredicted RBP5.38□□□□□ -1.55
GABPB1-207ENST00000558335 HPF1Q9NWY4 346 aa5.38□□□□□ -1.55
GABPB1-207ENST00000558335 UCKL1Q9NWZ5 548 aa5.38□□□□□ -1.55
GABPB1-207ENST00000558335 SCN3BQ9NY72 215 aa5.38□□□□□ -1.55
GABPB1-207ENST00000558335 MARCH2Q9P0N8 246 aa5.38□□□□□ -1.55
GABPB1-207ENST00000558335 HECAQ9UBI9 543 aaPredicted RBP5.38□□□□□ -1.55
GABPB1-207ENST00000558335 PACSIN3Q9UKS6 424 aa5.38□□□□□ -1.55
GABPB1-207ENST00000558335 CORO2BQ9UQ03 480 aa5.38□□□□□ -1.55
GABPB1-207ENST00000558335 NEU3Q9UQ49 428 aa5.38□□□□□ -1.55
GABPB1-207ENST00000558335 ERVW-1Q9UQF0 538 aa5.38□□□□□ -1.55
GABPB1-207ENST00000558335 ENTPD4Q9Y227 616 aa5.38□□□□□ -1.55
GABPB1-207ENST00000558335 TPRKBQ9Y3C4 175 aa5.38□□□□□ -1.55
GABPB1-207ENST00000558335 RNF11Q9Y3C5 154 aa5.38□□□□□ -1.55
GABPB1-207ENST00000558335 FIS1Q9Y3D6 152 aa5.38□□□□□ -1.55
GABPB1-207ENST00000558335 PKP3Q9Y446 797 aa5.38□□□□□ -1.55
GABPB1-207ENST00000558335 NLRC5Q86WI3 1866 aa5.38□□□□□ -1.55
GABPB1-207ENST00000558335 NYNRINQ9P2P1 1898 aaKnown RBP5.38□□□□□ -1.55
GABPB1-207ENST00000558335 MICAL3Q7RTP6 2002 aa5.38□□□□□ -1.55
GABPB1-207ENST00000558335 NUP205Q92621 2012 aa5.38□□□□□ -1.55
GABPB1-207ENST00000558335 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP5.37□□□□□ -1.55
GABPB1-207ENST00000558335 A0A1W2PQH9 124 aa5.37□□□□□ -1.55
GABPB1-207ENST00000558335 UBA6A0AVT1 1052 aaPredicted RBP5.37□□□□□ -1.55
GABPB1-207ENST00000558335 TMEM82A0PJX8 343 aa5.37□□□□□ -1.55
GABPB1-207ENST00000558335 C7orf72A4D263 438 aa5.37□□□□□ -1.55
GABPB1-207ENST00000558335 HMX3A6NHT5 357 aa5.37□□□□□ -1.55
GABPB1-207ENST00000558335 CASTOR2A6NHX0 329 aa5.37□□□□□ -1.55
GABPB1-207ENST00000558335 G3V2T6 193 aa5.37□□□□□ -1.55
GABPB1-207ENST00000558335 H3BUI4 141 aa5.37□□□□□ -1.55
GABPB1-207ENST00000558335 PPM1DO15297 605 aa5.37□□□□□ -1.55
GABPB1-207ENST00000558335 STX7O15400 261 aaKnown RBP5.37□□□□□ -1.55
GABPB1-207ENST00000558335 INSIG1O15503 277 aa5.37□□□□□ -1.55
GABPB1-207ENST00000558335 HCRTO43612 131 aa5.37□□□□□ -1.55
GABPB1-207ENST00000558335 KDELR3O43731 214 aa5.37□□□□□ -1.55
GABPB1-207ENST00000558335 SYNCRIPO60506 623 aaKnown RBP5.37□□□□□ -1.55
GABPB1-207ENST00000558335 GREM1O60565 184 aa5.37□□□□□ -1.55
GABPB1-207ENST00000558335 PRMT3O60678 531 aa5.37□□□□□ -1.55
GABPB1-207ENST00000558335 LILRB3O75022 631 aa5.37□□□□□ -1.55
GABPB1-207ENST00000558335 PDE9AO76083 593 aa5.37□□□□□ -1.55
GABPB1-207ENST00000558335 SORBS2O94875 1100 aaKnown RBP5.37□□□□□ -1.55
GABPB1-207ENST00000558335 PRSS23O95084 383 aa5.37□□□□□ -1.55
GABPB1-207ENST00000558335 PTTG1O95997 202 aa5.37□□□□□ -1.55
GABPB1-207ENST00000558335 MOCS2O96007 188 aaPredicted RBP5.37□□□□□ -1.55
GABPB1-207ENST00000558335 PEX11BO96011 259 aa5.37□□□□□ -1.55
GABPB1-207ENST00000558335 GOT2P00505 430 aaKnown RBP5.37□□□□□ -1.55
GABPB1-207ENST00000558335 IGLV3-27P01718 113 aa5.37□□□□□ -1.55
GABPB1-207ENST00000558335 ATXN1LP0C7T5 689 aaKnown RBP5.37□□□□□ -1.55
GABPB1-207ENST00000558335 THRBP10828 461 aa5.37□□□□□ -1.55
GABPB1-207ENST00000558335 PRPS2P11908 318 aa5.37□□□□□ -1.55
GABPB1-207ENST00000558335 ICAM2P13598 275 aa5.37□□□□□ -1.55
GABPB1-207ENST00000558335 POU2F1P14859 743 aa5.37□□□□□ -1.55
GABPB1-207ENST00000558335 ITGALP20701 1170 aa5.37□□□□□ -1.55
GABPB1-207ENST00000558335 TGM1P22735 817 aa5.37□□□□□ -1.55
GABPB1-207ENST00000558335 EEF1B2P24534 225 aaKnown RBP5.37□□□□□ -1.55
GABPB1-207ENST00000558335 S100PP25815 95 aa5.37□□□□□ -1.55
GABPB1-207ENST00000558335 HSD3B2P26439 372 aa5.37□□□□□ -1.55
GABPB1-207ENST00000558335 CD40LGP29965 261 aa5.37□□□□□ -1.55
GABPB1-207ENST00000558335 RYKP34925 604 aa5.37□□□□□ -1.55
GABPB1-207ENST00000558335 GNALP38405 381 aa5.37□□□□□ -1.55
GABPB1-207ENST00000558335 HNF4AP41235 474 aa5.37□□□□□ -1.55
GABPB1-207ENST00000558335 GSK3BP49841 420 aa5.37□□□□□ -1.55
GABPB1-207ENST00000558335 ERFP50548 548 aa5.37□□□□□ -1.55
GABPB1-207ENST00000558335 PLK1P53350 603 aa5.37□□□□□ -1.55
GABPB1-207ENST00000558335 ARSFP54793 590 aa5.37□□□□□ -1.55
GABPB1-207ENST00000558335 AP1S1P61966 158 aa5.37□□□□□ -1.55
GABPB1-207ENST00000558335 SH3BP2P78314 561 aa5.37□□□□□ -1.55
GABPB1-207ENST00000558335 ADARB1P78563 741 aaKnown RBP5.37□□□□□ -1.55
GABPB1-207ENST00000558335 GALK2Q01415 458 aa5.37□□□□□ -1.55
GABPB1-207ENST00000558335 CACNG1Q06432 222 aa5.37□□□□□ -1.55
GABPB1-207ENST00000558335 KHDRBS1Q07666 443 aaKnown RBP eCLIP5.37□□□□□ -1.55
GABPB1-207ENST00000558335 VAC14Q08AM6 782 aa5.37□□□□□ -1.55
GABPB1-207ENST00000558335 ZNF177Q13360 481 aaPredicted RBP5.37□□□□□ -1.55
GABPB1-207ENST00000558335 CBX2Q14781 532 aaPredicted RBP5.37□□□□□ -1.55
GABPB1-207ENST00000558335 ACOX1Q15067 660 aa5.37□□□□□ -1.55
GABPB1-207ENST00000558335 TAF1CQ15572 869 aaPredicted RBP5.37□□□□□ -1.55
GABPB1-207ENST00000558335 GPR33Q49SQ1 333 aa5.37□□□□□ -1.55
GABPB1-207ENST00000558335 VPS26BQ4G0F5 336 aa5.37□□□□□ -1.55
GABPB1-207ENST00000558335 KLHL12Q53G59 568 aa5.37□□□□□ -1.55
GABPB1-207ENST00000558335 MS4A13Q5J8X5 152 aa5.37□□□□□ -1.55
GABPB1-207ENST00000558335 PXDC1Q5TGL8 231 aa5.37□□□□□ -1.55
GABPB1-207ENST00000558335 KIAA0319Q5VV43 1072 aa5.37□□□□□ -1.55
GABPB1-207ENST00000558335 SPRYD7Q5W111 196 aa5.37□□□□□ -1.55
GABPB1-207ENST00000558335 ATG9BQ674R7 924 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms